Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	WDR37	Gene	0	58.21	123.94	71.64	73.41	35.98	91.10	105.56
2	358220	Transcript	0	1.30	2.63	0.50	0.44	0.40	2.65	0.49
3	381329	Transcript	0	4.98	30.26	5.87	17.17	1.26	19.44	7.49
4	263150	Transcript	0	2.87	2.04	1.12	0.36	5.64	1.05	0.61
5	IG11	Intergenic	0	6.69	21.05	2.92	13.51	3.08	17.95	2.82
6	IG11_AR1	ActiveIntergenicRegion	0	6.72	21.15	2.93	13.57	3.09	18.03	2.83
7	ER1a	ExonRegion	0	2.61	5.26	1.00	0.89	0.81	5.29	0.97
8	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	I1	Intron	0	7.03	4.83	3.13	2.90	9.77	3.85	2.29
10	I1_AR1	ActiveIntronRegion	1	54.60	26.43	16.16	15.72	16.14	23.12	3.11
11	I1_AR2	ActiveIntronRegion	0	2.74	2.41	2.05	1.53	10.38	1.92	1.89
12	I1_AR4	ActiveIntronRegion	0	2.64	11.14	2.49	3.58	8.38	3.25	4.25
13	E2_Aa	NovelBoundary	0	3.30	23.72	1.94	14.47	17.89	15.60	1.65
14	ER2a	ExonRegion	0	1.68	28.53	2.04	9.78	1.52	17.75	2.97
15	E2a_E4a	KnownJunction	0	4.54	53.49	7.69	34.16	0.00	35.64	12.10
16	ER3a	ExonRegion	0	2.77	4.08	1.60	0.71	7.07	2.09	1.21
17	E3a_E4a	KnownJunction	0	2.97	0.00	0.65	0.00	4.22	0.00	0.00
18	I3_SR2	SilentIntronRegion	1	9.96	0.00	27.01	3.27	1.28	1.23	3.12
19	I3_AR3	ActiveIntronRegion	1	12.19	2.38	21.02	3.04	1.87	1.79	2.15
20	ER4a	ExonRegion	0	52.75	124.65	66.92	71.85	20.51	102.94	70.27
21	E4a_E5a	KnownJunction	0	101.17	190.89	128.17	100.02	52.03	131.67	132.06
22	E4a_E6a	NovelJunction	1	1.75	11.53	10.58	0.00	3.32	3.03	4.24
23	ER5a	ExonRegion	0	125.11	234.68	179.83	125.18	49.89	191.43	158.93
24	E5a_E6a	KnownJunction	0	160.17	235.63	221.46	130.90	45.69	194.83	172.55
25	E6_Aa	NovelBoundary	1	20.14	8.41	14.33	12.62	1.15	12.22	0.77
26	ER6a	ExonRegion	0	130.35	266.66	186.20	143.57	47.97	201.89	192.20
27	E6_Da	NovelBoundary	1	19.18	13.37	10.68	0.00	0.95	2.17	3.48
28	E6a_E7a	KnownJunction	0	80.90	227.04	138.34	108.66	59.45	155.89	159.22
29	ER7a	ExonRegion	0	88.58	220.28	145.25	116.54	57.26	142.01	183.11
30	E7a_E8a	KnownJunction	0	98.37	195.17	142.54	121.10	63.12	129.82	168.67
31	ER8a	ExonRegion	0	76.00	206.03	117.03	98.57	43.62	121.64	165.62
32	E8a_E9a	KnownJunction	0	70.03	222.18	121.70	106.22	39.70	167.61	210.96
33	ER9a	ExonRegion	0	71.41	259.47	113.93	121.93	52.19	159.18	206.69
34	E9a_E10a	KnownJunction	0	64.42	235.65	112.72	121.04	61.62	116.44	182.11
35	I9_SR2	SilentIntronRegion	0	17.43	7.15	8.45	6.97	1.86	5.96	3.12
36	E10_Aa	NovelBoundary	1	17.41	2.73	11.38	4.55	2.17	7.21	4.23
37	ER10a	ExonRegion	0	72.49	229.66	140.59	113.97	53.56	143.66	223.16
38	E10a_E11a	KnownJunction	0	65.44	179.96	121.33	96.66	41.68	140.94	202.59
39	I10	Intron	0	21.39	13.95	12.04	15.04	1.31	9.44	3.86
40	I10_SR1	SilentIntronRegion	0	20.66	17.18	15.62	11.45	1.55	12.80	6.32
41	I10_AR1	ActiveIntronRegion	1	31.21	20.39	20.39	21.37	2.36	11.04	4.19
42	I10_SR3	SilentIntronRegion	0	22.77	13.29	10.70	17.04	0.86	8.48	3.37
43	I10_AR5	ActiveIntronRegion	1	31.70	7.59	9.65	7.98	1.98	5.88	4.01
44	I10_AR6	ActiveIntronRegion	1	20.36	6.57	6.59	6.51	1.21	3.51	2.97
45	ER11a	ExonRegion	0	46.20	148.39	86.35	93.38	36.47	126.21	157.20
46	E11_Da	KnownBoundary	0	7.08	8.75	5.36	11.43	0.00	1.58	5.93
47	E11a_E12a	KnownJunction	0	24.92	76.61	35.62	41.77	29.92	70.70	88.42
48	E11a_E14a	NovelJunction	1	18.31	39.77	8.82	37.58	0.97	29.10	19.13
49	ER11b	ExonRegion	0	8.73	8.75	7.88	7.57	2.26	4.92	7.42
50	I11	Intron	0	17.92	13.89	9.76	7.22	2.42	5.89	8.76
51	I11_SR1	SilentIntronRegion	0	23.02	9.31	9.94	6.68	2.54	4.43	6.14
52	I11_AR2	ActiveIntronRegion	0	15.17	12.51	11.19	3.19	1.58	5.16	6.60
53	I11_SR3	SilentIntronRegion	1	16.19	12.22	6.09	1.95	1.23	5.49	5.58
54	E12_Aa	NovelBoundary	0	25.40	48.94	18.62	34.38	1.98	61.08	11.49
55	ER12a	ExonRegion	0	43.07	136.83	59.10	71.40	31.28	95.21	143.24
56	E12a_E13a	KnownJunction	1	51.47	151.59	81.98	89.97	61.62	110.23	210.53
57	E13_Aa	NovelBoundary	1	35.55	14.74	37.92	2.09	1.96	0.00	8.24
58	ER13a	ExonRegion	0	55.24	162.77	70.25	95.67	40.23	113.53	165.25
59	E13a_E14a	KnownJunction	0	52.62	163.99	70.24	113.08	26.35	125.61	192.60
60	ER14a	ExonRegion	0	76.04	258.58	97.06	149.02	41.70	150.23	184.31
61	E14a_E15a	KnownJunction	0	119.12	351.70	145.30	216.16	90.32	248.54	284.72
62	ER15a	ExonRegion	0	84.79	217.68	91.56	114.43	45.32	122.15	152.94
63	E15a_E16a	KnownJunction	0	37.09	134.30	49.59	60.30	25.50	57.57	75.15
64	ER16a	ExonRegion	0	65.36	121.18	75.09	76.76	42.57	94.25	108.22