Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 TRDMT1 Gene 0 7.44 2.66 7.33 1.40 51.50 1.06 4.22 2 377799 Transcript 0 0.00 0.00 0.70 0.00 1.18 0.00 0.60 3 351358 Transcript 0 1.55 0.00 2.04 4.82 2.14 0.00 0.00 4 354631 Transcript 0 3.29 0.00 6.28 0.00 59.11 1.07 1.93 5 343612 Transcript 0 0.52 0.00 0.43 0.00 2.14 0.00 0.38 6 313936 Transcript 0 1.32 0.00 0.00 0.00 6.20 0.00 0.00 7 358282 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 377766 Transcript 0 0.68 0.00 3.20 0.00 4.10 0.00 0.67 9 396685 Transcript 0 0.08 0.00 0.00 0.00 0.08 0.00 0.00 10 396687 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 IG18_AR2 ActiveIntergenicRegion 0 3.71 5.92 4.22 2.40 7.71 1.84 13.03 12 ER1a ExonRegion 0 1.12 1.82 0.66 0.80 4.78 0.00 0.22 13 E1_Ab KnownBoundary 0 5.61 4.81 2.87 1.16 15.03 0.00 0.73 14 ER1b ExonRegion 0 11.66 5.73 7.49 3.08 58.25 0.00 4.24 15 E1a_E2b KnownJunction 0 8.91 2.71 5.75 2.98 17.13 0.00 4.80 16 ER2a ExonRegion 0 1.21 0.35 0.87 0.36 2.78 0.00 0.67 17 ER2b ExonRegion 0 5.29 4.63 5.99 2.49 20.95 0.15 2.93 18 E2a_E5a KnownJunction 0 1.03 0.00 0.86 0.00 3.23 0.00 0.76 19 E2a_E6a KnownJunction 0 14.90 7.70 13.31 5.01 20.38 1.18 5.59 20 E2a_E7a KnownJunction 0 0.68 0.00 3.20 0.00 4.10 0.00 0.67 21 E2a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E2a_E9a KnownJunction 0 1.32 0.00 0.00 0.00 6.20 0.00 0.00 23 ER3a ExonRegion 0 0.08 0.00 0.00 0.00 0.08 0.00 0.00 24 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 1.06 0.00 0.00 26 I5_AR1 ActiveIntronRegion 0 2.19 0.96 2.41 1.10 11.73 0.48 2.18 27 ER6a ExonRegion 0 11.65 6.39 12.68 4.58 50.45 2.48 5.27 28 E6a_E7a KnownJunction 0 3.29 0.00 6.28 0.00 59.11 1.07 1.93 29 E6a_E8a KnownJunction 0 0.00 0.00 0.70 0.00 1.18 0.00 0.60 30 E6a_E9a KnownJunction 0 1.55 0.00 2.04 4.82 2.14 0.00 0.00 31 ER7a ExonRegion 0 7.72 3.21 9.50 0.00 83.48 2.26 6.11 32 E7a_E8a KnownJunction 0 13.12 1.60 9.69 0.00 65.63 1.29 7.08 33 ER8a ExonRegion 0 12.62 4.56 15.59 1.25 50.38 5.22 5.00 34 E8a_E9a KnownJunction 0 8.66 7.59 14.70 1.08 42.39 2.97 7.01 35 ER9a ExonRegion 0 12.69 8.21 17.55 3.56 66.55 2.68 7.69 36 E9a_E10a KnownJunction 0 10.11 8.04 11.27 3.09 66.69 6.27 5.30 37 ER10a ExonRegion 0 18.45 7.71 15.47 6.38 105.18 3.63 8.46 38 E10a_E11a KnownJunction 0 14.27 4.26 14.26 1.68 81.81 0.00 6.16 39 ER11a ExonRegion 0 20.64 10.70 19.17 4.01 132.42 2.30 10.95 40 E11a_E12a KnownJunction 0 26.85 4.44 11.50 4.50 116.81 6.86 8.13 41 ER12a ExonRegion 0 24.03 6.58 14.83 5.18 147.64 4.50 7.97 42 E12a_E13a KnownJunction 0 23.15 7.43 19.66 3.93 165.63 4.61 5.55 43 ER13a ExonRegion 0 31.71 4.36 19.35 5.54 171.49 3.63 7.91 44 E13a_E14a KnownJunction 0 21.15 1.18 14.59 5.72 113.56 1.58 5.79 45 I13 Intron 0 1.83 0.86 1.30 0.50 11.49 0.18 0.95 46 I13_SR2 SilentIntronRegion 0 1.51 0.39 0.76 0.41 11.95 0.00 0.48 47 I13_AR3 ActiveIntronRegion 0 2.72 0.58 1.51 0.59 18.66 0.17 1.03 48 ER14a ExonRegion 0 15.27 2.06 15.19 1.88 74.33 0.22 6.30 49 E14_Da KnownBoundary 0 9.40 3.97 17.91 0.00 39.95 0.00 2.34 50 ER14b ExonRegion 0 5.40 1.89 5.67 0.96 42.21 0.85 3.56 51 IG17_SR4 SilentIntergenicRegion 0 1.96 0.91 1.29 0.80 7.99 0.39 2.78 52 IG17_SR3 SilentIntergenicRegion 0 4.43 0.51 2.26 0.21 8.82 0.00 1.31