Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	USP47	Gene	0	111.37	107.36	255.44	267.04	70.12	237.64	69.43
2	339865	Transcript	0	13.06	11.92	25.19	21.07	3.36	20.51	2.88
3	379636	Transcript	0	5.91	7.12	10.91	17.09	0.00	16.56	7.47
4	305481	Transcript	0	83.70	96.68	136.91	196.09	36.68	162.62	40.96
5	399455	Transcript	0	0	0	0	0	0	0	0
6	ER1a	ExonRegion	0	0.63	1.43	0.87	1.20	0.22	5.05	0.74
7	E1_Ab	KnownBoundary	0	0.77	2.92	0.85	1.08	0.95	8.58	1.39
8	ER1b	ExonRegion	0	31.59	49.07	45.35	104.19	12.35	90.79	13.80
9	E1a_E2a	KnownJunction	0	5.91	7.12	10.91	17.09	0.00	16.56	7.47
10	E1a_E3a	KnownJunction	0	83.70	96.68	136.91	196.09	36.68	162.62	40.96
11	E1a_E4a	KnownJunction	1	25.49	22.41	49.52	40.93	6.50	35.97	5.02
12	ER2a	ExonRegion	0	8.58	4.88	11.63	23.09	0.80	18.04	7.13
13	E2a_E3a	KnownJunction	1	6.38	2.84	12.50	20.37	2.05	16.80	7.07
14	ER3a	ExonRegion	0	104.75	139.45	182.28	277.98	49.98	236.51	58.15
15	E3_Da	KnownBoundary	0	121.02	189.42	185.75	292.58	54.52	282.68	49.97
16	ER3b	ExonRegion	0	155.71	198.79	240.85	327.83	55.46	296.17	65.77
17	E3b_E4a	KnownJunction	0	165.80	229.95	319.32	404.85	53.76	402.59	92.85
18	I3_AR1	ActiveIntronRegion	1	23.93	8.80	18.55	3.14	0.26	2.35	0.42
19	ER4a	ExonRegion	0	235.35	272.78	419.53	473.05	75.01	427.65	101.70
20	E4_Da	NovelBoundary	1	30.68	35.07	30.29	15.04	0.00	9.81	0.59
21	E4a_E5a	KnownJunction	0	177.03	192.57	357.25	421.92	92.81	371.20	109.52
22	E4a_E6a	NovelJunction	1	1.55	0.00	1.25	17.04	0.00	9.41	0.00
23	ER5a	ExonRegion	0	170.63	179.06	368.56	410.63	99.79	385.07	110.52
24	ER5b	ExonRegion	0	165.88	166.91	385.02	395.50	98.20	367.53	106.64
25	ER5c	ExonRegion	0	187.28	146.10	412.85	321.66	83.62	278.58	102.15
26	E5b_E6a	KnownJunction	0	164.06	146.67	405.98	328.75	65.59	322.21	118.33
27	ER6a	ExonRegion	0	166.47	163.88	418.41	356.13	71.88	333.28	109.89
28	E6a_E7a	KnownJunction	0	168.52	176.20	392.89	327.04	77.48	295.31	110.88
29	ER7a	ExonRegion	0	167.70	179.06	397.91	378.52	97.80	312.61	116.83
30	E7a_E8a	KnownJunction	0	159.39	163.38	328.55	358.31	95.85	320.07	129.11
31	ER8a	ExonRegion	0	168.86	196.20	326.70	401.32	111.14	312.34	137.68
32	E8a_E9a	KnownJunction	0	168.27	180.64	318.30	426.52	95.88	318.25	107.08
33	ER9a	ExonRegion	0	176.75	190.98	362.42	438.43	118.20	341.19	143.69
34	E9a_E10a	KnownJunction	0	157.09	150.43	327.76	326.72	128.06	317.68	117.12
35	ER10a	ExonRegion	0	140.22	144.15	311.37	330.22	108.48	266.68	113.92
36	E10a_E11a	KnownJunction	0	139.61	123.74	299.33	263.38	102.19	222.79	92.67
37	ER11a	ExonRegion	0	160.74	147.37	351.71	347.90	91.80	288.05	107.76
38	E11a_E12a	KnownJunction	0	160.04	155.74	331.94	375.18	82.23	265.16	99.39
39	ER12a	ExonRegion	0	166.98	184.62	385.91	405.54	97.59	357.98	129.41
40	E12a_E13a	KnownJunction	0	156.52	187.68	366.86	352.54	90.00	302.78	110.34
41	ER13a	ExonRegion	0	142.45	156.43	370.59	348.43	87.09	278.02	128.82
42	E13a_E14a	KnownJunction	0	119.25	138.03	311.74	338.34	102.35	260.79	115.96
43	ER14a	ExonRegion	0	105.85	134.99	349.40	325.12	88.72	264.11	116.61
44	E14a_E15a	KnownJunction	0	105.71	140.53	304.16	348.61	70.77	282.52	106.45
45	ER15a	ExonRegion	0	112.14	157.24	332.47	359.57	76.89	280.23	108.96
46	E15a_E16a	KnownJunction	0	98.29	123.66	311.30	315.23	99.77	225.95	105.65
47	E15a_E17a	NovelJunction	1	31.84	7.38	24.90	11.46	0.00	3.24	0.00
48	ER16a	ExonRegion	0	148.87	129.25	373.57	318.95	106.38	268.37	119.22
49	E16a_E17a	KnownJunction	0	191.62	143.44	354.80	315.39	156.14	241.22	107.79
50	ER17a	ExonRegion	0	243.67	174.41	466.87	400.03	132.95	341.54	121.20
51	E17a_E18a	KnownJunction	0	257.71	207.94	499.89	441.53	148.69	345.64	120.91
52	ER18a	ExonRegion	0	211.04	153.49	401.93	358.73	120.88	291.70	100.18
53	E18a_E19a	KnownJunction	0	144.57	130.20	329.80	324.31	105.90	203.28	81.03
54	ER19a	ExonRegion	0	154.16	158.65	330.98	380.99	97.85	268.28	97.44
55	E19a_E20a	KnownJunction	0	184.22	154.13	356.01	374.26	105.88	283.43	99.59
56	ER20a	ExonRegion	0	215.75	173.24	434.67	420.25	103.04	306.08	106.54
57	E20a_E21a	KnownJunction	0	196.47	144.39	377.75	371.77	100.72	320.23	87.49
58	ER21a	ExonRegion	0	171.13	189.75	379.40	408.56	115.70	358.85	118.03
59	E21_Da	NovelBoundary	0	23.20	36.44	58.36	61.25	2.19	30.31	5.73
60	E21a_E22a	KnownJunction	0	153.81	190.89	330.85	410.59	107.93	406.26	123.52
61	I21_AR1	ActiveIntronRegion	1	22.54	14.51	60.40	30.03	0.94	24.43	2.65
62	I21_SR1	SilentIntronRegion	0	23.92	13.55	40.87	22.12	1.55	12.45	4.43
63	ER22a	ExonRegion	0	204.71	191.14	420.54	487.00	133.87	451.81	125.52
64	E22a_E23a	KnownJunction	0	216.44	188.63	359.43	531.23	153.07	493.38	122.61
65	ER23a	ExonRegion	0	195.08	186.82	382.01	487.36	103.57	436.17	127.23
66	E23a_E24a	KnownJunction	0	155.98	174.65	374.39	500.97	110.45	443.27	127.13
67	ER24a	ExonRegion	0	194.50	163.71	360.20	425.99	110.15	416.98	119.17
68	E24a_E25a	KnownJunction	0	179.77	152.30	351.34	443.62	110.40	397.57	117.89
69	ER25a	ExonRegion	0	230.41	145.86	408.54	426.49	131.88	447.75	122.70
70	E25_Da	NovelBoundary	1	53.71	6.88	58.79	19.70	0.00	12.22	2.22
71	E25a_E26a	KnownJunction	0	223.44	125.47	389.65	409.48	140.65	353.60	108.55
72	I25_AR1	ActiveIntronRegion	1	29.05	6.69	46.27	11.67	1.38	10.40	2.51
73	I25_SR1	SilentIntronRegion	0	30.78	6.88	46.04	18.09	1.29	4.98	3.27
74	ER26a	ExonRegion	0	195.85	160.89	368.20	435.02	122.57	430.26	117.06
75	E26a_E27a	KnownJunction	0	178.23	177.94	327.49	411.46	136.80	440.94	95.46
76	ER27a	ExonRegion	0	247.13	195.06	439.30	468.10	129.71	482.69	119.71
77	E27a_E28a	KnownJunction	0	229.64	156.39	408.16	450.15	136.86	380.10	108.23
78	ER28a	ExonRegion	0	332.92	236.02	553.19	613.03	159.24	621.04	130.98
79	E28a_E29a	KnownJunction	0	374.72	270.62	583.61	680.56	119.02	708.67	125.03
80	ER29a	ExonRegion	0	241.41	209.99	385.40	480.70	114.75	543.98	98.94
81	E29_Da	KnownBoundary	0	84.38	221.28	108.19	542.42	50.35	765.86	23.69
82	ER29b	ExonRegion	1	28.24	28.73	142.73	128.92	35.11	105.35	24.44