Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	USP54	Gene	0	402.22	333.03	237.31	107.31	122.18	70.45	52.32
2	339859	Transcript	0	8.94	2.49	7.97	1.15	5.90	0.00	0.68
3	319786	Transcript	0	15.71	5.31	7.86	4.71	4.38	0.00	2.77
4	408019	Transcript	0	0	0	0	0	0	0	0
5	394811	Transcript	0	119.47	314.97	61.91	98.61	50.19	62.87	24.35
6	IG8_AR1	ActiveIntergenicRegion	0	11.40	3.87	8.73	3.20	7.66	3.75	1.40
7	ER1a	ExonRegion	0	3.54	0.19	1.94	2.17	6.99	0.01	0.68
8	E1a_E2a	KnownJunction	0	1.75	0.00	4.02	1.27	3.02	0.00	0.00
9	I1_AR14	ActiveIntronRegion	0	233.58	222.29	170.52	46.10	31.95	28.86	20.73
10	I1_SR11	SilentIntronRegion	0	267.34	92.29	111.03	21.65	19.70	9.58	9.58
11	I1_AR15	ActiveIntronRegion	0	82.40	25.79	32.67	6.95	6.67	0.75	2.10
12	E2_Aa	NovelBoundary	1	231.86	93.89	101.99	18.07	21.60	6.16	6.51
13	ER2a	ExonRegion	0	429.09	251.91	213.78	61.47	76.60	34.51	28.97
14	E2a_E3a	KnownJunction	1	593.83	397.70	252.27	108.26	143.73	54.97	32.23
15	ER3a	ExonRegion	1	652.84	408.36	313.76	115.62	128.83	55.63	40.50
16	E3a_E4a	KnownJunction	0	608.05	396.67	306.98	121.80	102.61	62.71	45.57
17	E3a_E5a	NovelJunction	1	12.47	21.15	8.15	1.08	2.26	0.00	1.71
18	ER4a	ExonRegion	1	705.50	379.84	315.06	126.28	154.21	59.29	44.81
19	E4a_E5a	KnownJunction	0	535.35	336.54	295.94	121.88	138.78	51.72	53.99
20	E4a_E9a	NovelJunction	1	4.44	52.99	6.09	5.36	3.43	3.81	0.57
21	ER5a	ExonRegion	0	525.10	323.46	283.34	106.94	122.50	48.90	47.09
22	E5a_E6a	KnownJunction	0	492.02	379.78	269.20	101.40	148.78	42.58	57.55
23	ER6a	ExonRegion	1	456.37	349.07	242.72	129.47	146.15	38.88	61.60
24	E6a_E7a	KnownJunction	1	393.87	295.50	186.44	128.52	118.84	39.66	53.27
25	ER7a	ExonRegion	0	422.50	322.62	232.00	132.26	115.86	46.80	55.63
26	E7a_E8a	KnownJunction	1	356.25	313.34	222.67	145.78	106.23	25.83	46.63
27	ER8a	ExonRegion	0	378.01	316.33	221.61	115.15	114.75	47.12	46.97
28	E8a_E9a	KnownJunction	0	388.73	292.35	256.70	85.55	156.97	33.20	43.88
29	ER9a	ExonRegion	0	505.62	385.51	330.57	122.28	123.10	61.52	49.58
30	E9a_E10a	KnownJunction	0	403.68	357.50	286.13	97.80	108.07	67.40	48.04
31	ER10a	ExonRegion	0	402.19	352.73	265.32	90.53	105.43	55.63	41.86
32	E10a_E11a	KnownJunction	1	67.88	74.53	47.62	22.86	9.89	5.71	7.07
33	E10a_E12a	NovelJunction	0	206.87	283.60	159.94	62.91	88.06	53.39	42.02
34	ER11a	ExonRegion	0	59.70	56.84	39.07	24.64	9.87	10.70	6.02
35	E11a_E12a	KnownJunction	0	35.47	42.48	20.87	38.14	6.22	11.87	5.35
36	ER12a	ExonRegion	0	221.15	260.88	160.64	75.27	76.00	46.57	37.18
37	E12a_E13a	KnownJunction	0	369.38	311.45	210.09	83.63	86.19	74.69	44.10
38	ER13a	ExonRegion	0	580.37	425.10	306.29	112.97	118.98	67.80	49.02
39	E13a_E14a	KnownJunction	1	506.46	448.43	258.38	123.32	116.23	83.62	30.48
40	ER14a	ExonRegion	0	496.16	295.51	241.98	79.74	98.67	61.26	41.86
41	E14a_E15a	KnownJunction	0	217.52	197.88	137.65	55.83	64.48	48.05	36.72
42	ER15a	ExonRegion	0	233.84	293.42	155.85	80.65	76.97	51.94	39.28
43	E15a_E16a	KnownJunction	0	222.23	310.16	158.85	87.21	62.59	49.47	46.61
44	ER16a	ExonRegion	0	325.12	376.62	217.07	105.18	111.85	61.66	53.33
45	E16a_E17a	KnownJunction	0	251.45	288.80	192.09	103.62	116.60	39.15	51.06
46	E16a_E18a	NovelJunction	0	51.87	72.64	33.40	18.99	3.39	11.79	8.11
47	E16a_E19a	NovelJunction	0	4.34	20.36	8.48	2.84	0.00	2.95	0.54
48	ER17a	ExonRegion	0	306.83	318.45	221.35	105.12	116.94	53.22	54.81
49	E17a_E18a	KnownJunction	0	345.36	296.63	217.93	106.03	109.22	47.33	54.53
50	ER18a	ExonRegion	0	371.43	350.28	235.54	118.72	134.70	67.41	60.81
51	E18a_E19a	KnownJunction	0	255.12	376.94	178.15	131.55	91.31	72.36	51.06
52	ER19a	ExonRegion	0	386.33	397.57	271.13	119.01	127.88	78.95	62.51
53	E19a_E20a	KnownJunction	0	337.52	399.17	251.27	132.42	160.10	77.48	65.22
54	E20_Aa	NovelBoundary	1	7.68	4.07	6.98	0.00	4.08	0.00	18.42
55	ER20a	ExonRegion	0	357.29	408.30	227.21	136.42	155.61	77.72	77.72
56	E20_Da	NovelBoundary	1	217.54	273.85	136.99	92.62	94.29	46.74	50.23
57	E20a_E21a	KnownJunction	0	15.71	5.31	7.86	4.71	4.38	0.00	2.77
58	E20a_E22a	NovelJunction	1	10.56	25.56	7.47	9.48	2.35	0.00	0.70
59	E20b_E21a	KnownJunction	1	150.41	89.27	114.78	47.65	124.95	9.57	41.82
60	E20b_E22a	KnownJunction	0	119.47	314.97	61.91	98.61	50.19	62.87	24.35
61	ER20b	ExonRegion	0	291.90	409.73	190.21	138.66	158.73	77.56	67.86
62	I20	Intron	1	50.42	24.97	27.61	5.07	11.67	2.33	30.95
63	I20_AR1	ActiveIntronRegion	1	50.73	25.10	27.78	5.10	11.73	2.35	31.13
64	E21_Aa	NovelBoundary	1	68.83	37.41	35.16	4.98	17.43	3.32	62.48
65	ER21a	ExonRegion	0	275.94	145.95	171.37	63.43	105.52	23.39	56.09
66	E21_Da	NovelBoundary	1	34.80	21.99	11.42	1.46	5.16	2.33	24.91
67	E21a_E22a	KnownJunction	0	215.10	135.48	127.54	49.50	68.72	23.56	32.98
68	ER22a	ExonRegion	0	398.59	400.37	245.54	144.15	159.74	86.59	75.20
69	E22a_E23a	KnownJunction	0	323.58	314.65	180.98	87.91	88.48	57.03	52.74
70	E23_Aa	NovelBoundary	1	125.99	0.00	71.95	1.11	0.00	0.00	2.88
71	ER23a	ExonRegion	0	417.62	311.09	225.94	114.98	144.27	97.12	55.02
72	ER23b	ExonRegion	0	21.52	7.29	17.95	0.00	7.69	0.00	1.35
73	IG7	Intergenic	0	15.42	5.28	8.01	2.40	2.49	0.61	8.13
74	IG7_SR2	SilentIntergenicRegion	0	12.42	4.92	3.76	0.61	1.03	0.57	3.51
75	IG7_AR2	ActiveIntergenicRegion	0	17.59	5.95	9.91	2.98	3.24	0.69	10.50