Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC090587.1	Gene	0	37.26	22.01	14.79	8.45	161.96	6.82	145.36
2	396993	Transcript	0	10.68	6.59	3.14	0.64	32.70	0.82	40.22
3	396991	Transcript	0	0	0	0	0	0	0	0
4	300730	Transcript	0	17.22	10.06	9.64	5.85	43.09	7.48	71.20
5	396986	Transcript	0	4.15	4.13	0.68	0.50	2.27	0.49	28.60
6	278243	Transcript	0	1.84	0.00	1.91	1.07	25.92	0.00	0.26
7	ER1a	ExonRegion	0	0.00	2.43	0.00	0.00	0.00	0.00	0.00
8	ER1b	ExonRegion	1	16.89	14.01	2.73	2.10	16.68	1.69	103.20
9	I1_SR3	SilentIntronRegion	0	4.81	8.35	1.33	3.58	1.85	1.89	0.85
10	E2a_E4a	KnownJunction	1	5.26	9.38	0.75	0.00	1.91	1.21	47.82
11	ER2a	ExonRegion	0	4.15	4.13	0.68	0.50	2.27	0.49	28.60
12	ER2b	ExonRegion	1	17.60	16.89	2.48	2.02	7.10	2.57	127.69
13	ER3a	ExonRegion	0	2.90	0.00	2.31	0.67	32.22	0.00	0.52
14	E3a_E4a	KnownJunction	0	0.78	0.00	1.51	1.46	19.62	0.00	0.00
15	E3a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	14.29	0.00	0.89
16	ER4a	ExonRegion	0	13.97	14.57	4.12	8.34	26.56	8.06	68.39
17	E4_Da	NovelBoundary	1	0.77	2.21	0.55	12.08	8.37	4.61	8.89
18	E4a_E5a	KnownJunction	0	0.00	1.21	0.00	0.00	0.00	0.00	0.00
19	E4a_E6a	KnownJunction	0	3.89	5.65	1.62	0.00	11.85	0.00	18.96
20	E4a_E7a	KnownJunction	0	17.22	10.06	9.64	5.85	43.09	7.48	71.20
21	E4a_E8a	NovelJunction	1	0.00	0.00	0.00	0.00	0.95	1.66	12.35
22	E5_Aa	NovelBoundary	0	5.07	2.60	1.28	10.78	9.66	9.89	3.48
23	ER5a	ExonRegion	0	3.65	7.99	3.61	4.12	6.33	5.19	6.84
24	E5_Da	NovelBoundary	0	1.69	8.75	0.00	10.02	0.00	4.53	3.34
25	E5a_E7a	KnownJunction	0	0.68	4.23	4.27	0.00	2.35	1.53	2.69
26	ER6a	ExonRegion	0	5.15	4.63	2.12	0.03	18.98	0.00	25.52
27	E6_Da	NovelBoundary	0	6.29	2.65	1.83	2.60	30.01	8.47	13.06
28	E6a_E7a	KnownJunction	0	2.95	6.75	0.86	0.00	7.24	0.00	15.41
29	ER7a	ExonRegion	0	32.91	29.80	14.68	10.77	128.06	10.19	145.04
30	E7_Da	NovelBoundary	0	3.72	1.23	2.00	10.29	16.23	4.37	9.27
31	E7a_E8a	KnownJunction	1	31.49	25.96	16.76	2.47	206.53	3.00	164.27
32	E8_Aa	NovelBoundary	0	4.31	10.80	3.20	4.12	19.09	3.97	13.93
33	ER8a	ExonRegion	1	38.52	27.85	16.51	4.11	226.87	3.06	210.80
34	E8_Da	NovelBoundary	1	16.51	22.78	10.29	5.66	70.68	5.92	116.01
35	E8a_E9a	KnownJunction	0	21.36	10.75	6.28	1.27	65.40	1.63	80.44
36	E8b_E9a	KnownJunction	1	25.64	21.38	15.68	0.00	209.62	0.00	173.95
37	ER8b	ExonRegion	1	25.87	21.66	14.62	1.04	192.20	1.12	182.14
38	E9_Aa	NovelBoundary	0	10.88	16.26	11.91	3.06	35.66	13.19	14.49
39	ER9a	ExonRegion	0	77.80	31.95	26.21	9.82	374.82	5.26	285.63
40	E9_Da	NovelBoundary	0	3.09	11.61	4.71	8.51	0.00	8.33	3.91
41	E9a_E10a	KnownJunction	0	113.26	32.79	30.36	9.21	395.63	4.34	317.41
42	E10_Aa	NovelBoundary	0	5.07	16.68	9.57	8.94	2.88	3.32	9.03
43	ER10a	ExonRegion	0	54.67	28.06	21.64	11.70	241.58	8.70	200.08
44	E10_Da	KnownBoundary	0	19.96	7.54	8.08	3.98	62.66	9.27	54.86
45	ER10b	ExonRegion	0	10.25	4.06	5.40	1.19	63.17	3.85	30.34
46	ER10c	ExonRegion	0	0.07	1.21	1.68	0.00	4.59	0.00	1.64
47	IG9	Intergenic	0	3.92	5.76	5.42	8.26	0.95	6.30	2.78
48	IG9_SR1	SilentIntergenicRegion	0	3.93	5.78	5.44	8.28	0.95	6.32	2.79