Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PLAC9	Gene	0	13.13	21.18	2.08	5.00	9.75	52.62	9.10
2	372270	Transcript	0	10.56	9.93	1.68	2.16	0.56	2.46	5.13
3	372267	Transcript	0	0.00	0.00	0.00	0.00	0.00	1.63	0.00
4	372263	Transcript	0	0	0	0	0	0	0	0
5	394558	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	IG35	Intergenic	0	13.64	11.25	1.27	2.07	0.02	1.91	4.00
7	IG35_SR1	SilentIntergenicRegion	0	13.67	11.40	1.29	2.07	0.01	1.91	4.07
8	IG35_AR1	ActiveIntergenicRegion	0	12.66	2.78	0.53	2.03	0.43	1.84	0.30
9	ER1a	ExonRegion	1	11.72	6.67	0.02	2.60	0.00	0.03	1.97
10	E1_Da	NovelBoundary	0	19.41	20.07	0.60	4.55	0.00	7.24	5.98
11	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	I1	Intron	1	11.24	12.59	1.30	4.55	0.38	2.76	5.17
13	I1_SR1	SilentIntronRegion	0	14.50	13.96	1.53	4.56	0.34	3.60	6.14
14	I1_AR1	ActiveIntronRegion	1	3.65	9.48	0.77	4.58	0.48	0.78	2.96
15	ER2a	ExonRegion	0	3.23	7.94	0.69	0.36	3.76	24.09	0.47
16	E2_Da	NovelBoundary	1	4.51	12.03	2.99	1.60	0.00	0.00	1.43
17	E2a_E3a	KnownJunction	1	0.00	1.16	0.89	3.17	6.62	74.18	0.00
18	I2	Intron	1	20.59	21.73	1.94	3.52	0.58	4.74	11.39
19	I2_SR1	SilentIntronRegion	1	15.31	18.84	1.33	3.26	0.59	4.78	6.98
20	I2_AR1	ActiveIntronRegion	1	37.17	36.92	1.87	5.65	0.64	7.78	21.43
21	I2_SR2	SilentIntronRegion	1	22.09	19.14	2.35	3.11	0.61	3.97	12.72
22	I2_AR2	ActiveIntronRegion	1	14.98	19.07	3.39	1.75	0.00	4.66	8.30
23	I2_SR3	SilentIntronRegion	1	19.79	33.78	2.71	4.86	0.25	5.38	14.69
24	E3_Aa	NovelBoundary	1	22.50	40.83	3.20	8.24	3.20	7.37	13.64
25	ER3a	ExonRegion	1	18.54	20.37	2.57	8.81	25.48	127.09	12.03
26	E3_Da	NovelBoundary	0	44.36	38.78	4.66	10.08	1.87	21.49	26.20
27	E3a_E4a	KnownJunction	1	0.00	0.00	0.89	6.10	19.62	123.52	0.89
28	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.63	0.00
29	I3	Intron	1	56.23	55.48	7.56	8.63	5.11	8.64	28.62
30	I3_SR1	SilentIntronRegion	1	33.09	32.26	2.64	7.92	5.19	6.85	19.14
31	I3_AR2	ActiveIntronRegion	1	73.86	73.16	11.29	9.19	5.07	10.02	35.88
32	E4_Aa	NovelBoundary	1	45.58	81.31	3.92	9.29	3.48	20.77	33.12
33	ER4a	ExonRegion	0	15.66	27.99	1.91	8.92	20.29	125.60	11.16
34	E4_Da	NovelBoundary	1	16.99	25.09	2.89	6.12	0.00	6.46	12.21
35	E4a_E5a	KnownJunction	1	0.00	0.00	0.00	0.00	11.41	87.23	0.60
36	I4	Intron	1	17.12	24.30	1.98	2.72	0.07	4.50	15.66
37	I4_AR1	ActiveIntronRegion	1	9.60	10.13	0.25	0.86	0.38	0.00	6.13
38	I4_SR1	SilentIntronRegion	1	19.06	27.91	2.42	3.20	0.00	5.64	18.09
39	E5_Aa	NovelBoundary	1	23.90	38.62	6.39	3.93	0.00	6.27	26.36
40	ER5a	ExonRegion	0	31.51	61.45	6.41	12.70	14.06	59.82	31.92
41	E5_Da	KnownBoundary	1	47.57	68.20	14.26	7.59	3.09	22.99	47.42
42	ER5b	ExonRegion	1	19.96	23.12	5.02	3.89	1.69	7.36	13.41
43	E5_Db	NovelBoundary	1	25.14	61.50	6.34	7.48	4.93	13.08	27.44
44	I5	Intron	1	26.98	39.44	5.72	3.89	0.75	7.22	18.20
45	I5_AR1	ActiveIntronRegion	1	28.13	41.09	5.96	4.06	0.79	7.53	18.98
46	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00