Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PDSS1	Gene	0	12.85	6.78	45.73	17.87	60.39	7.70	26.51
2	376201	Transcript	0	1.53	0.70	6.93	2.05	0.87	0.82	1.13
3	376203	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	376215	Transcript	0	0	0	0	0	0	0	0
5	396343	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	359909	Transcript	0	2.20	1.16	6.45	1.84	11.62	1.09	1.56
7	ER1a	ExonRegion	0	0.00	1.88	0.70	2.20	0.79	0.81	0.47
8	E1a_E4b	KnownJunction	0	0.00	1.44	0.82	2.57	2.31	1.58	1.59
9	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER3a	ExonRegion	0	0.46	1.47	2.83	0.75	2.88	0.00	1.22
11	E3a_E4a	KnownJunction	0	1.94	0.00	0.82	0.00	0.00	0.00	0.83
12	E4_Ab	NovelBoundary	0	16.54	19.41	12.01	8.24	6.57	18.06	19.45
13	ER4a	ExonRegion	0	0.00	0.17	0.28	0.06	1.84	0.11	0.18
14	ER4b	ExonRegion	0	0.67	3.64	7.73	4.83	12.05	3.45	6.60
15	E4_Da	NovelBoundary	0	102.39	60.11	79.67	49.63	10.77	39.05	44.59
16	E4a_E5a	KnownJunction	0	1.50	3.10	11.73	9.45	17.68	4.02	8.58
17	ER5a	ExonRegion	1	4.19	5.85	24.93	20.76	51.97	8.09	24.21
18	E5a_E6a	KnownJunction	0	7.58	7.88	42.79	29.53	87.49	7.42	33.78
19	ER6a	ExonRegion	1	8.13	11.74	45.96	28.61	55.08	9.97	38.27
20	E6a_E7a	KnownJunction	0	7.63	11.59	41.89	28.31	58.14	18.60	25.44
21	ER7a	ExonRegion	0	13.61	11.49	62.30	34.92	87.93	17.15	47.10
22	E7a_E8a	KnownJunction	0	15.81	7.30	68.32	21.32	75.45	6.08	26.87
23	I7_AR1	ActiveIntronRegion	0	1.47	0.00	4.14	1.17	12.79	2.24	1.87
24	E8_Aa	NovelBoundary	0	5.79	4.73	13.36	7.15	24.64	2.17	11.85
25	ER8a	ExonRegion	0	20.14	6.61	82.54	29.44	112.32	9.16	35.18
26	E8a_E9a	KnownJunction	0	32.21	8.38	115.74	31.26	169.60	9.78	39.55
27	I8_AR1	ActiveIntronRegion	0	9.44	1.21	12.39	8.55	4.97	2.45	3.57
28	I8_SR2	SilentIntronRegion	0	5.68	0.64	5.07	11.64	3.35	2.29	2.79
29	ER9a	ExonRegion	0	29.81	10.49	110.63	33.17	133.16	4.55	39.96
30	E9_Da	NovelBoundary	0	10.90	2.02	6.93	13.57	0.00	5.17	2.59
31	E9a_E10a	KnownJunction	1	24.30	12.64	92.50	13.09	92.17	5.12	22.86
32	E10_Aa	NovelBoundary	0	7.03	0.00	6.74	17.69	0.99	1.15	1.38
33	ER10a	ExonRegion	0	20.20	11.91	81.99	21.86	89.69	11.50	36.37
34	E10_Da	NovelBoundary	0	5.67	1.94	12.62	4.17	11.90	0.00	4.93
35	E10a_E11a	KnownJunction	1	4.82	7.28	56.27	6.07	101.57	1.66	22.34
36	E10b_E11a	KnownJunction	1	6.39	2.99	21.86	6.56	41.75	4.23	4.00
37	E10b_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	ER10b	ExonRegion	0	3.07	2.43	13.55	2.49	31.58	1.23	5.73
39	I10	Intron	0	6.25	3.37	5.92	8.59	1.90	3.60	3.68
40	I10_AR2	ActiveIntronRegion	0	10.01	3.66	6.81	11.98	1.93	4.80	4.00
41	I10_SR2	SilentIntronRegion	0	4.33	3.82	4.78	10.29	1.25	1.70	4.48
42	ER11a	ExonRegion	0	9.65	8.86	65.55	13.85	115.43	3.97	30.11
43	E11_Da	KnownBoundary	0	14.12	8.17	61.25	26.60	96.48	7.69	31.33
44	ER11b	ExonRegion	0	14.60	9.15	63.45	20.82	104.90	9.49	39.55
45	E11b_E12a	KnownJunction	0	16.17	10.11	60.54	18.67	113.44	11.36	44.38
46	I11	Intron	0	4.95	5.04	3.05	8.44	1.09	0.64	2.82
47	I11_SR1	SilentIntronRegion	0	5.28	5.23	3.25	9.01	1.15	0.70	3.00
48	E12_Aa	NovelBoundary	0	5.41	12.14	7.50	21.78	0.00	2.87	2.59
49	ER12a	ExonRegion	0	15.00	7.08	61.54	28.63	88.05	16.24	42.24
50	E12_Da	NovelBoundary	0	9.70	7.96	7.93	12.30	6.13	0.00	8.38
51	E12a_E13a	KnownJunction	0	2.62	1.39	9.69	4.09	1.18	1.55	1.66
52	E12a_E14a	KnownJunction	1	5.51	5.41	32.88	29.26	71.79	4.93	26.31
53	I12_AR1	ActiveIntronRegion	1	9.57	7.82	11.06	12.84	7.85	3.82	9.96
54	ER13a	ExonRegion	0	0.44	0.00	4.18	0.00	0.56	0.09	0.59
55	E13_Da	NovelBoundary	0	4.51	1.63	10.55	4.20	12.79	8.92	5.29
56	I13	Intron	0	7.96	4.45	12.59	3.86	8.62	2.34	7.47
57	I13_SR1	SilentIntronRegion	0	7.98	4.46	12.62	3.87	8.64	2.34	7.49
58	E14_Aa	NovelBoundary	1	14.37	2.84	30.61	6.29	11.25	3.08	4.87
59	ER14a	ExonRegion	0	17.32	7.96	43.54	22.31	96.04	7.27	39.70
60	E14a_E15a	KnownJunction	0	18.64	10.61	43.43	25.44	103.90	7.42	43.60
61	I14	Intron	0	11.26	3.45	9.34	3.40	2.62	1.95	3.04
62	I14_SR2	SilentIntronRegion	0	13.26	4.99	11.92	5.17	4.35	1.08	1.86
63	I14_SR3	SilentIntronRegion	0	16.47	4.34	12.01	7.24	2.69	1.91	4.77
64	I14_AR2	ActiveIntronRegion	0	15.49	6.80	14.40	2.90	1.52	3.96	3.22
65	I14_SR5	SilentIntronRegion	0	10.50	2.19	8.39	2.95	3.18	2.09	2.93
66	E15_Aa	NovelBoundary	0	12.22	4.12	23.38	6.29	6.41	0.00	6.92
67	ER15a	ExonRegion	0	16.91	6.35	40.23	13.11	44.37	8.28	24.85