Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ST5	Gene	0	468.29	285.27	442.28	282.74	68.11	146.97	72.27
2	396665	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	357665	Transcript	0	0	0	0	0	0	0	0
4	353815	Transcript	0	39.47	4.10	64.94	7.23	25.29	5.09	5.33
5	313726	Transcript	1	136.35	167.72	263.60	177.38	9.93	64.14	29.55
6	ER1a	ExonRegion	0	35.21	12.20	14.36	3.20	2.38	5.54	2.48
7	E1a_E2a	KnownJunction	1	105.93	50.91	37.18	9.08	5.42	15.57	7.70
8	ER2a	ExonRegion	1	116.82	51.15	48.03	16.67	20.85	27.76	10.85
9	E2a_E4a	KnownJunction	1	113.07	54.59	53.60	24.44	30.43	31.49	12.50
10	ER3a	ExonRegion	0	180.68	151.77	279.00	178.43	15.44	67.86	32.81
11	E3a_E4a	KnownJunction	1	92.01	183.66	248.20	176.34	4.43	60.41	26.28
12	E3a_E5a	NovelJunction	0	3.04	30.16	23.75	39.47	0.00	11.63	1.48
13	ER4a	ExonRegion	0	467.02	280.56	557.94	273.16	50.06	169.79	81.77
14	E4a_E5a	KnownJunction	0	436.09	241.64	493.35	268.31	59.98	160.10	76.83
15	E4a_E6a	KnownJunction	0	39.47	4.10	64.94	7.23	25.29	5.09	5.33
16	ER5a	ExonRegion	0	187.05	219.78	214.10	188.29	19.00	101.39	34.60
17	E5_Da	KnownBoundary	0	348.07	359.26	341.32	292.15	35.78	157.13	62.86
18	E5a_E22b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER5b	ExonRegion	0	432.24	365.44	454.78	330.69	46.10	169.07	70.22
20	E5b_E6a	KnownJunction	0	640.73	388.42	590.42	363.48	68.37	175.22	99.98
21	ER6a	ExonRegion	0	768.97	428.76	826.75	441.73	98.86	229.23	121.94
22	E6a_E7a	KnownJunction	0	618.73	424.42	684.99	392.58	98.07	231.52	95.93
23	ER7a	ExonRegion	0	752.81	400.95	747.88	417.16	122.96	230.25	140.98
24	E7a_E8a	KnownJunction	0	371.53	358.18	347.95	239.40	63.99	146.27	98.71
25	E7a_E9a	NovelJunction	1	12.87	2.68	26.41	20.13	0.00	11.36	0.83
26	E7a_E22b	NovelJunction	0	196.62	131.41	229.12	117.74	27.36	78.01	27.62
27	ER8a	ExonRegion	0	331.26	335.30	304.77	280.68	69.50	147.97	83.55
28	E8a_E9a	KnownJunction	0	449.09	250.37	351.89	197.25	52.12	115.37	81.75
29	ER9a	ExonRegion	0	544.19	280.64	439.64	245.36	80.33	122.35	84.57
30	E9a_E10a	KnownJunction	0	700.73	258.01	577.37	217.11	99.45	162.97	88.21
31	E9a_E11a	NovelJunction	1	44.76	8.72	24.07	32.73	3.16	20.10	0.00
32	ER10a	ExonRegion	0	739.68	303.28	619.53	274.03	104.04	166.93	104.14
33	E10a_E11a	KnownJunction	0	584.65	273.04	504.01	250.02	84.88	120.89	91.41
34	ER11a	ExonRegion	0	571.42	278.83	473.23	264.07	70.56	111.61	77.96
35	E11a_E12a	KnownJunction	0	516.99	272.93	452.98	264.35	81.38	88.68	76.86
36	E11a_E13a	NovelJunction	0	19.19	4.28	12.89	11.62	1.98	9.11	0.00
37	ER12a	ExonRegion	0	417.79	249.74	411.04	230.44	73.56	90.84	72.53
38	E12a_E13a	KnownJunction	0	373.37	237.78	398.25	156.45	51.06	62.01	75.84
39	ER13a	ExonRegion	0	337.53	257.39	378.99	172.62	58.01	73.40	67.82
40	E13a_E14a	KnownJunction	0	267.04	231.03	311.36	194.79	51.78	85.65	56.24
41	E13a_E15a	NovelJunction	1	31.86	0.00	13.29	9.13	0.00	8.87	0.00
42	ER14a	ExonRegion	0	257.95	235.60	281.35	209.04	49.69	90.88	54.74
43	E14a_E15a	KnownJunction	0	293.06	251.23	280.05	229.73	34.58	98.01	52.51
44	ER15a	ExonRegion	0	452.66	295.18	405.14	293.03	75.65	130.23	78.17
45	E15a_E16a	KnownJunction	0	401.48	236.78	352.07	224.07	107.75	84.20	78.84
46	E15a_E17a	NovelJunction	1	39.47	16.18	26.17	50.66	0.00	25.06	0.00
47	E15a_E18a	NovelJunction	1	3.74	3.26	6.57	22.76	1.18	4.37	4.93
48	ER16a	ExonRegion	0	438.36	290.65	370.64	239.15	79.02	115.08	82.84
49	E16a_E17a	KnownJunction	0	297.87	211.46	268.70	149.19	63.53	75.90	70.78
50	E16a_E18a	NovelJunction	1	6.53	4.60	10.84	14.49	0.00	0.00	1.43
51	E16a_E19a	NovelJunction	1	4.21	0.00	3.20	12.14	0.00	5.79	0.00
52	E17_Aa	NovelBoundary	0	126.08	29.11	132.95	35.38	3.37	8.31	10.00
53	ER17a	ExonRegion	0	403.77	321.02	378.94	309.22	89.76	122.05	82.05
54	E17a_E18a	KnownJunction	0	311.83	256.59	286.11	244.80	51.27	93.58	46.33
55	ER18a	ExonRegion	0	369.97	335.50	374.92	314.98	88.43	125.90	68.33
56	E18a_E19a	KnownJunction	0	341.83	319.51	385.97	305.53	108.39	133.76	73.96
57	ER19a	ExonRegion	0	493.97	384.52	526.03	417.24	101.30	188.66	103.35
58	E19a_E20a	KnownJunction	0	731.29	418.35	669.46	433.02	108.39	190.52	90.06
59	ER20a	ExonRegion	0	846.06	407.44	796.27	474.35	131.08	237.55	102.72
60	E20a_E21a	KnownJunction	0	945.43	419.11	820.42	490.16	195.70	257.84	118.06
61	ER21a	ExonRegion	0	1065.59	428.33	1018.62	539.88	155.55	297.17	126.55
62	E21a_E22a	KnownJunction	0	993.37	456.60	925.67	493.14	114.41	275.64	109.64
63	ER22a	ExonRegion	0	847.42	369.53	737.93	422.60	115.86	246.90	99.07
64	E22_Ab	KnownBoundary	0	720.45	360.26	676.51	368.90	122.64	263.41	83.39
65	ER22b	ExonRegion	0	879.65	347.23	747.38	380.72	139.93	221.33	97.70
66	E22_Da	KnownBoundary	0	1192.05	379.75	980.80	440.12	128.63	225.25	106.53
67	ER22c	ExonRegion	0	712.19	273.23	567.84	318.90	93.10	191.89	86.50
68	IG21	Intergenic	0	10.94	9.18	14.90	7.12	2.46	5.50	7.59
69	IG21_SR1	SilentIntergenicRegion	0	11.06	9.27	15.07	7.20	2.49	5.56	7.67