Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	POLR3A	Gene	0	41.83	30.37	85.69	46.78	125.04	20.78	57.32
2	372371	Transcript	0	44.27	33.14	93.10	49.24	135.27	21.18	60.82
3	IG48_AR3	ActiveIntergenicRegion	0	0.48	0.78	1.94	2.50	31.45	0.50	0.43
4	ER1a	ExonRegion	0	8.31	15.20	23.93	18.16	33.30	7.69	22.63
5	E1a_E2a	KnownJunction	1	3.55	24.25	17.43	21.92	14.36	10.10	14.86
6	ER2a	ExonRegion	0	18.98	25.20	51.99	39.44	69.02	21.09	43.05
7	E2a_E3a	KnownJunction	1	10.68	27.32	41.30	40.96	122.11	22.83	37.15
8	ER3a	ExonRegion	0	16.70	34.72	64.57	45.91	65.40	30.84	45.04
9	E3a_E4a	KnownJunction	1	15.76	38.65	83.38	63.47	84.24	22.99	43.28
10	ER4a	ExonRegion	0	28.65	30.24	89.95	47.04	75.35	27.74	51.32
11	E4a_E5a	KnownJunction	0	29.16	34.34	99.30	43.02	80.57	19.14	48.53
12	ER5a	ExonRegion	0	39.66	34.77	95.90	49.33	89.06	17.86	54.39
13	E5a_E6a	KnownJunction	0	49.45	34.49	115.11	44.27	113.19	18.20	52.98
14	ER6a	ExonRegion	0	53.03	39.28	116.91	46.00	130.80	17.88	57.16
15	E6a_E7a	KnownJunction	1	71.48	37.17	144.90	41.75	228.55	16.11	50.35
16	ER7a	ExonRegion	1	101.62	38.41	147.20	60.23	179.52	23.55	65.46
17	E7a_E8a	KnownJunction	1	128.40	58.30	170.23	79.54	149.98	25.75	51.49
18	ER8a	ExonRegion	1	128.04	50.03	186.50	74.15	263.73	25.01	66.64
19	E8_Da	NovelBoundary	1	37.67	3.97	48.83	1.22	4.03	0.00	2.14
20	E8a_E9a	KnownJunction	1	89.46	25.56	113.70	31.13	164.74	18.22	35.44
21	ER9a	ExonRegion	1	102.90	29.36	156.58	54.45	198.57	19.56	63.70
22	E9a_E10a	KnownJunction	0	83.05	40.33	136.93	50.61	145.28	17.53	57.51
23	ER10a	ExonRegion	0	65.54	37.10	115.45	48.46	139.57	24.66	68.09
24	E10a_E11a	KnownJunction	0	67.54	32.81	117.25	50.90	189.54	32.78	78.45
25	ER11a	ExonRegion	0	45.77	32.58	110.70	47.53	154.76	26.42	65.76
26	E11a_E12a	KnownJunction	0	31.48	22.12	92.47	47.14	79.46	22.00	64.02
27	ER12a	ExonRegion	0	26.23	30.13	77.39	52.03	91.59	18.18	58.10
28	E12a_E13a	KnownJunction	0	25.59	36.54	73.63	50.28	86.86	18.49	56.72
29	ER13a	ExonRegion	0	31.45	37.58	89.17	53.62	136.58	22.81	67.28
30	E13a_E14a	KnownJunction	0	31.93	32.63	75.17	43.70	93.25	23.93	52.74
31	ER14a	ExonRegion	0	37.20	31.53	67.57	42.86	129.45	25.66	58.75
32	E14a_E15a	KnownJunction	0	41.34	24.38	69.16	49.28	193.25	25.11	59.09
33	ER15a	ExonRegion	0	48.25	33.01	94.29	51.65	143.37	20.11	62.30
34	E15a_E16a	KnownJunction	0	36.37	32.45	74.77	48.33	123.86	20.58	51.75
35	ER16a	ExonRegion	0	36.92	36.17	81.29	48.62	132.02	21.78	67.50
36	E16a_E17a	KnownJunction	0	31.98	32.97	84.71	40.69	118.10	17.85	62.48
37	ER17a	ExonRegion	0	27.88	25.27	74.14	50.15	114.75	22.00	61.70
38	E17a_E18a	KnownJunction	0	17.22	21.67	62.86	41.67	73.98	14.77	41.68
39	ER18a	ExonRegion	0	26.46	24.82	74.83	49.12	106.81	17.73	57.81
40	E18a_E19a	KnownJunction	0	30.96	31.13	84.37	50.36	119.71	13.86	56.75
41	ER19a	ExonRegion	0	33.92	24.84	92.08	43.24	126.93	15.09	57.04
42	E19a_E20a	KnownJunction	0	53.61	22.41	108.08	46.71	171.08	13.91	66.31
43	ER20a	ExonRegion	0	76.17	44.66	144.31	65.92	203.45	24.78	81.99
44	E20a_E21a	KnownJunction	0	112.39	52.28	213.60	64.94	260.36	45.77	100.26
45	ER21a	ExonRegion	0	75.75	37.61	149.96	57.52	178.06	29.07	81.81
46	E21a_E22a	KnownJunction	0	33.83	14.27	64.11	30.48	83.96	20.18	44.26
47	ER22a	ExonRegion	0	55.14	22.58	131.80	41.51	156.31	31.07	77.23
48	E22a_E23a	KnownJunction	0	58.85	22.23	127.23	50.47	213.42	22.83	107.49
49	ER23a	ExonRegion	0	36.37	19.66	83.60	39.69	118.58	16.72	61.74
50	E23a_E24a	KnownJunction	0	21.56	19.94	66.15	35.98	67.13	15.87	40.30
51	ER24a	ExonRegion	0	28.27	29.19	63.74	45.05	86.16	14.86	58.46
52	E24a_E25a	KnownJunction	0	34.08	26.67	90.46	51.09	152.13	16.51	65.35
53	ER25a	ExonRegion	0	32.96	43.66	86.14	57.37	136.88	14.87	69.32
54	E25a_E26a	KnownJunction	0	38.30	43.19	82.70	43.24	136.75	16.80	63.14
55	ER26a	ExonRegion	0	35.43	50.06	79.92	62.28	127.90	22.89	72.36
56	E26_Da	NovelBoundary	1	9.21	1.00	29.30	1.63	0.92	0.00	3.22
57	E26a_E27a	KnownJunction	0	27.09	48.13	74.01	52.26	129.70	16.54	61.63
58	ER27a	ExonRegion	0	30.76	30.95	73.55	59.24	157.74	23.36	76.02
59	E27a_E28a	KnownJunction	0	29.99	28.48	75.43	58.30	167.87	18.68	83.51
60	ER28a	ExonRegion	0	35.26	39.33	72.50	59.23	192.53	28.03	81.40
61	E28a_E29a	KnownJunction	0	51.34	42.82	83.72	62.96	180.87	25.03	88.07
62	ER29a	ExonRegion	0	38.71	46.69	78.17	70.30	205.17	25.53	89.30
63	E29a_E30a	KnownJunction	0	37.19	48.63	78.86	47.79	206.18	20.90	68.48
64	ER30a	ExonRegion	0	31.60	37.66	70.37	54.84	144.96	21.26	72.85
65	E30a_E31a	KnownJunction	0	21.28	33.21	54.19	50.88	119.48	22.83	50.00
66	ER31a	ExonRegion	0	31.44	19.84	59.46	34.51	92.88	17.51	39.86
67	IG47_AR5	ActiveIntergenicRegion	0	13.67	9.73	26.95	17.71	43.94	11.06	17.41
68	IG47_SR4	SilentIntergenicRegion	0	1.54	1.21	6.89	2.49	9.31	2.45	4.72
69	IG47_AR3	ActiveIntergenicRegion	0	2.06	0.58	6.90	3.69	10.42	1.09	2.41