Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	HERC4	Gene	0	111.78	73.01	90.98	41.70	95.88	100.58	151.83
2	395198	Transcript	0	0	0	0	0	0	0	0
3	373700	Transcript	0	0	0	0	0	0	0	0
4	395185	Transcript	1	25.84	70.25	8.89	16.09	31.42	25.15	16.01
5	395187	Transcript	0	4.36	4.36	3.75	0.00	0.00	1.66	0.00
6	277817	Transcript	0	7.10	3.00	3.78	0.60	4.26	1.18	9.62
7	ER1a	ExonRegion	0	8.80	9.38	7.89	4.29	7.66	5.87	12.11
8	E1_Ab	KnownBoundary	0	23.95	28.32	39.46	15.09	24.57	23.82	44.14
9	ER1b	ExonRegion	0	43.61	41.08	51.40	20.03	26.33	44.75	49.32
10	E1a_E2a	KnownJunction	0	44.81	53.54	42.16	27.33	19.94	42.02	52.48
11	I1	Intron	0	43.52	31.64	24.05	11.69	7.32	19.14	13.14
12	I1_AR1	ActiveIntronRegion	0	38.14	34.53	19.66	12.57	6.68	20.45	10.26
13	I1_SR1	SilentIntronRegion	0	102.30	61.69	52.97	23.18	16.43	34.48	27.05
14	I1_AR2	ActiveIntronRegion	0	48.68	23.99	29.78	9.19	7.75	15.56	17.30
15	E2a_E3a	KnownJunction	0	60.83	71.67	40.29	23.38	20.70	81.93	55.45
16	ER2a	ExonRegion	0	60.99	79.09	48.30	27.52	20.35	77.48	68.00
17	I2	Intron	1	57.13	25.12	26.48	7.65	6.93	8.11	9.37
18	I2_SR1	SilentIntronRegion	1	57.48	25.27	26.64	7.70	6.97	8.16	9.43
19	E3_Aa	NovelBoundary	1	60.25	19.65	27.25	8.99	5.58	3.32	10.36
20	ER3a	ExonRegion	0	245.02	223.84	164.29	84.21	142.28	174.07	186.94
21	E3_Da	NovelBoundary	1	54.01	14.42	32.32	4.85	20.86	6.49	11.01
22	E3a_E4a	KnownJunction	1	26.59	98.41	5.79	19.53	9.31	33.85	18.57
23	E3a_E5a	KnownJunction	0	133.72	95.18	92.29	50.15	140.39	71.53	152.77
24	E3a_E7a	KnownJunction	0	4.36	4.36	3.75	0.00	0.00	1.66	0.00
25	I3	Intron	1	26.22	21.38	11.05	4.53	13.16	6.67	18.18
26	I3_AR1	ActiveIntronRegion	0	29.20	15.02	14.39	3.08	11.30	5.08	17.86
27	I3_SR2	SilentIntronRegion	1	39.42	24.37	13.90	6.78	18.29	6.77	26.03
28	I3_AR2	ActiveIntronRegion	1	21.87	31.59	8.82	5.78	14.90	9.83	20.67
29	I3_AR3	ActiveIntronRegion	1	18.68	22.15	5.05	4.99	9.72	3.68	11.83
30	E4_Aa	NovelBoundary	0	55.33	46.89	47.25	33.78	30.98	40.63	41.09
31	ER4a	ExonRegion	1	25.10	42.08	11.98	12.64	53.53	16.44	13.45
32	E4_Da	NovelBoundary	1	840.14	532.57	661.45	519.61	864.67	548.32	326.24
33	I4_AR1	ActiveIntronRegion	1	19.78	22.74	9.30	5.01	14.23	10.27	17.12
34	ER5a	ExonRegion	0	107.48	107.73	103.59	72.71	135.11	126.34	221.07
35	E5a_E7a	KnownJunction	0	107.63	81.84	84.31	32.35	129.99	95.49	172.71
36	ER6a	ExonRegion	0	14.19	6.00	7.57	1.20	8.52	2.37	19.23
37	E6a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	ER7a	ExonRegion	0	100.70	114.26	102.43	54.33	130.71	105.23	215.66
39	E7a_E8a	KnownJunction	0	88.32	137.19	101.08	62.09	128.59	121.99	225.03
40	ER8a	ExonRegion	0	85.41	102.44	97.48	54.63	113.26	113.74	208.19
41	E8a_E9a	KnownJunction	0	69.13	94.97	95.98	58.73	138.34	103.31	194.16
42	ER9a	ExonRegion	0	93.47	91.39	93.34	56.64	126.86	108.34	191.68
43	E9a_E10a	KnownJunction	0	102.64	69.33	86.88	50.80	124.58	96.16	181.98
44	E9a_E11a	NovelJunction	1	3.17	10.19	0.00	4.12	0.00	27.84	0.00
45	ER10a	ExonRegion	0	106.05	92.86	106.31	58.27	111.96	85.92	204.45
46	E10a_E11a	KnownJunction	0	112.86	104.22	107.94	44.62	112.27	79.17	158.52
47	ER11a	ExonRegion	0	117.27	118.88	110.69	51.69	106.55	104.25	167.68
48	E11a_E12a	KnownJunction	0	97.42	85.30	121.64	37.76	88.89	95.41	155.88
49	E11a_E20a	NovelJunction	1	0.00	8.12	0.00	0.00	0.00	0.00	0.00
50	ER12a	ExonRegion	0	106.36	81.95	108.74	41.12	97.35	112.11	170.78
51	E12a_E13a	KnownJunction	0	108.82	77.82	88.68	56.13	110.93	115.45	151.54
52	ER13a	ExonRegion	0	120.57	85.28	118.61	47.55	130.58	116.20	183.69
53	E13a_E14a	KnownJunction	0	135.05	114.99	112.88	45.81	132.67	129.55	187.74
54	ER14a	ExonRegion	0	165.89	119.32	127.74	49.55	138.31	140.91	232.51
55	E14a_E15a	KnownJunction	0	163.85	109.03	130.12	59.41	146.71	150.45	231.31
56	ER15a	ExonRegion	0	152.92	115.30	141.91	53.84	162.24	132.85	235.29
57	E15a_E16a	KnownJunction	0	130.52	90.79	95.05	32.89	133.91	98.54	159.16
58	E15a_E17a	NovelJunction	0	12.25	6.44	1.61	0.00	12.31	7.45	3.10
59	E15a_E18a	NovelJunction	0	2.50	0.00	7.10	0.00	15.19	4.85	1.72
60	ER16a	ExonRegion	0	147.24	100.55	117.95	44.41	151.66	125.81	223.60
61	E16a_E17a	KnownJunction	0	154.95	81.65	114.59	60.52	131.06	116.50	207.96
62	ER17a	ExonRegion	0	202.29	95.00	166.66	58.32	154.08	147.05	242.15
63	E17a_E18a	KnownJunction	0	182.47	70.75	159.53	54.29	130.80	151.26	219.40
64	ER18a	ExonRegion	0	150.39	68.55	136.97	50.01	119.31	140.87	220.69
65	E18a_E19a	KnownJunction	0	2.95	0.00	0.89	0.00	10.72	0.00	9.04
66	E18a_E20a	KnownJunction	0	126.78	59.40	120.73	49.39	71.72	114.76	171.53
67	E19a_E20a	KnownJunction	0	5.01	4.52	0.89	0.00	11.73	6.11	10.46
68	ER19a	ExonRegion	0	6.15	3.80	1.55	1.30	13.40	4.70	13.60
69	ER20a	ExonRegion	0	121.83	74.52	113.16	40.28	107.06	117.46	213.61
70	E20a_E21a	KnownJunction	0	112.14	69.49	94.36	37.52	135.97	111.78	197.72
71	ER21a	ExonRegion	0	113.46	85.72	102.69	54.11	111.25	107.63	205.19
72	E21a_E22a	KnownJunction	0	109.75	86.59	95.84	44.65	137.79	113.31	192.21
73	ER22a	ExonRegion	0	130.34	83.16	100.40	50.93	111.05	108.34	202.40
74	E22a_E23a	KnownJunction	0	151.54	73.93	113.64	37.11	117.64	77.75	190.11
75	ER23a	ExonRegion	0	239.80	92.92	161.08	76.20	167.99	170.00	250.46
76	E23a_E24a	KnownJunction	0	293.26	91.40	164.55	88.56	206.48	163.42	264.13
77	E23a_E25a	NovelJunction	0	8.80	3.44	4.34	5.74	0.88	9.89	1.78
78	ER24a	ExonRegion	0	282.33	85.29	163.52	66.48	205.17	144.48	251.80
79	E24a_E25a	KnownJunction	0	245.99	89.19	152.96	50.90	175.71	138.18	203.64
80	ER25a	ExonRegion	0	247.02	83.91	153.22	69.63	163.45	152.38	227.87
81	E25a_E26a	KnownJunction	0	249.58	76.19	154.52	63.72	165.24	143.78	240.40
82	ER26a	ExonRegion	0	172.63	56.70	130.93	40.56	144.60	134.03	200.53
83	E26a_E27a	KnownJunction	1	127.18	44.77	118.99	24.65	115.96	135.85	178.67
84	ER27a	ExonRegion	0	112.20	58.09	124.67	37.45	114.98	121.29	195.42
85	E27a_E28a	KnownJunction	0	94.41	53.23	114.01	41.23	122.66	98.84	191.70
86	ER28a	ExonRegion	0	108.94	64.39	108.05	45.60	110.46	133.09	190.95
87	E28_Da	KnownBoundary	1	112.56	62.26	112.13	45.78	102.05	174.44	180.56
88	ER28b	ExonRegion	0	75.21	35.02	56.99	29.57	58.05	92.87	96.80
89	ER28c	ExonRegion	0	0.00	0.00	0.17	0.00	1.72	0.00	0.76