Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NMT2	Gene	0	15.84	24.43	27.68	33.87	44.00	25.58	28.88
2	378165	Transcript	1	17.26	20.94	38.23	40.37	45.94	45.48	29.12
3	396800	Transcript	0	0.08	0.00	0.00	0.06	0.40	0.06	0.40
4	378143	Transcript	0	0.00	0.00	0.34	1.87	0.40	0.00	0.17
5	378150	Transcript	0	0	0	0	0	0	0	0
6	396794	Transcript	0	0.23	0.67	0.30	1.62	0.69	1.23	0.34
7	ER1a	ExonRegion	0	3.49	5.81	2.51	7.93	7.45	8.28	5.25
8	E1_Ab	KnownBoundary	0	6.01	12.95	8.82	16.63	5.07	22.62	10.46
9	ER1b	ExonRegion	0	3.39	9.83	6.60	12.25	9.00	10.06	5.14
10	E1a_E3b	KnownJunction	0	5.39	11.48	6.81	26.06	15.35	23.64	6.46
11	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER3a	ExonRegion	0	0.46	1.34	0.61	3.24	1.38	2.45	0.67
13	ER3b	ExonRegion	0	11.55	33.94	24.87	43.66	38.46	50.53	23.23
14	E3a_E4a	KnownJunction	0	3.09	6.44	3.31	10.19	8.53	14.39	2.58
15	E3a_E6c	KnownJunction	1	17.26	20.94	38.23	40.37	45.94	45.48	29.12
16	ER4a	ExonRegion	0	3.52	9.35	8.79	16.94	12.75	10.18	6.79
17	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	E4a_E6c	KnownJunction	0	4.79	7.91	10.85	14.93	10.24	8.60	9.93
19	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E5b_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER5b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.67
23	ER6a	ExonRegion	0	0.00	0.00	0.68	3.74	0.81	0.00	0.34
24	ER6b	ExonRegion	0	20.75	38.88	54.19	77.31	67.22	62.53	43.85
25	ER6c	ExonRegion	0	25.50	64.04	53.02	82.46	73.15	68.95	64.23
26	E6a_E7a	KnownJunction	0	36.85	65.68	76.52	87.83	88.02	77.42	75.24
27	ER7a	ExonRegion	0	30.23	60.97	62.05	85.56	97.43	71.27	79.13
28	E7a_E8a	KnownJunction	0	20.75	66.78	51.20	83.09	81.10	56.20	75.90
29	E8_Aa	NovelBoundary	0	2.72	2.71	3.15	5.58	5.26	5.57	8.80
30	ER8a	ExonRegion	0	25.07	57.43	55.66	78.11	97.86	56.00	78.85
31	E8_Da	NovelBoundary	0	6.79	11.38	4.70	5.12	5.16	7.10	4.33
32	E8a_E9a	KnownJunction	0	22.33	47.92	36.33	76.48	79.81	50.49	65.74
33	E9_Aa	NovelBoundary	0	3.61	3.78	2.89	9.35	7.10	5.23	3.90
34	ER9a	ExonRegion	1	17.85	50.45	44.35	73.31	74.17	53.01	69.60
35	E9a_E10a	KnownJunction	0	25.20	43.85	40.83	70.11	68.97	61.34	70.37
36	E9a_E11a	NovelJunction	0	2.30	4.20	10.13	6.56	6.69	4.74	5.85
37	ER10a	ExonRegion	1	15.33	55.93	37.25	75.95	55.72	55.83	67.52
38	E10a_E11a	KnownJunction	0	20.75	61.11	45.02	65.89	66.90	61.08	69.22
39	ER11a	ExonRegion	1	16.93	63.55	48.60	62.73	74.18	54.52	68.01
40	E11a_E12a	KnownJunction	1	16.66	58.51	47.34	64.34	69.20	56.57	70.54
41	ER12a	ExonRegion	1	20.90	65.37	56.14	82.23	83.18	58.20	87.87
42	E12a_E13a	KnownJunction	0	18.79	39.93	39.27	83.09	51.68	44.22	53.91
43	ER13a	ExonRegion	0	25.24	48.68	53.53	90.49	95.69	50.08	72.29
44	E13a_E14a	KnownJunction	0	34.41	44.66	54.77	95.01	75.36	57.06	56.51
45	ER14a	ExonRegion	0	26.92	46.60	56.91	87.13	82.21	48.73	56.16
46	E14a_E15a	KnownJunction	0	17.98	21.20	32.07	40.91	65.89	24.41	38.06
47	ER14b	ExonRegion	0	0.31	0.00	0.00	0.25	1.62	0.25	0.94
48	ER15a	ExonRegion	0	28.11	25.16	48.23	45.11	70.25	33.19	47.78
49	E15_Da	KnownBoundary	0	33.65	26.03	65.46	39.82	97.24	27.36	46.82
50	ER15b	ExonRegion	0	33.08	30.51	47.18	41.05	71.83	31.40	36.41
51	E15_Db	KnownBoundary	1	477.07	277.61	406.59	270.04	420.74	253.28	182.93
52	ER15c	ExonRegion	0	8.78	8.83	12.01	10.90	21.35	8.95	7.74
53	E15_Dc	NovelBoundary	0	5.46	10.06	8.21	9.29	9.94	5.39	8.46
54	Ix	Intron	0	5.32	7.89	4.18	5.99	0.00	1.26	0.45
55	Ix_AR1	ActiveIntronRegion	0	5.37	7.95	4.21	6.04	0.00	1.28	0.46
56	I15	Intron	0	10.15	2.92	4.33	1.16	0.10	2.27	1.56
57	I15_SR1	SilentIntronRegion	0	10.18	2.93	4.34	1.16	0.10	2.28	1.56
58	ER16a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	IG4_AR2	ActiveIntergenicRegion	0	11.16	3.62	2.69	1.24	0.35	4.96	1.27