Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NUDT5	Gene	0	65.90	37.57	84.83	35.91	283.45	22.01	74.26
2	378952	Transcript	0	22.75	8.97	17.94	8.55	91.99	9.93	12.20
3	378929	Transcript	0	4.67	1.17	4.99	1.85	11.32	2.46	3.70
4	378940	Transcript	0	17.81	7.25	22.67	6.01	94.71	2.12	12.70
5	378927	Transcript	0	13.23	6.23	12.68	7.76	33.91	12.69	16.45
6	378937	Transcript	0	6.58	1.21	7.06	0.94	22.53	2.76	3.71
7	ER1a	ExonRegion	1	22.75	8.97	17.94	8.55	91.99	9.93	12.20
8	E1_Ab	KnownBoundary	0	9.91	1.39	7.77	5.53	95.35	4.61	10.68
9	E1_Ac	KnownBoundary	1	13.57	4.36	33.04	6.04	273.06	2.76	14.75
10	ER1b	ExonRegion	1	63.27	29.56	72.25	47.38	448.12	13.49	73.76
11	ER1c	ExonRegion	0	124.92	43.68	137.66	70.88	805.05	21.51	138.58
12	E1_Ad	KnownBoundary	1	173.43	59.01	183.34	99.18	1027.79	26.88	197.86
13	ER1d	ExonRegion	0	117.19	54.25	146.74	73.12	473.97	23.93	146.88
14	E1a_E2a	KnownJunction	0	37.40	44.14	75.47	43.59	174.10	14.74	78.18
15	ER2a	ExonRegion	0	114.59	88.47	144.90	84.18	303.59	36.58	137.97
16	E2a_E3a	KnownJunction	0	299.10	140.08	328.49	108.72	463.50	45.72	268.79
17	ER3a	ExonRegion	0	218.41	136.19	280.57	104.91	986.35	42.91	249.38
18	E3a_E4a	KnownJunction	0	0.00	0.00	1.52	0.00	1.11	0.00	0.00
19	E3a_E5a	KnownJunction	0	99.02	114.96	152.64	86.12	1109.46	46.55	185.09
20	ER4a	ExonRegion	0	0.69	0.00	0.97	0.00	1.23	0.00	0.00
21	E4a_E5a	KnownJunction	0	1.03	0.00	0.00	0.00	1.13	0.00	0.00
22	ER5a	ExonRegion	0	99.97	118.52	164.35	72.85	744.61	46.74	174.38
23	E5a_E6a	KnownJunction	0	100.39	98.57	161.59	50.31	556.91	32.32	137.24
24	E6_Aa	NovelBoundary	1	0.83	0.00	3.03	1.52	0.99	10.40	0.59
25	ER6a	ExonRegion	0	150.24	111.99	216.44	78.73	617.41	45.43	169.20
26	E6a_E7a	KnownJunction	0	153.03	106.14	215.57	71.98	617.65	43.12	173.02
27	E6a_E8a	NovelJunction	0	3.19	3.10	10.98	4.12	18.65	2.41	4.70
28	E7_Aa	NovelBoundary	1	56.88	1.39	78.58	5.20	0.00	4.13	3.12
29	ER7a	ExonRegion	0	145.39	97.06	200.96	87.18	723.32	47.29	192.53
30	E7_Da	NovelBoundary	0	6.86	3.10	4.22	0.00	0.00	9.03	2.14
31	E7a_E8a	KnownJunction	0	154.82	91.87	224.64	99.05	902.15	39.64	229.30
32	ER8a	ExonRegion	0	175.72	97.65	257.92	114.01	983.72	54.92	231.07
33	E8a_E9a	KnownJunction	0	29.86	15.58	46.78	13.33	243.30	11.85	33.61
34	E8a_E9b	NovelJunction	0	1.79	2.73	1.58	0.00	11.90	0.00	7.58
35	I8_AR4	ActiveIntronRegion	1	10.01	4.21	6.86	3.15	32.80	5.74	14.87
36	E9_Aa	NovelBoundary	1	11.48	5.67	14.59	3.85	51.20	8.39	20.12
37	E9a_E9b	KnownJunction	0	208.11	83.39	271.02	94.22	620.77	37.33	197.06
38	ER9a	ExonRegion	0	218.41	98.81	308.74	107.93	738.31	51.36	222.24
39	ER9b	ExonRegion	0	19.04	6.56	13.83	5.82	48.87	12.75	21.32
40	E9_Ab	KnownBoundary	1	11.63	6.49	12.85	8.32	35.48	10.40	20.02
41	ER9c	ExonRegion	0	196.84	102.92	274.74	115.94	656.15	69.16	242.80
42	E9_Db	KnownBoundary	0	13.13	5.54	20.23	8.02	27.80	11.52	8.01
43	E9b_E10a	KnownJunction	0	0.68	0.00	0.00	0.00	3.02	0.00	0.00
44	E9b_E11a	KnownJunction	0	134.27	86.56	156.49	105.36	696.43	57.11	211.86
45	E9b_E12a	KnownJunction	0	0.00	1.21	0.00	2.74	0.00	0.00	0.00
46	ER9d	ExonRegion	0	7.42	5.90	11.54	9.69	18.96	12.62	11.58
47	E9_Dc	NovelBoundary	1	4.67	2.94	13.92	15.14	24.23	12.86	13.76
48	E10_Aa	NovelBoundary	1	4.66	3.97	12.07	6.99	23.84	17.13	12.80
49	ER10a	ExonRegion	0	8.65	2.33	9.98	3.70	19.62	4.92	7.40
50	E10_Da	NovelBoundary	1	12.32	8.22	20.25	25.57	14.43	77.34	14.15
51	E11_Aa	NovelBoundary	0	3.72	11.80	7.75	6.80	25.40	6.94	18.62
52	ER11a	ExonRegion	0	161.67	75.43	189.09	72.38	625.46	49.16	160.29
53	E11_Da	NovelBoundary	0	16.74	4.91	25.35	1.27	51.11	1.42	16.90
54	E11_Db	NovelBoundary	0	23.45	7.22	29.99	9.75	65.72	2.17	20.29
55	ER11b	ExonRegion	0	24.59	4.86	25.74	3.74	86.65	11.03	14.84
56	Ix	Intron	0	42.87	16.11	66.13	15.16	208.43	5.24	39.19
57	Ix_AR1	ActiveIntronRegion	0	42.97	16.14	66.28	15.20	208.87	5.25	39.28
58	E12_Aa	NovelBoundary	0	117.63	20.23	113.32	25.25	557.56	13.59	72.59
59	ER12a	ExonRegion	0	35.62	13.28	45.35	9.29	189.43	4.24	25.40