Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 TTC18 Gene 0 9.58 3.82 18.37 2.90 2.31 3.92 4.27 2 355577 Transcript 0 1.07 0.59 3.37 0.00 0.00 1.10 0.58 3 394865 Transcript 0 1.03 1.63 1.84 3.28 0.00 3.89 0.57 4 394862 Transcript 0 0 0 0 0 0 0 0 5 310715 Transcript 0 0 0 0 0 0 0 0 6 401621 Transcript 0 0 0 0 0 0 0 0 7 394864 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 340329 Transcript 0 4.08 0.66 0.05 0.00 3.86 0.00 0.76 9 372928 Transcript 0 1.17 0.00 3.27 0.00 0.00 0.00 0.00 10 IG3_AR2 ActiveIntergenicRegion 0 10.43 5.08 7.98 2.32 0.91 5.39 3.11 11 IG3_SR1 SilentIntergenicRegion 0 7.68 5.10 3.98 4.13 0.50 11.23 4.95 12 ER1a ExonRegion 0 0.00 0.00 0.05 0.00 0.00 0.00 0.00 13 E1_Da NovelBoundary 0 3.52 3.73 2.08 1.14 0.00 2.57 7.48 14 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER2a ExonRegion 0 3.22 1.76 10.07 0.00 0.00 3.30 1.73 16 E2_Ab KnownBoundary 1 2.89 0.00 14.04 0.00 0.00 2.57 0.76 17 ER2b ExonRegion 1 1.87 0.00 13.89 1.84 0.00 0.52 1.37 18 E2a_E3a KnownJunction 1 1.80 0.00 17.85 2.76 0.00 0.00 2.49 19 ER2c ExonRegion 0 0.35 0.00 0.00 0.00 0.57 0.00 0.00 20 E2b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E2c_E3a KnownJunction 0 5.31 1.00 0.00 0.00 4.17 0.00 0.77 22 ER2d ExonRegion 0 2.85 0.31 0.10 0.00 3.54 0.00 0.75 23 ER3a ExonRegion 0 9.55 2.66 21.69 5.55 3.24 1.47 4.26 24 E3a_E4a KnownJunction 0 6.41 4.31 18.11 10.10 0.00 2.89 2.31 25 ER4a ExonRegion 0 12.70 1.77 21.19 5.58 2.73 4.56 4.30 26 E4a_E5a KnownJunction 0 15.67 1.58 19.23 1.68 1.15 8.25 2.38 27 ER5a ExonRegion 0 8.36 1.46 14.01 0.52 1.99 5.87 2.22 28 E5a_E6a KnownJunction 0 2.54 1.13 6.48 0.00 0.88 0.00 3.12 29 ER6a ExonRegion 0 2.01 2.08 4.39 0.47 0.96 0.83 2.23 30 E6a_E7a KnownJunction 0 2.77 0.00 5.03 1.65 0.00 3.11 1.43 31 ER7a ExonRegion 0 6.43 2.54 12.63 0.90 2.82 3.62 2.14 32 E7a_E8a KnownJunction 0 11.42 0.00 21.48 0.00 2.10 6.08 1.55 33 ER8a ExonRegion 0 10.98 0.64 21.46 2.76 1.66 9.32 2.22 34 E8_Da KnownBoundary 0 12.27 1.23 22.53 4.39 0.90 14.04 2.19 35 E8a_E25b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 ER8b ExonRegion 0 9.38 2.17 20.46 3.81 2.05 9.84 4.26 37 E8b_E9a KnownJunction 0 9.20 2.39 20.26 0.00 4.26 11.36 6.32 38 ER9a ExonRegion 0 9.38 1.32 22.90 0.00 0.83 3.11 6.42 39 E9a_E10a KnownJunction 0 6.83 0.00 16.14 0.00 0.00 1.10 7.70 40 ER10a ExonRegion 0 5.32 1.82 14.87 0.75 0.40 2.05 6.88 41 E10a_E11a KnownJunction 0 7.18 4.12 14.18 2.95 0.00 3.30 3.81 42 ER11a ExonRegion 0 5.08 5.60 18.15 2.84 1.63 1.46 4.61 43 E11a_E12a KnownJunction 0 6.88 8.46 19.47 2.84 0.99 1.47 6.41 44 ER12a ExonRegion 0 7.66 3.28 17.73 3.29 0.91 0.37 3.87 45 E12a_E13a KnownJunction 0 4.12 2.50 17.24 4.09 3.07 0.00 2.88 46 ER13a ExonRegion 0 6.13 2.91 14.82 5.96 2.23 0.79 3.16 47 E13a_E14a KnownJunction 0 6.78 1.26 14.23 5.69 2.05 6.30 3.41 48 ER14a ExonRegion 0 6.98 2.22 19.09 2.47 1.57 0.32 3.49 49 E14a_E15a KnownJunction 0 5.44 0.00 21.53 5.88 3.16 0.00 1.50 50 ER15a ExonRegion 0 6.51 0.02 19.89 5.19 2.77 0.00 3.03 51 E15a_E16a KnownJunction 0 3.40 0.00 12.44 1.46 3.32 0.00 1.33 52 E15b_E16b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 ER15b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 ER16a ExonRegion 0 8.15 0.00 19.10 2.49 3.24 0.00 3.78 55 ER16b ExonRegion 0 9.47 3.45 20.34 3.08 1.64 1.05 4.87 56 E16_Da KnownBoundary 0 2.64 0.00 7.26 1.60 0.00 1.21 3.35 57 E16a_E28b KnownJunction 0 2.34 0.00 6.54 0.00 0.00 0.00 0.00 58 E16_Db KnownBoundary 0 3.22 2.84 6.44 0.00 1.13 0.00 0.66 59 E16b_E28c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60 ER16c ExonRegion 0 7.88 3.34 17.27 1.25 4.05 2.45 4.72 61 ER16d ExonRegion 0 7.81 5.08 19.90 1.57 3.44 1.37 5.41 62 E16c_E17a KnownJunction 0 8.81 7.07 21.53 1.30 3.27 1.58 5.92 63 ER17a ExonRegion 0 10.94 3.31 15.10 2.04 3.42 2.52 4.98 64 E17_Da NovelBoundary 0 6.39 1.63 10.66 0.00 0.00 0.00 3.90 65 E17a_E18a KnownJunction 0 7.28 0.00 1.14 2.52 0.00 0.00 2.22 66 I17 Intron 0 11.26 2.05 21.37 0.72 0.92 1.32 2.58 67 I17_AR1 ActiveIntronRegion 0 11.25 1.96 18.68 0.61 0.87 1.50 1.92 68 I17_SR1 SilentIntronRegion 1 6.16 1.52 21.94 0.60 0.72 0.82 2.26 69 I17_AR2 ActiveIntronRegion 0 10.63 1.21 31.33 0.00 0.47 2.45 3.37 70 I17_AR3 ActiveIntronRegion 0 8.88 1.21 25.14 0.00 0.81 1.36 2.77 71 I17_AR4 ActiveIntronRegion 0 15.72 2.69 25.21 1.03 1.17 1.41 3.96 72 E18_Aa NovelBoundary 0 21.60 4.07 23.19 4.36 4.08 1.02 5.60 73 ER18a ExonRegion 0 24.65 3.36 22.67 2.38 2.78 2.86 6.41 74 E18a_E19a KnownJunction 0 28.34 2.44 21.48 1.30 3.37 1.10 4.97 75 ER19a ExonRegion 0 19.89 5.48 25.04 3.11 2.09 5.93 5.98 76 E19a_E20a KnownJunction 0 11.57 4.52 23.34 2.79 1.15 6.62 5.78 77 ER20a ExonRegion 0 11.54 6.38 26.74 1.84 0.80 3.74 6.26 78 E20a_E21a KnownJunction 0 11.65 3.76 26.86 2.44 1.89 4.50 4.01 79 ER21a ExonRegion 0 12.30 4.38 20.30 3.71 1.58 3.77 4.80 80 E21_Da NovelBoundary 1 2.09 1.26 10.69 1.52 0.95 1.61 3.65 81 E21a_E22a KnownJunction 0 9.98 0.00 7.98 0.00 0.00 0.00 2.29 82 E22_Aa NovelBoundary 0 4.39 2.71 15.48 0.00 0.00 4.64 2.94 83 ER22a ExonRegion 0 15.79 7.89 28.02 3.58 1.16 8.33 4.49 84 E22a_E23a KnownJunction 0 14.95 5.39 31.07 0.00 1.18 11.74 4.89 85 ER23a ExonRegion 0 14.45 6.42 27.14 1.48 0.69 7.53 4.99 86 E23a_E24a KnownJunction 0 5.99 3.78 20.16 1.14 1.18 6.22 3.24 87 E24_Aa NovelBoundary 0 8.38 3.02 15.65 3.25 0.00 2.17 2.39 88 ER24a ExonRegion 0 11.83 4.91 23.43 3.39 1.15 6.31 6.01 89 E24a_E25a KnownJunction 0 8.16 1.23 18.71 1.68 0.97 15.46 4.70 90 ER25a ExonRegion 0 7.74 3.00 22.26 3.82 0.47 9.48 4.57 91 E25_Ab KnownBoundary 0 8.24 4.23 25.13 4.55 0.95 5.17 4.97 92 ER25b ExonRegion 0 6.93 5.53 20.11 5.26 1.89 6.70 4.54 93 E25a_E26a KnownJunction 0 10.21 4.07 9.47 1.27 1.04 7.83 3.84 94 E25a_E27a KnownJunction 0 1.03 1.63 1.84 3.28 0.00 3.89 0.57 95 ER26a ExonRegion 0 5.94 6.13 10.30 0.91 0.62 2.78 3.97 96 E26a_E27a KnownJunction 0 2.75 2.68 7.76 1.54 0.00 4.64 2.46 97 ER27a ExonRegion 0 9.47 8.83 17.98 6.49 1.62 7.40 4.61 98 E27a_E28a KnownJunction 0 8.11 8.98 14.34 9.48 0.00 5.04 1.29 99 ER28a ExonRegion 0 11.24 6.02 16.96 7.64 0.13 3.06 2.25 100 E28a_E29a KnownJunction 0 7.81 1.08 22.07 3.36 1.18 2.76 4.06 101 ER28b ExonRegion 0 9.99 3.64 16.93 6.55 0.81 1.84 2.70 102 ER28c ExonRegion 0 10.83 4.25 20.19 3.49 1.13 1.23 3.64 103 I28_AR1 ActiveIntronRegion 0 3.94 2.59 1.93 2.13 11.56 1.54 4.30 104 E29_Aa NovelBoundary 0 3.97 2.86 4.17 6.64 29.35 2.44 7.05 105 ER29a ExonRegion 0 9.43 6.02 16.45 4.07 10.85 5.31 5.02 106 ER29b ExonRegion 0 0.00 0.00 1.86 0.00 0.00 0.00 0.51 107 IG2_AR1 ActiveIntergenicRegion 0 2.44 1.05 3.24 2.01 8.23 0.79 3.27