Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	WEE1	Gene	0	712.52	774.30	422.61	461.91	318.36	287.21	35.93
2	299613	Transcript	0	1067.11	1262.05	696.04	729.78	503.87	443.41	57.00
3	ER1a	ExonRegion	0	22.12	121.84	11.84	58.88	6.69	33.95	1.46
4	E1a_E2a	KnownJunction	0	363.91	692.52	225.70	323.01	176.72	225.79	12.25
5	I1_AR2	ActiveIntronRegion	1	109.23	38.10	73.69	26.93	3.31	13.35	8.72
6	ER2a	ExonRegion	0	764.56	1195.01	553.28	601.75	250.57	386.53	39.34
7	E2a_E3a	KnownJunction	0	744.05	1213.06	531.72	635.21	345.52	451.42	32.76
8	ER3a	ExonRegion	0	1027.72	1313.22	675.18	657.50	367.31	443.33	43.71
9	E3a_E4a	KnownJunction	0	1146.60	1251.31	716.48	675.44	411.59	394.22	52.68
10	ER4a	ExonRegion	0	1353.39	1343.90	888.88	813.00	485.64	447.42	60.49
11	E4a_E5a	KnownJunction	0	1257.22	1418.16	854.49	860.39	366.10	507.64	61.77
12	ER5a	ExonRegion	0	1242.41	1369.51	827.88	802.57	576.47	439.36	64.84
13	E5_Da	NovelBoundary	0	299.98	174.78	243.55	117.25	12.43	9.30	8.47
14	E5a_E6a	KnownJunction	0	1009.52	1141.76	608.01	613.32	567.01	350.59	55.63
15	E5a_E7a	NovelJunction	0	4.11	1.39	1.70	4.12	0.00	9.67	0.00
16	I5	Intron	1	397.57	211.34	311.37	110.72	16.67	31.96	13.35
17	I5_AR1	ActiveIntronRegion	1	398.07	211.60	311.74	110.86	16.69	32.00	13.36
18	I5	Intron	0	328.34	95.45	212.31	59.48	13.39	16.00	8.71
19	I5_AR1	ActiveIntronRegion	0	421.01	92.07	263.59	59.19	15.15	18.14	7.79
20	I5_AR2	ActiveIntronRegion	0	256.69	98.07	172.66	59.70	12.04	14.34	9.43
21	I5	Intron	0	397.32	93.67	187.50	61.95	16.05	20.20	7.47
22	I5_AR1	ActiveIntronRegion	0	398.66	93.95	188.11	62.16	16.10	20.28	7.50
23	E6_Aa	NovelBoundary	1	502.03	175.20	296.49	88.89	22.98	29.77	9.37
24	ER6a	ExonRegion	0	1243.00	1406.28	769.09	763.56	655.52	437.31	74.09
25	E6_Da	NovelBoundary	1	842.11	117.20	530.91	56.76	23.65	21.23	7.85
26	E6a_E7a	KnownJunction	0	1383.35	1306.19	880.73	784.83	733.77	455.44	64.98
27	I6_SR2	SilentIntronRegion	0	199.07	92.12	97.36	28.48	16.04	11.93	5.23
28	E7_Aa	NovelBoundary	0	304.09	115.23	179.20	51.85	16.39	21.47	9.90
29	ER7a	ExonRegion	0	1332.24	1605.42	867.90	963.58	634.52	546.19	70.49
30	E7_Da	NovelBoundary	0	193.32	52.39	69.83	34.78	5.30	0.00	7.11
31	E7a_E8a	KnownJunction	0	1375.27	1575.87	805.69	966.18	739.00	570.25	74.78
32	E8_Aa	NovelBoundary	0	192.55	52.10	78.97	28.12	0.99	2.63	5.29
33	ER8a	ExonRegion	0	1349.41	1611.58	864.76	955.20	676.99	581.99	78.05
34	E8_Da	NovelBoundary	0	192.33	27.53	99.04	17.23	1.11	4.72	3.12
35	E8a_E9a	KnownJunction	0	1173.92	1448.90	795.57	846.65	759.06	523.88	68.89
36	I8	Intron	0	157.83	37.09	97.73	18.48	4.92	5.83	5.74
37	I8_AR1	ActiveIntronRegion	0	187.65	46.14	124.36	20.53	5.14	8.15	6.58
38	ER9a	ExonRegion	0	967.53	1351.97	701.00	781.59	580.33	465.66	66.22
39	E9a_E10a	KnownJunction	0	831.23	1164.14	635.87	677.68	546.21	457.18	60.12
40	ER10a	ExonRegion	0	1230.52	1358.36	839.10	865.95	685.01	483.85	73.00
41	E10a_E11a	KnownJunction	0	1366.49	1533.33	916.99	987.09	486.65	648.55	84.70
42	ER11a	ExonRegion	0	1224.83	1080.68	646.71	691.99	530.52	461.13	56.69
43	IG36_AR1	ActiveIntergenicRegion	0	40.51	6.58	11.86	9.65	13.94	2.01	2.76
44	IG36_SR1	SilentIntergenicRegion	0	24.75	4.76	10.45	7.87	5.47	7.29	1.86
45	IG36_AR2	ActiveIntergenicRegion	0	22.99	9.48	10.47	11.65	2.10	9.77	1.51