Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZFYVE27	Gene	0	54.82	83.05	63.47	78.53	51.68	38.24	59.85
2	370613	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	393677	Transcript	0	0	0	0	0	0	0	0
4	359980	Transcript	0	0	0	0	0	0	0	0
5	356257	Transcript	0	0	0	0	0	0	0	0
6	357540	Transcript	0	1.03	2.92	0.53	5.88	1.18	0.00	2.15
7	337540	Transcript	0	0	0	0	0	0	0	0
8	370610	Transcript	0	0	0	0	0	0	0	0
9	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER1b	ExonRegion	0	0.00	1.11	0.00	2.18	0.00	0.72	0.17
11	ER1c	ExonRegion	0	17.42	33.88	20.79	28.07	16.51	18.82	19.44
12	E1a_E2a	KnownJunction	0	6.34	36.28	12.13	22.16	6.04	24.76	7.81
13	E1b_E2a	KnownJunction	1	1.57	15.92	3.95	3.01	3.32	1.47	0.00
14	ER1d	ExonRegion	0	1.54	16.40	4.40	4.99	1.62	1.23	0.00
15	ER2a	ExonRegion	0	41.52	81.05	54.11	67.53	40.60	39.49	48.49
16	E2a_E3a	KnownJunction	0	21.45	49.50	38.67	44.67	35.57	25.43	46.20
17	E2a_E4a	NovelJunction	0	4.17	23.28	6.77	24.00	6.48	18.28	1.45
18	E2a_E5a	KnownJunction	0	1.03	2.92	0.53	5.88	1.18	0.00	2.15
19	ER3a	ExonRegion	0	31.65	60.88	52.34	38.16	39.64	26.11	61.83
20	E3a_E4a	KnownJunction	0	36.72	63.47	57.54	33.89	39.77	35.16	59.99
21	ER4a	ExonRegion	0	51.45	90.29	63.61	71.94	50.31	37.77	63.31
22	E4a_E5a	KnownJunction	0	45.00	96.76	63.98	72.44	60.93	42.18	63.36
23	I4_SR2	SilentIntronRegion	0	20.26	6.73	14.18	2.17	7.89	3.39	8.67
24	E5_Aa	NovelBoundary	0	14.82	2.99	7.62	4.63	12.91	1.39	9.26
25	ER5a	ExonRegion	0	44.51	94.27	57.74	88.31	42.04	46.29	53.10
26	E5a_E6a	KnownJunction	0	53.62	81.47	59.46	88.70	40.90	45.48	42.55
27	E5a_E7a	NovelJunction	1	0.00	0.00	0.00	1.46	4.70	0.00	12.70
28	I5_SR2	SilentIntronRegion	1	16.62	4.89	8.75	1.25	3.63	0.00	16.56
29	ER6a	ExonRegion	0	76.30	100.56	81.09	109.55	59.23	48.07	63.90
30	E6_Da	NovelBoundary	0	12.03	14.97	18.37	7.21	5.16	1.47	9.03
31	E6a_E7a	KnownJunction	0	50.72	96.73	66.28	121.15	71.35	67.75	62.69
32	I6	Intron	0	21.48	12.60	14.92	11.32	7.12	4.12	9.96
33	I6_AR1	ActiveIntronRegion	0	21.53	11.87	13.70	10.76	6.13	4.50	8.99
34	I6_SR1	SilentIntronRegion	0	28.47	14.69	17.08	16.04	9.12	5.44	10.29
35	I6_AR2	ActiveIntronRegion	0	18.39	12.49	15.31	9.83	7.29	3.15	10.88
36	ER7a	ExonRegion	0	70.83	107.20	74.64	102.69	72.04	46.04	79.74
37	E7a_E8a	KnownJunction	0	18.04	47.29	15.68	42.59	31.51	20.10	31.20
38	E7a_E8b	KnownJunction	0	41.66	46.42	40.61	56.67	41.91	23.40	46.33
39	E8_Ab	NovelBoundary	1	10.16	28.29	9.02	22.43	8.67	8.82	17.68
40	ER8a	ExonRegion	0	19.11	49.43	17.65	47.38	29.21	20.31	31.79
41	ER8b	ExonRegion	0	45.78	101.77	49.26	95.40	63.90	36.42	73.64
42	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	E8a_E10a	KnownJunction	0	52.54	96.52	52.54	84.17	65.15	32.83	63.75
44	E9a_E10a	KnownJunction	0	0.90	0.00	0.00	4.80	1.01	3.00	0.69
45	ER9a	ExonRegion	0	0.11	0.81	0.13	4.33	0.19	2.45	1.35
46	ER10a	ExonRegion	0	43.83	93.36	47.36	92.34	54.39	32.56	63.92
47	E10a_E11a	KnownJunction	0	21.85	55.80	25.08	64.69	62.96	21.25	48.83
48	I10_AR1	ActiveIntronRegion	0	16.49	12.41	11.38	6.09	7.29	3.21	10.95
49	I10_SR3	SilentIntronRegion	1	15.25	20.86	11.49	4.35	6.62	9.12	15.73
50	I10_AR3	ActiveIntronRegion	1	17.40	12.69	11.05	4.20	5.71	9.57	14.45
51	I10_AR4	ActiveIntronRegion	1	11.03	6.07	6.24	2.23	3.24	4.38	12.58
52	ER11a	ExonRegion	0	35.56	71.29	47.29	74.31	48.59	28.20	66.02
53	E11a_E12a	KnownJunction	0	45.96	71.85	61.66	72.55	48.76	36.26	73.19
54	ER12a	ExonRegion	0	39.72	77.28	59.82	80.26	48.89	32.10	65.26
55	E12a_E13a	KnownJunction	1	30.51	69.28	45.25	64.69	45.83	13.19	46.00
56	ER13a	ExonRegion	0	64.04	86.23	72.61	83.46	56.84	41.27	63.99