Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PLEKHA1	Gene	0	82.17	51.74	120.19	41.67	118.59	72.85	135.50
2	409427	Transcript	0	9.99	10.98	12.31	5.82	7.42	9.81	13.60
3	368990	Transcript	0	0	0	0	0	0	0	0
4	368988	Transcript	0	0	0	0	0	0	0	0
5	368989	Transcript	0	0.77	0.61	1.35	0.62	4.86	0.00	1.01
6	392799	Transcript	0	18.80	18.22	24.93	12.22	18.01	19.35	25.74
7	ER1a	ExonRegion	1	12.98	15.18	11.75	3.20	9.22	9.40	22.24
8	E1_Da	KnownBoundary	0	0.00	3.26	0.00	0.00	0.00	0.00	0.00
9	E1a_E3a	NovelJunction	0	22.85	12.01	42.00	7.99	12.08	8.68	35.28
10	E1a_E4b	KnownJunction	1	11.35	17.55	12.29	1.68	9.20	9.06	13.79
11	E1_Db	KnownBoundary	0	0.00	1.02	0.00	0.00	0.00	0.00	0.00
12	E1b_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER1b	ExonRegion	0	0.00	3.22	0.00	0.00	0.00	0.00	0.04
14	ER1c	ExonRegion	0	0.00	1.96	0.00	0.00	0.00	0.00	0.00
15	E1c_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER2a	ExonRegion	0	4.27	1.48	3.53	1.04	1.41	0.81	2.23
17	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER3a	ExonRegion	0	20.77	23.39	29.37	18.15	27.18	25.10	30.43
19	E3a_E4b	KnownJunction	0	50.15	48.02	66.84	29.69	43.43	51.48	70.30
20	ER4a	ExonRegion	0	29.97	30.98	36.92	17.46	22.27	29.42	40.81
21	ER4b	ExonRegion	0	91.29	88.39	139.26	60.19	101.24	99.13	171.88
22	E4a_E5a	KnownJunction	0	105.56	103.75	144.18	63.20	160.06	108.51	214.33
23	ER5a	ExonRegion	0	123.30	109.55	180.71	72.37	161.91	144.78	228.60
24	E5a_E6a	KnownJunction	0	104.33	92.45	168.39	72.77	164.00	137.97	190.18
25	ER6a	ExonRegion	0	110.67	105.98	180.83	92.49	159.36	156.74	256.89
26	E6a_E7a	KnownJunction	0	94.20	93.79	159.42	89.37	161.14	153.72	244.82
27	ER7a	ExonRegion	0	123.92	126.04	228.90	107.01	205.36	157.95	340.84
28	E7_Da	NovelBoundary	1	41.94	17.16	23.71	5.07	11.62	10.69	8.18
29	E7a_E8a	KnownJunction	0	162.14	101.04	260.39	99.34	251.83	148.42	360.26
30	I7	Intron	0	21.29	7.30	15.23	3.07	8.98	4.84	6.83
31	I7_SR1	SilentIntronRegion	0	20.45	7.49	14.44	3.76	7.65	5.13	7.07
32	I7_SR2	SilentIntronRegion	0	25.95	5.22	14.08	2.38	9.95	4.90	9.86
33	I7_SR4	SilentIntronRegion	0	23.38	6.57	13.44	3.29	9.93	6.02	4.44
34	I7_AR4	ActiveIntronRegion	0	25.05	8.43	20.04	2.87	11.57	4.63	11.37
35	I7_AR5	ActiveIntronRegion	0	21.70	12.00	19.52	4.22	12.60	6.52	7.06
36	E8_Aa	NovelBoundary	1	57.41	20.60	28.27	8.80	25.04	31.73	18.13
37	ER8a	ExonRegion	0	151.97	139.31	247.73	110.32	256.96	155.09	352.37
38	E8a_E9a	KnownJunction	0	149.49	115.17	225.82	87.21	196.13	164.58	316.57
39	ER9a	ExonRegion	0	208.05	161.03	278.56	103.93	290.48	179.54	342.00
40	E9a_E10a	KnownJunction	0	222.44	160.73	295.21	114.46	264.69	154.82	333.51
41	ER10a	ExonRegion	0	220.37	140.91	308.53	105.43	304.36	144.05	342.36
42	E10a_E11a	KnownJunction	0	206.99	118.27	297.88	96.85	299.04	129.82	334.90
43	ER11a	ExonRegion	0	226.22	125.97	294.73	115.45	322.68	165.92	386.30
44	E11a_E12a	KnownJunction	0	215.72	131.75	276.66	130.66	271.77	158.87	374.44
45	ER12a	ExonRegion	0	166.81	120.90	248.08	117.62	244.37	177.25	323.21
46	E12a_E13a	KnownJunction	0	97.14	85.59	186.90	104.00	183.09	165.14	230.43
47	ER13a	ExonRegion	0	95.53	89.52	153.65	90.86	169.92	132.86	251.22
48	E13a_E14a	KnownJunction	1	16.37	17.94	71.68	48.93	67.68	73.91	4.47
49	E13a_E15a	KnownJunction	1	86.45	77.00	70.82	36.87	98.62	39.23	294.75
50	ER14a	ExonRegion	1	10.76	12.24	63.11	32.09	70.54	57.11	1.63
51	E14_Da	NovelBoundary	1	10.03	15.26	27.29	30.56	60.40	57.65	1.43
52	E14a_E15a	KnownJunction	1	3.77	1.18	41.27	19.80	49.33	47.33	0.00
53	I14	Intron	1	15.22	7.05	33.02	7.79	52.16	15.52	2.86
54	I14_AR1	ActiveIntronRegion	1	15.24	7.06	33.07	7.80	52.24	15.54	2.87
55	E15_Aa	NovelBoundary	0	17.14	18.55	26.50	14.25	88.38	22.86	3.58
56	ER15a	ExonRegion	0	59.41	70.42	102.94	56.43	124.58	99.79	178.52
57	E15_Da	KnownBoundary	0	22.78	49.92	42.19	40.42	60.01	43.52	40.83
58	ER15b	ExonRegion	0	143.26	76.50	219.68	60.03	206.48	102.31	204.35
59	E15_Db	KnownBoundary	0	211.71	91.32	257.49	66.54	207.01	114.27	225.79
60	ER15c	ExonRegion	0	113.48	50.89	158.89	42.85	154.87	85.09	150.26
61	ER15d	ExonRegion	0	1.54	1.21	2.71	1.25	9.72	0.00	2.02
62	IG2_SR2	SilentIntergenicRegion	0	3.55	4.53	4.40	2.77	7.52	2.01	7.55