Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	JMJD1C	Gene	0	391.27	365.66	258.56	411.60	305.08	425.89	57.79
2	399262	Transcript	0	0	0	0	0	0	0	0
3	399251	Transcript	0	13.02	0.00	5.88	11.46	0.00	0.00	0.00
4	402544	Transcript	0	80.87	125.59	42.22	120.04	34.85	84.46	8.29
5	327520	Transcript	0	6.66	5.13	7.38	7.62	9.99	13.89	0.82
6	IG7	Intergenic	0	10.99	2.41	7.57	1.84	2.34	1.19	2.92
7	IG7_AR6	ActiveIntergenicRegion	0	10.34	1.68	5.88	1.47	1.17	0.00	2.33
8	IG7_AR4	ActiveIntergenicRegion	0	19.42	2.61	11.04	1.40	3.17	0.69	4.46
9	IG7_SR3	SilentIntergenicRegion	0	12.48	1.99	7.08	1.02	2.05	1.80	2.42
10	IG7_SR2	SilentIntergenicRegion	0	16.14	2.78	12.68	1.12	3.45	0.37	1.95
11	IG7_AR2	ActiveIntergenicRegion	0	25.95	6.31	15.94	5.86	5.10	2.75	5.52
12	IG7_SR1	SilentIntergenicRegion	0	9.94	4.51	9.14	3.81	2.47	0.95	3.83
13	ER1a	ExonRegion	0	4.28	29.93	2.89	15.24	3.03	16.61	5.88
14	E1a_E2a	KnownJunction	1	18.99	75.79	10.48	28.93	4.31	14.74	7.11
15	ER2a	ExonRegion	0	106.90	124.73	98.23	98.14	31.39	71.87	26.86
16	E2a_E4a	KnownJunction	1	77.22	59.90	105.58	66.56	42.14	52.55	28.43
17	E2a_E6a	NovelJunction	0	6.39	18.92	15.49	12.71	1.01	7.88	0.80
18	I2_AR11	ActiveIntronRegion	0	32.46	6.33	28.42	3.24	17.49	0.00	14.43
19	ER3a	ExonRegion	0	220.15	335.16	110.53	283.33	103.65	200.17	18.19
20	E3a_E4a	NovelJunction	1	193.05	268.13	138.08	270.83	107.38	314.66	9.54
21	E3a_E5a	NovelJunction	0	0.00	5.25	0.00	12.06	0.00	6.03	0.00
22	E3a_E6a	KnownJunction	0	6.58	28.56	3.64	31.18	0.00	16.94	0.00
23	ER4a	ExonRegion	0	193.98	241.13	164.31	270.34	105.91	293.52	27.58
24	E4a_E5a	KnownJunction	0	134.14	166.95	115.11	147.24	91.96	183.66	20.78
25	E4a_E6a	NovelJunction	0	144.53	235.71	120.38	218.14	36.56	261.19	23.62
26	ER5a	ExonRegion	0	103.15	169.19	111.72	159.18	116.19	178.42	23.17
27	E5a_E6a	KnownJunction	1	90.54	146.31	132.93	150.22	120.96	139.04	32.06
28	ER6a	ExonRegion	0	267.19	510.10	238.65	531.92	260.09	483.06	61.19
29	E6a_E7a	KnownJunction	0	307.30	568.09	261.44	606.54	228.50	594.74	71.76
30	E6a_E8a	NovelJunction	0	6.19	29.27	11.21	33.16	2.03	36.58	1.33
31	ER7a	ExonRegion	0	277.91	648.67	251.41	714.73	191.68	607.85	80.68
32	E7a_E8a	KnownJunction	1	223.21	607.74	211.83	699.65	218.86	593.32	78.11
33	ER8a	ExonRegion	0	234.18	503.20	221.71	538.28	196.93	466.30	58.38
34	E8a_E9a	KnownJunction	0	223.23	360.08	246.28	372.61	118.51	332.53	42.02
35	ER9a	ExonRegion	0	254.37	349.42	291.79	348.38	103.44	329.27	43.22
36	E9_Ab	KnownBoundary	0	269.49	335.17	303.63	346.63	84.30	327.76	40.01
37	ER9b	ExonRegion	0	543.03	526.34	396.25	598.44	336.78	521.55	79.47
38	E9a_E10a	KnownJunction	1	274.33	488.44	256.51	542.17	387.68	537.47	86.22
39	ER10a	ExonRegion	0	337.10	394.22	248.54	445.87	278.46	482.73	66.37
40	E10a_E11a	KnownJunction	0	271.16	316.91	216.79	376.21	188.96	436.35	43.58
41	ER11a	ExonRegion	0	443.70	385.74	282.71	435.82	323.51	412.48	63.16
42	E11a_E12a	KnownJunction	0	389.71	292.64	183.90	281.10	403.77	269.90	39.18
43	E11a_E13a	KnownJunction	0	13.02	0.00	5.88	11.46	0.00	0.00	0.00
44	ER12a	ExonRegion	0	690.57	381.57	315.73	470.08	542.14	416.23	57.41
45	E12a_E13a	KnownJunction	1	731.37	376.10	328.07	496.31	508.36	467.76	42.03
46	ER13a	ExonRegion	0	587.65	278.37	313.29	360.48	521.60	385.12	54.97
47	E13a_E14a	KnownJunction	0	711.98	358.42	385.41	468.32	627.57	540.34	78.56
48	ER14a	ExonRegion	0	551.91	339.33	337.14	463.06	497.26	491.62	76.67
49	E14a_E15a	KnownJunction	0	500.11	261.30	276.56	388.76	451.79	383.53	53.77
50	ER15a	ExonRegion	0	460.56	317.59	308.46	414.50	560.63	410.26	85.83
51	E15a_E16a	KnownJunction	0	461.41	330.15	333.38	373.99	434.75	376.64	76.85
52	ER16a	ExonRegion	0	460.93	306.30	300.49	392.72	429.47	434.43	62.82
53	E16a_E17a	KnownJunction	0	422.52	248.63	256.07	360.23	348.77	374.61	41.52
54	E16a_E17b	KnownJunction	1	15.87	13.06	12.49	45.62	0.90	36.29	6.68
55	ER17a	ExonRegion	0	500.98	329.25	326.28	348.42	371.56	466.70	55.11
56	E17_Ab	KnownBoundary	0	518.42	353.59	345.87	321.95	431.76	504.40	65.65
57	ER17b	ExonRegion	0	418.15	289.40	253.47	351.71	336.67	416.68	54.10
58	E17a_E18a	KnownJunction	0	341.84	231.92	215.89	282.24	313.93	311.76	43.87
59	ER18a	ExonRegion	0	373.64	341.71	235.73	403.74	314.72	449.34	64.53
60	E18a_E19a	KnownJunction	0	428.85	297.08	238.88	402.76	416.47	414.81	53.91
61	ER19a	ExonRegion	0	547.29	331.25	314.39	423.25	453.95	485.71	59.97
62	E19a_E20a	KnownJunction	0	410.16	314.73	278.89	397.45	467.07	440.32	51.21
63	E19a_E21a	NovelJunction	1	46.33	10.30	14.70	17.53	1.18	18.81	0.00
64	ER20a	ExonRegion	0	366.93	339.22	236.88	372.74	384.51	482.56	61.17
65	E20a_E21a	KnownJunction	0	301.42	277.30	223.69	341.05	313.54	454.55	47.98
66	ER21a	ExonRegion	0	328.58	317.41	262.72	397.62	446.11	487.97	70.94
67	E21a_E22a	KnownJunction	0	291.12	292.64	233.76	363.26	430.51	445.04	61.73
68	ER22a	ExonRegion	0	443.30	370.87	282.47	439.48	399.63	518.57	62.85
69	E22a_E23a	KnownJunction	0	345.82	339.64	220.02	454.70	395.49	465.11	63.53
70	E22a_E24a	NovelJunction	0	2.70	16.24	9.46	23.70	6.18	20.26	0.82
71	ER23a	ExonRegion	0	440.99	356.48	273.92	462.46	474.55	550.01	71.68
72	E23a_E24a	KnownJunction	0	355.76	330.00	228.36	418.39	427.51	603.37	63.60
73	ER24a	ExonRegion	0	384.11	399.10	262.04	447.68	396.54	620.77	60.15
74	E24a_E25a	KnownJunction	0	281.24	362.49	201.99	380.93	383.16	564.46	55.89
75	ER25a	ExonRegion	0	326.22	394.16	212.43	418.42	347.94	548.03	61.47
76	E25a_E26a	KnownJunction	0	222.29	370.64	186.08	368.09	267.09	488.32	50.06
77	I25_SR3	SilentIntronRegion	1	82.56	39.12	57.03	29.95	21.89	24.50	11.42
78	I25_AR5	ActiveIntronRegion	0	80.81	35.08	49.06	24.19	28.09	32.84	7.11
79	ER26a	ExonRegion	0	359.40	422.11	251.16	480.55	436.82	640.23	70.15
80	E26a_E27a	KnownJunction	0	327.84	324.32	228.30	410.02	461.38	599.51	74.05
81	ER27a	ExonRegion	0	321.54	278.85	198.95	319.41	320.19	559.50	53.91
82	ER27b	ExonRegion	0	6.66	5.13	7.38	7.62	9.99	13.89	0.82