Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	DIP2C	Gene	0	19.70	18.89	10.55	11.89	32.90	88.96	18.41
2	402953	Transcript	0	2.68	9.21	1.22	2.07	2.00	14.27	1.29
3	280886	Transcript	0	20.78	19.37	10.76	11.17	35.38	99.68	21.89
4	381496	Transcript	0	0.77	2.19	0.41	1.50	0.89	6.62	0.54
5	381503	Transcript	0	0.46	0.24	0.16	0.00	0.13	0.60	0.00
6	IG6_AR7	ActiveIntergenicRegion	0	10.00	9.84	11.48	6.96	3.98	7.87	9.70
7	ER1a	ExonRegion	1	1.95	10.46	0.88	4.25	2.31	23.50	0.93
8	E1a_E2b	KnownJunction	0	7.94	22.25	4.02	13.44	7.93	50.14	6.88
9	ER2a	ExonRegion	0	1.54	4.37	0.81	2.99	1.78	13.24	1.08
10	ER2b	ExonRegion	0	12.57	27.53	4.91	17.53	15.14	77.53	7.07
11	E2a_E3a	KnownJunction	0	2.67	10.48	0.00	2.55	0.95	8.82	1.59
12	E2a_E4a	KnownJunction	0	12.33	22.41	3.66	8.78	8.67	76.92	7.91
13	ER3a	ExonRegion	0	1.58	8.14	2.11	2.19	1.87	12.31	0.91
14	E3a_E4a	KnownJunction	0	3.79	9.01	1.55	1.46	3.18	21.68	1.38
15	ER4a	ExonRegion	0	8.58	25.11	3.74	14.20	11.03	84.12	8.92
16	E4a_E5a	KnownJunction	0	7.88	21.99	5.25	16.31	11.71	89.97	8.61
17	ER5a	ExonRegion	0	11.19	30.70	8.35	17.08	20.41	97.62	10.01
18	E5b_E6a	KnownJunction	0	16.94	31.05	7.69	24.11	12.03	102.70	16.01
19	ER5b	ExonRegion	0	14.60	29.16	6.77	26.19	9.72	95.63	14.84
20	ER6a	ExonRegion	0	11.19	33.63	6.14	20.57	15.03	82.27	8.48
21	E6a_E7a	KnownJunction	0	20.24	38.30	6.32	19.21	17.89	105.70	14.75
22	ER7a	ExonRegion	0	10.86	33.13	8.16	19.27	18.64	105.54	13.32
23	E7a_E8a	KnownJunction	0	10.60	29.29	9.37	21.00	13.07	114.38	10.07
24	ER8a	ExonRegion	0	19.11	31.39	12.53	15.02	19.31	119.53	18.23
25	E8a_E9a	KnownJunction	0	18.84	31.66	12.69	12.33	26.93	120.28	13.69
26	ER9a	ExonRegion	0	10.72	20.73	6.25	10.62	15.41	71.80	10.55
27	E9a_E10a	KnownJunction	0	9.58	15.95	7.40	19.02	18.19	80.27	14.59
28	ER10a	ExonRegion	0	9.76	18.86	4.97	15.65	19.55	74.13	13.87
29	E10a_E11a	KnownJunction	1	9.31	8.49	2.04	12.00	29.76	53.87	12.48
30	ER11a	ExonRegion	0	6.67	8.37	3.59	7.12	19.90	49.96	9.58
31	E11a_E12a	KnownJunction	0	7.14	11.24	6.58	10.40	23.10	52.31	12.25
32	ER12a	ExonRegion	0	11.20	15.48	5.81	12.40	26.20	90.57	12.01
33	E12a_E13a	KnownJunction	0	17.96	14.34	11.93	19.40	25.08	105.78	14.80
34	ER13a	ExonRegion	0	19.85	21.38	12.30	20.97	36.15	102.35	22.97
35	E13a_E14a	KnownJunction	1	21.00	22.65	7.27	19.72	59.18	98.30	28.48
36	ER14a	ExonRegion	0	17.32	19.83	7.27	18.41	33.61	78.88	24.82
37	E14a_E15a	KnownJunction	0	14.15	14.74	10.39	17.23	35.20	79.09	21.98
38	ER15a	ExonRegion	0	20.77	18.02	10.10	19.07	37.69	74.86	21.87
39	E15a_E16a	KnownJunction	0	24.53	18.76	6.94	15.12	44.08	64.53	26.13
40	ER16a	ExonRegion	1	16.87	24.50	5.37	14.43	41.00	62.85	21.05
41	E16a_E17a	KnownJunction	0	14.42	18.68	5.71	12.11	39.49	61.00	16.81
42	ER17a	ExonRegion	0	14.06	18.75	8.54	9.76	31.50	76.48	18.44
43	E17a_E18a	KnownJunction	0	6.89	11.82	5.42	5.69	13.56	50.92	7.44
44	ER18a	ExonRegion	0	15.67	17.05	6.97	9.31	26.85	68.86	14.79
45	E18a_E19a	KnownJunction	0	12.02	17.71	12.32	10.29	36.40	73.97	19.89
46	ER19a	ExonRegion	1	11.64	21.49	5.16	14.00	27.81	75.54	20.60
47	E19a_E20a	KnownJunction	0	12.03	24.77	7.27	15.31	19.23	79.22	17.71
48	ER20a	ExonRegion	0	14.21	30.95	9.17	20.94	26.90	88.74	19.49
49	E20a_E22a	KnownJunction	0	15.87	27.80	6.78	20.10	33.59	101.38	20.19
50	ER21a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	ER22a	ExonRegion	0	19.66	27.89	10.94	15.91	41.00	88.25	22.99
52	E22a_E23a	KnownJunction	0	21.53	16.79	15.65	11.49	47.40	105.91	24.88
53	ER23a	ExonRegion	0	24.38	23.78	12.71	18.15	30.88	104.36	23.01
54	E23a_E24a	KnownJunction	0	31.11	31.47	13.74	16.28	20.01	131.88	26.66
55	ER24a	ExonRegion	0	26.13	19.70	16.97	16.17	45.83	100.95	26.87
56	E24a_E25a	KnownJunction	1	12.92	16.66	4.40	8.02	22.18	77.37	24.76
57	ER25a	ExonRegion	0	12.42	20.10	9.53	8.30	28.15	81.24	22.93
58	E25a_E26a	KnownJunction	0	17.79	18.78	12.34	17.39	53.87	118.72	35.58
59	ER26a	ExonRegion	0	28.31	16.54	12.26	12.47	50.30	106.07	35.74
60	E26a_E27a	KnownJunction	1	32.26	21.28	7.93	10.24	27.76	101.84	24.97
61	ER27a	ExonRegion	0	21.70	17.67	14.21	13.69	35.88	100.26	28.80
62	E27a_E28a	KnownJunction	0	29.12	19.26	13.82	13.52	29.00	114.97	31.93
63	ER28a	ExonRegion	0	27.32	19.18	14.76	14.66	49.15	115.75	28.96
64	E28a_E30a	KnownJunction	0	16.67	18.68	11.93	14.44	45.69	95.43	22.97
65	ER29a	ExonRegion	0	0.00	0.00	0.08	0.00	0.10	0.31	0.00
66	ER30a	ExonRegion	0	16.56	20.28	7.00	10.59	28.75	75.90	22.51
67	E30a_E31a	KnownJunction	0	18.48	21.88	12.23	12.90	27.55	94.76	23.72
68	ER31a	ExonRegion	0	21.43	17.94	12.54	12.79	47.03	109.31	24.88
69	E31a_E32a	KnownJunction	0	28.91	21.44	12.43	16.66	36.38	110.04	35.05
70	ER32a	ExonRegion	0	24.58	28.63	10.99	14.79	38.11	126.97	28.64
71	E32a_E33a	KnownJunction	0	24.70	28.27	14.63	14.25	34.74	171.87	35.30
72	E33_Aa	NovelBoundary	0	15.94	13.27	6.73	6.31	11.55	90.88	15.65
73	ER33a	ExonRegion	0	25.27	23.94	8.70	13.21	36.82	119.01	23.34
74	E33a_E34a	KnownJunction	0	14.95	22.12	3.98	10.27	29.25	98.78	15.84
75	ER34a	ExonRegion	0	18.68	22.76	6.73	9.18	25.05	106.70	16.54
76	E34a_E35a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
77	E34a_E36a	KnownJunction	0	16.71	26.09	4.79	11.54	25.91	82.14	14.19
78	E35_Aa	NovelBoundary	0	393.97	199.74	273.09	144.64	357.34	111.06	176.26
79	ER35a	ExonRegion	0	1.39	0.73	0.41	0.00	0.30	1.48	0.00
80	ER36a	ExonRegion	0	18.59	18.95	8.54	9.11	26.96	99.54	14.68
81	E36a_E37a	KnownJunction	0	16.56	15.50	10.19	6.23	36.45	105.64	15.01
82	ER37a	ExonRegion	1	16.08	20.63	9.47	5.91	32.39	102.33	15.84
83	E37a_E38a	KnownJunction	0	15.07	21.96	9.24	7.12	44.08	104.97	15.89
84	ER38a	ExonRegion	0	15.26	15.42	7.78	6.02	27.35	85.93	12.45
85	E38a_E39a	KnownJunction	0	21.45	11.74	10.26	6.23	26.37	83.62	13.61
86	ER39a	ExonRegion	0	20.10	19.56	10.28	9.46	26.90	93.15	13.50
87	E39a_E40a	KnownJunction	1	14.55	9.48	6.75	7.40	30.98	95.73	13.24
88	ER40a	ExonRegion	0	21.81	20.88	10.28	6.23	34.46	93.54	16.41
89	E40a_E41a	KnownJunction	1	19.31	13.35	9.41	5.63	36.98	101.60	23.39
90	I40_SR2	SilentIntronRegion	1	10.31	3.23	2.24	2.87	2.53	19.20	0.23
91	ER41a	ExonRegion	0	28.43	13.74	15.49	10.00	45.76	98.72	21.48
92	IG5_AR3	ActiveIntergenicRegion	0	10.61	9.14	7.56	8.41	32.14	75.28	13.00