Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 SORBS1 Gene 0 176.52 24.81 437.81 97.95 86.33 30.93 2.23 2 371249 Transcript 0 1.06 1.41 5.95 3.40 17.71 2.19 0.26 3 393949 Transcript 0 0 0 0 0 0 0 0 4 353505 Transcript 0 0 0 0 0 0 0 0 5 306402 Transcript 0 0 0 0 0 0 0 0 6 371247 Transcript 0 0 0 0 0 0 0 0 7 371246 Transcript 0 0 0 0 0 0 0 0 8 371227 Transcript 0 0 0 0 0 0 0 0 9 351042 Transcript 0 0 0 0 0 0 0 0 10 393945 Transcript 0 0 0 0 0 0 0 0 11 347291 Transcript 1 7.36 1.63 75.72 5.36 4.33 5.92 0.00 12 361941 Transcript 0 0 0 0 0 0 0 0 13 277982 Transcript 0 0 0 0 0 0 0 0 14 371245 Transcript 0 0.51 0.40 3.16 2.08 1.62 0.41 0.00 15 371239 Transcript 0 0 0 0 0 0 0 0 16 371241 Transcript 0 0 0 0 0 0 0 0 17 354106 Transcript 0 0 0 0 0 0 0 0 18 ER1a ExonRegion 0 1.06 1.41 5.95 3.40 17.71 2.19 0.26 19 E1_Ab KnownBoundary 0 4.06 2.71 16.90 7.29 46.17 4.18 0.57 20 ER1b ExonRegion 0 10.57 12.76 71.16 30.31 37.97 9.47 1.35 21 E1a_E2a KnownJunction 1 12.17 18.55 124.25 52.85 25.47 11.55 2.09 22 E1a_E3a NovelJunction 1 1.79 0.00 9.38 31.94 0.95 1.66 0.00 23 I1_AR1 ActiveIntronRegion 1 2.51 1.14 7.23 9.97 0.33 8.51 0.26 24 I1_SR2 SilentIntronRegion 0 2.14 1.94 11.67 10.85 1.37 9.28 0.07 25 I1_AR2 ActiveIntronRegion 1 2.43 2.20 12.01 21.62 1.75 14.80 0.00 26 I1_SR3 SilentIntronRegion 0 3.24 3.29 12.07 14.62 2.38 11.39 0.11 27 ER2a ExonRegion 1 11.79 14.01 115.60 44.76 22.46 12.12 0.77 28 E2a_E3a KnownJunction 1 10.73 13.00 105.92 52.80 24.11 16.78 0.00 29 E3_Ab NovelBoundary 1 14.80 25.61 118.70 54.86 27.50 18.12 0.70 30 ER3a ExonRegion 1 15.09 25.51 134.55 62.87 29.92 19.75 0.85 31 ER3b ExonRegion 1 27.09 37.48 184.90 110.56 40.73 25.84 2.65 32 E3a_E4a KnownJunction 1 40.46 45.84 260.39 138.14 57.29 28.89 4.92 33 ER3c ExonRegion 1 34.92 44.68 249.65 138.69 53.81 32.01 3.37 34 ER4a ExonRegion 1 37.12 44.78 385.22 148.35 93.06 51.73 2.97 35 E4a_E5a KnownJunction 1 0.00 0.00 10.27 3.90 3.02 29.27 0.00 36 E4a_E6a KnownJunction 1 33.48 36.81 429.90 115.38 110.47 23.50 1.33 37 ER5a ExonRegion 1 1.50 2.23 19.97 8.44 1.57 24.11 0.00 38 E5a_E6a KnownJunction 1 1.03 1.50 25.84 4.88 3.37 21.98 0.00 39 ER6a ExonRegion 1 48.20 46.15 506.11 183.82 81.99 62.78 2.26 40 E6a_E7a KnownJunction 1 18.04 16.95 203.50 85.20 42.60 20.26 0.00 41 E6a_E8a KnownJunction 1 27.69 20.05 281.62 51.72 45.67 27.47 1.75 42 E7a_E8a KnownJunction 1 8.80 11.22 253.12 90.97 58.02 21.55 0.00 43 ER7a ExonRegion 1 17.33 17.46 310.99 118.28 60.50 27.34 0.00 44 ER8a ExonRegion 1 45.39 44.55 591.47 175.03 111.97 49.78 3.16 45 E8_Da NovelBoundary 0 3.94 8.75 9.11 9.43 6.34 3.30 0.00 46 E8a_E9a KnownJunction 1 23.93 25.35 399.45 148.30 86.29 31.78 3.60 47 E8a_E9b KnownJunction 0 0.00 0.00 0.00 0.00 1.15 0.00 0.00 48 E8a_E10a KnownJunction 1 15.61 7.20 106.05 27.69 3.34 10.16 0.00 49 I8_AR4 ActiveIntronRegion 1 4.22 13.15 16.10 10.42 5.15 2.45 0.00 50 I8_SR5 SilentIntronRegion 1 1.77 12.93 17.58 20.43 7.55 1.89 0.00 51 E9_Aa NovelBoundary 0 8.50 8.75 23.42 18.48 10.67 0.00 1.55 52 ER9a ExonRegion 1 53.57 37.71 286.31 125.45 69.64 27.05 4.09 53 E9_Ab KnownBoundary 1 48.82 29.77 216.22 97.50 63.26 28.19 1.86 54 ER9b ExonRegion 0 74.68 27.84 236.59 92.83 64.55 34.84 1.09 55 E9a_E10a KnownJunction 0 87.12 25.67 248.00 95.98 86.93 51.24 3.63 56 ER10a ExonRegion 0 251.56 62.06 577.54 170.55 111.99 49.65 4.01 57 E10a_E11a KnownJunction 0 256.72 48.50 411.90 134.94 88.45 29.13 1.72 58 E10a_E12a NovelJunction 0 16.66 4.12 44.58 15.33 3.27 6.30 0.89 59 E11a_E12a KnownJunction 0 244.74 36.81 540.99 136.48 99.22 25.25 4.83 60 ER11a ExonRegion 0 327.76 53.37 623.64 175.95 96.53 34.08 4.72 61 ER12a ExonRegion 0 341.18 48.00 722.50 158.69 139.70 34.71 5.16 62 E12a_E13a KnownJunction 0 257.28 52.28 627.08 123.16 102.75 30.52 2.58 63 ER13a ExonRegion 0 221.83 54.61 583.66 127.17 106.61 29.62 1.50 64 E13_Da NovelBoundary 0 16.12 7.93 36.04 7.37 6.25 2.76 0.00 65 E13a_E14a KnownJunction 0 1.52 1.26 29.33 13.95 0.00 1.66 0.00 66 E13a_E17a KnownJunction 0 173.06 38.91 419.89 113.48 126.68 28.92 0.70 67 I13 Intron 1 11.31 8.73 31.74 7.46 3.42 1.59 0.36 68 I13_SR1 SilentIntronRegion 0 6.83 8.24 20.15 8.73 3.11 2.65 0.21 69 I13_AR1 ActiveIntronRegion 1 18.18 9.92 48.61 6.14 3.91 0.24 0.56 70 ER14a ExonRegion 0 7.98 1.21 34.82 13.85 2.95 0.52 0.00 71 E14a_E15a KnownJunction 0 1.47 0.00 14.31 2.74 0.00 0.00 0.00 72 E14a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73 E14a_E17a KnownJunction 0 1.75 0.00 5.52 1.08 0.00 0.00 0.00 74 E15_Aa NovelBoundary 0 4.71 11.24 28.09 4.09 0.00 5.60 0.00 75 ER15a ExonRegion 0 2.31 0.00 20.64 4.55 1.21 0.00 0.00 76 E15a_E17a KnownJunction 0 4.29 0.00 17.55 6.37 0.00 0.00 0.00 77 I15_AR1 ActiveIntronRegion 0 9.78 8.06 24.11 11.60 1.78 2.46 0.82 78 I15_AR5 ActiveIntronRegion 0 9.22 9.39 33.03 9.68 2.13 2.66 0.47 79 ER16a ExonRegion 0 10.01 3.56 16.74 2.18 60.63 0.00 0.40 80 E16_Da NovelBoundary 0 116.05 62.13 74.94 61.33 26.35 45.10 49.90 81 E16a_E17a KnownJunction 0 0.78 0.00 1.29 0.00 0.00 0.00 0.00 82 I16_SR2 SilentIntronRegion 1 6.60 9.12 32.36 3.94 2.12 1.15 0.44 83 E17_Aa NovelBoundary 0 0.87 8.12 8.85 6.12 1.04 0.00 0.00 84 ER17a ExonRegion 0 195.26 34.93 486.46 108.23 113.01 26.87 2.25 85 E17a_E18a KnownJunction 0 165.70 36.60 392.34 62.82 81.81 23.40 2.34 86 ER18a ExonRegion 0 168.22 41.24 442.81 112.10 83.35 23.67 2.35 87 E18a_E19a KnownJunction 1 132.12 35.23 368.31 97.15 33.80 8.55 1.45 88 ER19a ExonRegion 0 166.50 31.67 446.38 88.78 74.51 15.20 2.52 89 E19_Da NovelBoundary 0 13.42 9.90 32.06 8.21 0.85 2.68 0.00 90 E19a_E20a KnownJunction 1 10.80 2.68 86.50 14.74 0.00 4.64 0.00 91 E19a_E23a KnownJunction 0 162.61 19.31 351.37 74.09 67.98 13.00 3.61 92 I19_SR4 SilentIntronRegion 1 10.87 8.63 52.28 7.79 5.25 0.00 0.00 93 E20_Aa NovelBoundary 1 5.49 10.04 39.86 6.26 2.95 0.00 0.00 94 ER20a ExonRegion 1 12.92 3.86 103.20 12.17 4.20 6.10 0.00 95 E20a_E21a KnownJunction 0 0.92 0.00 4.27 1.68 0.00 0.00 0.00 96 E20a_E22a KnownJunction 0 0.00 0.00 7.92 0.00 0.00 0.00 0.00 97 E20a_E23a KnownJunction 1 7.36 1.63 75.72 5.36 4.33 5.92 0.00 98 ER21a ExonRegion 0 3.40 0.94 7.29 2.83 2.43 0.00 0.00 99 E21a_E22a KnownJunction 0 1.03 0.00 1.48 0.00 0.00 0.00 0.00 100 E21a_E23a KnownJunction 0 2.39 1.44 7.43 2.84 0.00 0.00 0.00 101 ER22a ExonRegion 0 6.25 2.78 21.49 1.80 0.81 0.93 0.00 102 E22_Da NovelBoundary 1 9.93 11.14 33.30 4.63 2.03 0.00 0.00 103 E22a_E23a KnownJunction 0 3.25 0.00 17.91 1.16 0.00 0.00 0.00 104 ER23a ExonRegion 0 154.99 17.03 438.74 85.97 62.41 23.27 2.21 105 E23a_E24a KnownJunction 0 128.43 17.44 367.61 82.52 56.62 21.71 0.87 106 ER24a ExonRegion 0 186.04 22.01 494.88 96.77 68.14 28.56 1.68 107 E24a_E25a KnownJunction 0 211.18 29.92 430.59 90.13 99.52 30.12 2.67 108 E25_Aa NovelBoundary 0 89.09 2.52 178.02 1.57 0.00 0.00 0.00 109 ER25a ExonRegion 0 237.79 29.33 468.92 109.21 78.06 36.82 1.27 110 E25a_E26a KnownJunction 0 114.99 17.84 392.55 105.71 1.18 30.95 0.60 111 E25a_E27a KnownJunction 0 84.42 10.27 82.00 30.40 67.15 5.57 0.00 112 ER26a ExonRegion 0 137.54 18.92 482.29 91.18 8.43 28.96 2.60 113 E26a_E27a KnownJunction 0 126.28 13.40 456.65 95.31 10.19 18.49 3.84 114 ER27a ExonRegion 0 261.84 27.35 698.51 120.29 78.62 21.57 4.29 115 E27a_E28a KnownJunction 0 251.33 21.60 624.23 91.62 82.83 20.69 3.17 116 E27a_E29a NovelJunction 0 6.76 1.63 10.92 8.83 1.18 0.00 0.00 117 ER28a ExonRegion 0 329.21 26.12 672.04 120.61 92.78 23.74 2.36 118 E28a_E29a KnownJunction 0 203.25 29.14 502.40 124.32 82.53 20.29 2.79 119 ER29a ExonRegion 0 258.22 27.34 629.82 147.64 127.20 30.73 3.23 120 E29a_E30a KnownJunction 1 286.03 30.05 654.90 165.15 132.14 19.51 5.09 121 ER30a ExonRegion 0 225.84 27.10 555.44 157.39 117.48 38.33 4.19 122 E30a_E31a KnownJunction 0 0.00 0.00 0.52 0.00 0.00 0.00 0.00 123 E30a_E31b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 124 E30a_E32a KnownJunction 1 7.24 0.00 42.28 2.93 5.35 5.36 0.00 125 E30a_E33a KnownJunction 0 172.82 24.04 437.50 156.86 141.22 41.51 4.97 126 ER31a ExonRegion 0 3.98 1.44 18.02 6.85 1.76 2.02 0.00 127 E31_Ab KnownBoundary 0 1.85 2.71 18.01 4.36 0.88 1.61 0.00 128 ER31b ExonRegion 0 2.15 2.37 17.52 5.16 0.86 0.12 0.00 129 E31a_E33a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 130 I31_AR9 ActiveIntronRegion 0 3.40 7.91 45.67 9.51 1.53 4.83 0.00 131 I31_AR11 ActiveIntronRegion 0 7.16 8.87 51.90 4.27 3.62 1.98 0.00 132 ER32a ExonRegion 0 9.62 1.19 48.76 3.99 7.34 5.31 0.00 133 E32a_E33a KnownJunction 1 7.11 3.10 49.00 4.82 8.05 3.32 0.00 134 ER33a ExonRegion 0 211.66 33.21 554.41 152.21 115.96 35.16 2.74 135 E33a_E34a KnownJunction 0 246.18 33.97 604.66 141.33 129.79 23.13 0.00 136 ER34a ExonRegion 0 231.85 32.18 634.37 158.87 108.53 37.75 4.91 137 E34a_E35a KnownJunction 0 183.17 40.62 630.80 172.06 129.56 36.47 5.27 138 ER35a ExonRegion 0 210.57 30.28 697.18 146.24 125.21 37.09 4.06 139 E35_Da KnownBoundary 0 175.59 21.36 554.16 104.44 111.09 37.22 3.28 140 ER35b ExonRegion 0 310.67 27.23 808.08 128.88 144.18 36.85 4.07 141 E35_Db KnownBoundary 0 321.98 23.96 697.35 104.92 155.56 22.99 2.42 142 ER35c ExonRegion 0 260.52 27.55 582.20 114.94 122.27 41.98 2.63 143 ER35d ExonRegion 0 0.51 0.40 3.16 2.08 1.62 0.41 0.00