Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SEC31B	Gene	0	14.65	10.81	9.07	10.87	8.49	5.70	3.78
2	370329	Transcript	0	3.54	2.09	2.75	1.60	1.67	1.41	1.35
3	370345	Transcript	0	14.83	9.61	9.16	9.90	7.28	4.62	3.23
4	ER1a	ExonRegion	0	0.18	0.00	0.00	0.00	0.00	0.00	0.00
5	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER2a	ExonRegion	0	0.31	0.00	0.00	0.00	0.00	0.00	0.01
7	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER3a	ExonRegion	0	3.56	0.00	1.42	0.84	1.49	0.37	1.45
9	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER4a	ExonRegion	0	7.58	2.50	7.71	3.64	3.00	3.02	2.37
11	E4a_E6b	KnownJunction	0	7.16	5.60	7.30	1.49	4.54	1.66	3.00
12	Ix	Intron	0	7.98	12.49	16.49	10.89	38.60	8.47	18.04
13	Ix_AR3	ActiveIntronRegion	0	11.12	16.76	23.90	18.81	37.77	15.77	18.70
14	Ix_AR1	ActiveIntronRegion	0	6.71	11.39	12.90	5.58	47.84	3.22	22.05
15	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.04	0.00	0.00
16	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER6a	ExonRegion	0	1.50	1.21	1.21	0.75	1.68	0.19	0.91
18	E6_Ab	KnownBoundary	0	2.54	1.63	2.99	2.84	2.12	0.00	2.31
19	ER6b	ExonRegion	0	10.53	10.06	10.31	11.30	5.33	5.59	4.61
20	E6a_E7a	KnownJunction	0	13.59	9.83	14.83	11.32	6.39	10.32	2.75
21	ER7a	ExonRegion	0	9.43	12.80	10.70	6.66	5.76	4.51	3.33
22	E7a_E8a	KnownJunction	0	8.96	15.61	8.67	11.57	2.07	6.16	0.00
23	E7a_E9a	KnownJunction	0	3.15	1.21	0.00	0.00	0.88	0.00	1.40
24	ER8a	ExonRegion	0	6.54	10.28	6.90	10.15	3.81	5.90	1.48
25	E8a_E9a	KnownJunction	0	5.72	5.75	4.74	9.16	4.29	3.83	0.79
26	ER9a	ExonRegion	0	13.08	11.24	8.99	10.33	4.14	6.18	5.02
27	E9a_E10a	KnownJunction	0	12.10	11.35	10.58	7.40	6.82	4.21	6.58
28	ER10a	ExonRegion	0	11.16	10.64	8.45	9.47	8.55	6.36	4.25
29	E10a_E11a	KnownJunction	0	9.36	14.76	7.53	15.79	7.19	2.92	4.99
30	ER11a	ExonRegion	0	10.17	13.54	6.63	8.25	5.32	3.80	4.74
31	E11a_E12a	KnownJunction	0	11.02	7.22	9.96	8.21	5.35	1.15	4.69
32	ER12a	ExonRegion	0	16.70	8.48	5.18	13.39	8.49	4.22	5.07
33	E12a_E13a	KnownJunction	0	17.19	10.46	7.56	8.24	7.47	2.57	5.06
34	ER13a	ExonRegion	0	12.43	17.02	10.03	14.24	4.79	7.78	5.58
35	E13_Da	KnownBoundary	0	10.15	23.33	9.20	11.38	4.50	14.02	2.46
36	E13a_E14a	KnownJunction	0	0.70	1.60	0.55	3.36	0.00	1.39	0.62
37	ER13b	ExonRegion	0	13.43	11.62	11.03	10.07	6.81	9.05	5.29
38	E13_Db	NovelBoundary	0	21.33	15.63	12.40	15.47	19.94	4.15	4.18
39	I13	Intron	0	20.74	5.58	15.39	9.28	5.56	7.73	2.72
40	I13_AR1	ActiveIntronRegion	0	21.03	5.64	15.61	9.39	5.63	7.85	2.76
41	E14_Aa	NovelBoundary	0	34.68	17.63	26.15	17.01	6.18	4.29	7.14
42	ER14a	ExonRegion	0	19.52	12.63	15.74	15.12	11.78	4.59	4.09
43	E14a_E15a	KnownJunction	0	24.45	18.78	18.78	14.01	16.34	2.09	2.91
44	ER15a	ExonRegion	0	23.19	13.76	16.44	16.85	12.71	3.66	4.52
45	E15a_E16a	KnownJunction	0	12.77	8.96	6.02	9.94	7.17	3.00	1.69
46	ER16a	ExonRegion	0	14.82	8.83	11.31	14.28	11.05	1.91	5.06
47	E16a_E17a	KnownJunction	0	11.55	11.30	13.90	15.79	9.75	2.60	7.02
48	ER17a	ExonRegion	0	15.54	10.80	9.60	7.83	10.17	2.61	4.49
49	E17a_E18a	KnownJunction	0	10.40	9.20	8.33	5.69	6.02	2.68	4.74
50	E17a_E19a	NovelJunction	0	9.28	3.91	10.38	5.15	3.20	0.00	5.06
51	ER18a	ExonRegion	0	6.06	5.48	9.06	8.08	4.96	1.43	3.12
52	E18a_E19a	KnownJunction	0	6.23	9.88	3.91	5.69	2.35	0.00	0.72
53	ER19a	ExonRegion	0	19.55	11.88	12.19	12.39	9.35	3.81	3.99
54	E19a_E20a	KnownJunction	0	25.07	12.51	14.30	14.33	11.25	5.79	3.80
55	ER20a	ExonRegion	0	24.01	8.33	12.44	12.02	6.76	5.21	4.72
56	E20a_E21a	KnownJunction	0	23.62	3.81	11.60	7.56	3.00	5.60	1.19
57	ER21a	ExonRegion	0	17.52	6.49	7.41	6.78	6.43	7.10	4.82
58	E21a_E22a	KnownJunction	0	12.92	3.65	7.23	5.20	5.83	8.76	3.31
59	ER22a	ExonRegion	0	19.62	7.77	10.62	14.38	7.99	4.97	6.42
60	E22a_E23a	KnownJunction	0	26.60	10.22	9.67	12.87	9.82	2.41	8.10
61	ER23a	ExonRegion	0	24.99	16.02	18.35	14.42	8.48	7.67	7.00
62	E23a_E24a	KnownJunction	0	35.38	22.09	15.48	14.09	7.31	10.45	7.81
63	ER24a	ExonRegion	0	27.35	20.21	14.42	12.05	11.65	7.93	5.68
64	E24a_E25a	KnownJunction	1	21.93	15.61	5.25	5.85	1.11	6.97	2.25
65	E25_Aa	NovelBoundary	0	4.66	2.86	3.81	1.49	10.42	0.00	1.63
66	ER25a	ExonRegion	0	17.78	15.72	7.91	12.34	10.22	6.68	3.93
67	E25a_E26a	KnownJunction	0	22.63	12.19	9.37	14.74	5.56	7.21	1.45
68	ER26a	ExonRegion	0	16.98	10.50	6.05	13.02	4.67	7.29	2.17
69	E26a_E27a	KnownJunction	0	9.53	6.88	6.88	13.84	5.28	8.58	1.56
70	E27_Aa	NovelBoundary	0	8.01	4.12	1.64	12.35	23.05	4.37	8.84
71	ER27a	ExonRegion	0	16.10	11.45	8.58	13.20	8.50	5.82	4.21
72	E27_Da	NovelBoundary	0	6.63	6.28	2.86	2.44	8.28	6.86	7.52
73	E27a_E28a	KnownJunction	0	5.44	4.89	5.07	9.43	5.19	1.02	0.85
74	ER28a	ExonRegion	0	13.86	9.32	9.95	7.18	9.50	6.42	6.34
75	E28a_E29a	KnownJunction	0	11.97	4.12	7.63	7.15	12.22	8.36	3.50
76	ER29a	ExonRegion	0	8.77	6.23	9.56	5.49	13.28	5.48	1.46
77	E29_Da	NovelBoundary	0	2.22	4.49	1.70	0.00	4.15	0.00	8.23
78	E29a_E30a	KnownJunction	0	7.91	8.22	13.75	5.36	10.40	1.66	0.00
79	ER30a	ExonRegion	0	15.90	12.24	7.41	13.89	13.39	7.65	2.58