Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PITRM1	Gene	0	329.63	502.09	401.32	281.37	95.08	362.19	295.73
2	380980	Transcript	0	7.81	53.36	4.63	14.58	0.62	23.68	3.46
3	380989	Transcript	0	6.87	18.29	10.45	7.86	2.68	6.84	9.12
4	224949	Transcript	0	0.38	0.00	0.00	0.00	0.00	0.00	0.08
5	380978	Transcript	0	26.02	105.47	16.57	92.28	0.28	118.01	5.85
6	380994	Transcript	1	53.03	23.84	23.43	16.13	1.07	15.97	4.40
7	IG17_AR86	ActiveIntergenicRegion	0	4127.00	3873.70	1779.45	1104.37	36.14	1313.56	896.34
8	IG17_SR71	SilentIntergenicRegion	0	5.90	11.24	3.61	1.66	0.00	4.77	5.46
9	IG17_AR85	ActiveIntergenicRegion	0	28.31	36.26	12.29	12.06	0.00	9.43	25.62
10	IG17_SR70	SilentIntergenicRegion	0	20.10	15.66	11.69	10.62	0.05	6.70	10.86
11	IG17_AR84	ActiveIntergenicRegion	0	12.18	8.35	4.08	7.31	0.00	1.83	2.57
12	IG17_SR69	SilentIntergenicRegion	0	15.77	7.17	7.63	4.50	0.07	1.68	1.22
13	IG17_AR83	ActiveIntergenicRegion	0	13.08	10.70	9.37	7.53	0.00	4.08	1.38
14	IG17_SR68	SilentIntergenicRegion	0	4.31	8.52	2.23	1.93	0.00	0.81	0.27
15	IG17_AR81	ActiveIntergenicRegion	0	17.99	10.93	7.37	6.23	0.00	4.20	1.89
16	IG17_SR67	SilentIntergenicRegion	0	21.97	10.12	11.44	7.58	0.02	6.50	1.29
17	IG17_AR80	ActiveIntergenicRegion	0	11.19	12.92	7.60	8.65	0.00	9.22	0.66
18	ER1a	ExonRegion	0	0.31	0.00	0.00	0.00	0.00	0.25	0.27
19	ER1b	ExonRegion	0	69.65	184.52	73.14	117.88	32.30	81.20	101.20
20	E1a_E2a	KnownJunction	0	349.45	517.73	340.45	313.58	110.93	241.68	354.00
21	E1a_E3a	NovelJunction	0	0.00	11.51	0.62	11.70	0.00	4.26	0.89
22	ER2a	ExonRegion	0	143.52	426.52	155.74	200.31	38.13	222.02	179.06
23	E2a_E3a	KnownJunction	0	88.99	679.38	142.90	284.78	34.05	362.73	179.64
24	ER3a	ExonRegion	0	474.12	693.01	521.50	356.75	105.64	468.63	395.73
25	E3a_E4a	KnownJunction	0	405.05	707.52	516.53	326.04	281.31	507.37	415.90
26	ER4a	ExonRegion	0	331.51	854.65	502.36	374.91	116.53	605.47	352.29
27	E4a_E5a	KnownJunction	0	360.87	874.26	639.41	369.17	96.13	687.68	401.25
28	ER5a	ExonRegion	0	360.54	764.91	582.94	352.60	99.84	551.01	357.96
29	E5a_E6a	KnownJunction	0	350.31	732.68	537.65	371.72	112.61	612.29	371.89
30	ER6a	ExonRegion	0	328.77	659.18	488.88	327.44	80.23	481.59	338.95
31	E6a_E7a	KnownJunction	0	360.15	681.19	468.66	345.68	94.01	474.84	317.04
32	E6a_E7b	NovelJunction	0	0.00	8.25	7.56	6.20	0.00	13.21	2.28
33	E6b_E7b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER6b	ExonRegion	0	0.77	0.00	0.00	0.00	0.00	0.00	0.17
35	E7_Ab	NovelBoundary	1	139.39	4.18	169.60	0.00	0.00	0.00	0.85
36	ER7a	ExonRegion	0	355.94	692.23	481.21	344.91	97.02	481.33	333.38
37	ER7b	ExonRegion	0	384.03	650.68	536.00	357.67	126.23	458.87	407.41
38	E7a_E8a	KnownJunction	0	508.36	710.38	678.37	386.64	139.15	459.32	491.41
39	E8_Ab	NovelBoundary	0	575.64	695.77	710.18	345.95	126.86	448.09	475.92
40	ER8a	ExonRegion	0	569.50	752.46	728.55	377.45	135.93	466.92	527.82
41	ER8b	ExonRegion	0	491.99	700.15	668.65	355.12	126.59	463.11	467.59
42	E8a_E9a	KnownJunction	0	398.00	657.76	595.49	331.22	121.40	466.50	447.00
43	E8a_E10a	NovelJunction	0	0.73	9.06	1.48	6.42	0.00	10.85	0.87
44	ER9a	ExonRegion	0	418.60	626.59	627.12	320.86	143.46	391.48	466.08
45	E9a_E10a	KnownJunction	0	378.03	585.41	531.21	303.72	128.82	332.77	354.20
46	ER10a	ExonRegion	0	337.63	603.05	519.72	316.21	115.48	315.21	380.28
47	E10a_E11a	KnownJunction	0	269.49	597.57	465.05	310.33	104.06	274.00	325.15
48	ER11a	ExonRegion	0	208.32	557.11	370.80	325.81	62.06	285.69	292.07
49	E11_Ab	KnownBoundary	0	271.45	562.52	443.73	331.30	78.15	270.17	340.67
50	ER11b	ExonRegion	0	327.99	571.32	529.43	342.91	111.10	282.81	375.15
51	E11a_E12a	KnownJunction	0	378.28	529.58	576.60	315.53	135.27	275.53	354.32
52	ER12a	ExonRegion	0	456.53	480.71	687.59	316.34	118.72	284.58	368.45
53	E12_Da	KnownBoundary	0	18.91	15.61	18.38	14.36	0.00	6.32	3.81
54	E12a_E12b	KnownJunction	0	335.30	492.48	588.54	317.81	100.23	289.81	354.56
55	E12a_E13a	NovelJunction	1	0.00	10.69	1.62	1.68	0.00	11.87	6.86
56	ER12b	ExonRegion	0	53.03	23.84	23.43	16.13	1.07	15.97	4.40
57	E12_Ab	KnownBoundary	0	80.23	58.30	24.54	36.95	0.00	53.95	3.15
58	ER12c	ExonRegion	0	509.30	509.75	698.15	300.65	115.81	343.25	333.43
59	E12b_E13a	KnownJunction	0	546.48	482.00	755.03	276.57	146.45	379.83	389.23
60	ER13a	ExonRegion	0	381.99	512.73	521.72	285.39	97.67	322.50	322.92
61	E13a_E14a	KnownJunction	0	446.89	581.18	599.88	281.72	118.28	349.95	363.56
62	ER14a	ExonRegion	0	341.70	545.83	469.52	279.01	114.67	353.73	359.22
63	E14_Da	NovelBoundary	0	27.94	154.90	13.54	99.56	0.00	121.00	6.89
64	E14a_E15a	KnownJunction	0	270.39	390.42	423.55	185.71	123.38	258.32	353.47
65	ER15a	ExonRegion	0	312.41	499.61	419.22	256.55	103.84	312.94	353.12
66	E15_Da	NovelBoundary	1	61.95	97.52	43.89	89.83	6.50	32.05	15.49
67	E15a_E16a	KnownJunction	0	176.93	437.68	243.13	185.25	63.51	229.27	250.86
68	E15a_E18a	NovelJunction	0	0.77	17.37	0.59	13.57	7.61	34.12	3.10
69	I15	Intron	1	59.61	98.79	37.69	69.57	5.58	35.55	17.80
70	I15_AR1	ActiveIntronRegion	1	62.92	99.61	38.66	71.38	5.73	35.22	18.05
71	I15_SR1	SilentIntronRegion	0	43.88	96.60	33.49	61.58	4.98	38.00	16.92
72	ER16a	ExonRegion	0	240.69	492.88	342.75	236.92	86.33	284.93	308.80
73	E16a_E17a	KnownJunction	0	220.04	501.44	293.31	211.93	72.64	271.70	224.87
74	E16b_E17a	KnownJunction	1	6.06	17.55	9.83	2.41	2.12	5.92	8.13
75	ER16b	ExonRegion	0	7.68	19.03	11.06	13.30	3.24	7.76	10.12
76	E17_Aa	NovelBoundary	0	19.26	93.95	13.31	83.85	5.44	43.66	21.77
77	ER17a	ExonRegion	0	208.95	467.63	299.76	214.15	77.43	279.81	264.86
78	E17a_E18a	KnownJunction	0	202.37	399.22	280.78	198.28	55.79	255.54	266.38
79	ER18a	ExonRegion	0	291.53	474.33	349.43	271.75	93.56	336.80	290.06
80	E18a_E19a	KnownJunction	0	426.48	547.31	425.45	351.15	119.48	427.32	295.80
81	ER19a	ExonRegion	0	545.02	685.79	566.26	399.27	141.32	482.10	405.73
82	E19a_E20a	KnownJunction	0	608.11	777.27	572.49	486.18	138.92	551.38	427.81
83	ER20a	ExonRegion	0	608.63	685.61	616.32	459.50	170.69	485.36	443.66
84	E20a_E21a	KnownJunction	0	539.14	584.43	530.96	378.87	162.71	436.57	378.88
85	ER21a	ExonRegion	0	417.28	538.98	442.58	367.89	144.30	433.63	378.80
86	E21a_E22a	KnownJunction	0	30.11	129.54	16.11	116.95	0.00	145.95	6.19
87	E21a_E23a	KnownJunction	0	285.40	377.26	342.17	217.76	117.85	278.66	343.27
88	ER22a	ExonRegion	0	21.92	81.40	17.04	67.61	0.55	90.06	5.50
89	E22_Da	NovelBoundary	1	136.31	280.76	61.63	175.44	7.22	237.96	31.41
90	E23_Aa	NovelBoundary	0	51.59	199.85	26.57	123.21	0.92	175.06	10.38
91	ER23a	ExonRegion	0	390.47	611.84	520.20	359.17	156.11	485.14	434.74
92	E23a_E24a	KnownJunction	0	1.03	28.61	1.39	10.19	0.00	16.86	1.68
93	E23a_E25a	KnownJunction	0	297.83	516.89	471.45	301.55	148.53	411.86	408.09
94	I23_SR1	SilentIntronRegion	1	89.49	115.00	26.26	46.73	3.32	35.15	12.85
95	ER24a	ExonRegion	0	14.58	78.11	7.86	18.97	1.24	30.49	5.23
96	E24_Da	NovelBoundary	0	39.82	150.38	15.20	57.05	3.87	56.20	10.26
97	I24_AR1	ActiveIntronRegion	0	52.58	121.28	31.18	39.11	2.55	39.17	14.01
98	I24_AR2	ActiveIntronRegion	1	71.78	159.72	33.11	46.21	3.33	41.68	14.80
99	I24_AR3	ActiveIntronRegion	1	57.84	118.81	23.98	37.66	1.19	33.22	14.30
100	E25_Aa	NovelBoundary	1	112.71	152.58	27.26	70.38	12.75	62.39	26.87
101	ER25a	ExonRegion	0	582.54	680.67	585.45	445.16	188.35	602.00	457.89
102	E25a_E26a	KnownJunction	0	720.14	712.09	618.99	395.50	123.84	556.42	368.56
103	ER26a	ExonRegion	0	668.83	750.72	607.07	486.14	181.00	683.85	517.91
104	E26_Da	NovelBoundary	1	215.68	308.53	64.47	203.02	23.17	255.54	50.32
105	E26a_E27a	KnownJunction	0	680.82	547.71	566.22	360.39	196.39	542.00	400.45
106	I26	Intron	0	55.68	166.97	21.90	94.85	6.17	124.26	30.44
107	I26_SR1	SilentIntronRegion	1	75.53	172.65	27.43	102.41	8.58	131.66	31.32
108	I26_AR1	ActiveIntronRegion	0	31.50	161.16	15.22	86.15	3.22	115.95	29.55
109	E27_Aa	NovelBoundary	0	14.15	184.50	15.25	105.55	3.09	131.21	30.61
110	ER27a	ExonRegion	0	461.25	569.92	393.49	371.43	130.96	515.28	367.50
111	E27a_E28a	KnownJunction	0	485.19	551.31	336.87	359.82	104.87	545.67	333.16
112	ER28a	ExonRegion	0	285.92	472.95	260.06	296.23	70.63	473.23	193.88
113	ER28b	ExonRegion	0	13.45	28.85	11.01	18.39	9.72	26.05	14.00
114	IG16	Intergenic	0	8.05	22.53	10.76	16.61	3.61	31.51	11.58
115	IG16_SR1	SilentIntergenicRegion	0	4.44	11.14	4.59	4.09	1.17	8.72	2.92
116	IG16_AR1	ActiveIntergenicRegion	0	8.67	24.41	11.76	18.55	4.00	35.10	12.94