Summary page for comparison: 'Amygdala_Ribo_vs_Frontal_Ribo' (HS1813_vs_HS1812) - Project: AllenBrain


Download complete candidate list as tab delimited text file: Amygdala_Ribo_vs_Frontal_Ribo.txt


Summary of Differential (DE) and Alternative Expression (AE) for all gene loci:

Total Candidate Genes: 5,638 (of 49,867 possible genes)

DE Genes: 1,607

AE Genes: 4,833

Alternative Exon Usage (EU) Genes: 3,782

Alernative Exon Skipping (ES) Genes: 634

Alternative Exon Boundary (AB) Genes: 2,126

Intron Retention (IR) Genes: 26

Cryptic Exon (CE) Genes: 294


Candidate Differential AND Alternative Expression Genes

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
116.73AKAP9'protein_coding'2089AELoss-12.055EU AB E49a_E50a100.00
226.41BRAF'protein_coding'528AEGain12.394EU ES E4a_E5a100.00
336.23RPE'protein_coding'1838AEGain7.818EU AB CE E11_Da100.00
446.04AAGAB'protein_coding'110AELoss-29.001CE I1_AR50
556.01ITCH'protein_coding'638AELoss-7.145EU AB E26_Da50.00
665.83ZNF480'protein_coding'615AELoss-8.164EU ER2a66.67
775.82CAMSAP1'protein_coding'1342AELoss-13.314EU IR E14a_E15b50.00
885.79DYNC1I2'protein_coding'2867AELoss-8.258EU AB E19_Da100.00
995.75TRIP12'protein_coding'1776AELoss-11.8810EU ES AB E9b_E11a42.86
10105.68CTSB'protein_coding'620AEGain9.611AB E7_Da0
11115.68ABLIM3'protein_coding'327AEGain7.414EU ES ENST0000032668566.67
12125.56PCLO'protein_coding'1446AELoss-10.2714EU E1a_E2a46.15
13135.52PHACTR2'protein_coding'1128AEGain11.774EU ER16a0.00
14145.43MTSS1'protein_coding'624AELoss-7.973EU AB CE E1_Ab0
15155.41GNL3L'protein_coding'530AEGain7.755EU AB ER11b0.00
16165.36SEC22C'protein_coding'1644AEGain6.005EU AB ER13d100.00
17175.33SFRS18'protein_coding'1032AELoss-10.104EU AB E2_Db0.00
18185.33WRN'protein_coding'135AELoss-7.455EU E25a_E26a50.00
19195.30RB1CC1'protein_coding'225AELoss-8.461AB E14_Da0
20205.29UBR1'protein_coding'249AEGain10.086EU AB E30_Aa0.00
21215.28KIAA1731'protein_coding'331AELoss-7.274EU AB E29_Aa0.00
22225.27PLEKHM3'protein_coding'618AEGain9.656EU ES AB E7_Da50.00
23235.24DOPEY2'protein_coding'852AEGain5.428EU AB E35_Aa33.33
24245.21RNF213'protein_coding'244AELoss-7.0411EU AB E40_Aa28.57
25255.21AC008268.2'processed_transcript'26AELoss-7.341AB E2_Aa0
26265.19FMN2'protein_coding'836AEGain8.103AB E3_Ac0
27275.19GGA3'protein_coding'217AEGain7.614EU AB E16_Aa100.00
28285.15HHIP'protein_coding'214AELoss-5.081AB E3_Da0
29295.15RP11-534G20.1'processed_transcript'1023AELoss-6.744EU AB E7_Aa100.00
30305.15DTNBP1'protein_coding'619AELoss-9.782EU ES E8a_E10a0.00
31315.12NAT5'protein_coding'715AEGain8.482AB CE E2_Aa0
32325.12PIK3C2A'protein_coding'132AELoss-10.421EU E26a_E27a0
33335.10ASPH'protein_coding'934AEGain9.445EU ES E12a_E14a33.33
34345.07MAP4'protein_coding'2365AELoss-6.0630EU ES AB E2a_E3b62.50
35355.07RBM25'protein_coding'119AELoss-7.641AB E8_Aa0
36365.07CIC'protein_coding'120AELoss-7.322EU E7a_E8a0.00
37375.05ACAD8'protein_coding'211AEGain6.134EU AB E6_Aa0.00
38385.05EEA1'protein_coding'231AELoss-8.242EU AB E11_Aa0
39395.03ACYP2'protein_coding'515AEGain7.032EU ER7a0.00
40405.03PHF3'protein_coding'421AELoss-7.481AB E16_Da0
41415.02ARRDC4'protein_coding'18AELoss-5.211AB E3_Aa0
42425.02LUC7L2'protein_coding'824AELoss-8.516EU ES AB E5_Ab0.00
43435.01SEMA6B'protein_coding'320AELoss-6.523EU AB E16_Ac0.00
44445.01CDC42BPA'protein_coding'1557AELoss-8.785EU ES AB E34_Da50.00
45455.00UBN1'protein_coding'219AELoss-9.592EU AB E2_Ab0
46464.99SOS1'protein_coding'1041AELoss-8.273EU AB E5_Da0
47474.99PPP4C'protein_coding'19AELoss-9.631EU E7a_E8a0
48484.98TMCO3'protein_coding'1031AELoss-6.382EU AB E10_Aa0
49494.97API5'protein_coding'418AEGain7.061AB E6_Da0
50504.97HNRNPL'protein_coding'419AEGain6.392EU AB E8_Da0
51514.96PTPRD'protein_coding'1566AELoss-9.1034EU ES AB IR CE E2a_E3b48.28
52524.95OPCML'protein_coding'2046AEGain5.467EU AB CE I3_AR7100.00
53534.94FNTB'protein_coding'421AEGain8.692EU E6a_E7a100.00
54544.92PPME1'protein_coding'216AEGain7.031AB E9_Aa0
55554.92REL'protein_coding'315AELoss-7.012EU E1a_E2a0.00
56564.88RPP30'protein_coding'1333AEGain8.211AB E12_Da0
57574.88DDAH1'protein_coding'923AEGain7.001CE I3_AR30
58584.87ITGB1'protein_coding'2258AELoss-6.071AB E24_Aa0
59594.87LPHN2'protein_coding'2959AEGain6.1316EU ES AB E17a_E19b18.18
60604.85OAT'protein_coding'724AEGain4.823EU ES AB E7_Da100.00
61614.85PLCL1'protein_coding'618AELoss-5.982EU AB E1_Ab0
62624.81BTBD9'protein_coding'925AELoss-16.512EU E12a_E13a0.00
63634.81AFF3'protein_coding'1960AELoss-9.017EU AB CE E34_Db0.00
64644.79C2orf37'protein_coding'1032AELoss-8.785AB CE E16_Db0
65654.78STX16'protein_coding'2455AELoss-8.877EU ES AB E1f_E4a33.33
66664.78MED12'protein_coding'1274AELoss-6.714EU AB E5a_E6a0.00
67674.77MTMR9'protein_coding'110AEGain6.101AB E2_Da0
68684.77PGM2L1'protein_coding'114AEGain8.002EU CE I1_AR10
69694.76KIAA1217'protein_coding'1841AELoss-8.134EU AB CE E24_Aa0
70704.76NAV2'protein_coding'546AELoss-7.544EU AB E23_Aa0.00
71714.74EXOC6B'protein_coding'937AELoss-6.083EU AB E2_Da0
72724.74ZNF780A'protein_coding'615AEGain6.951AB E8_Ab0
73734.74ZCCHC6'protein_coding'1142AELoss-6.873EU E15c_E16a0.00
74744.73BAT2'protein_coding'1877AELoss-7.174EU AB E8_Aa0.00
75754.73DTX3'protein_coding'28AELoss-14.361ES E1a_E3a0
76764.73RAB11FIP3'protein_coding'1437AELoss-7.515EU AB E10_Db0
77774.70FAT3'protein_coding'534AEGain5.213EU ES AB E10_Aa0.00
78784.70MKL1'protein_coding'1338AELoss-14.263EU ES E4a_E7d50.00
79794.70ADCY6'protein_coding'324AELoss-5.952EU E4a_E5a100.00
80804.69FLNA'protein_coding'2285AELoss-7.418EU AB E12c_E13a0.00
81814.69PRMT7'protein_coding'422AEGain6.472EU AB E3_Aa0
82824.69MED1'protein_coding'219AELoss-6.951AB E18_Aa0
83834.68VPS24'protein_coding'1333AEGain6.373AB E3_Aa0
84844.68SYCP2'protein_coding'1162AEGain7.168EU AB E38_Da50.00
85854.67NDEL1'protein_coding'517AEGain6.522EU E9a_E10a100.00
86864.67NARG1L'protein_coding'1342AELoss-7.303EU AB E16_Da0
87874.66REEP5'protein_coding'411AEGain6.071AB E5_Da0
88884.66RNF220'protein_coding'2456AELoss-6.3018EU AB CE E11a_E12c33.33
89894.66CD47'protein_coding'621AEGain4.897EU ES AB E9a_E13a75.00
90904.66ANKIB1'protein_coding'733AELoss-5.992EU AB E8_Aa0
91914.66ATP11A'protein_coding'1860AELoss-5.777EU ES AB CE I3_AR1233.33
92924.65PTPDC1'protein_coding'415AELoss-7.102EU AB E11_Aa0
93934.63AC012621.2'protein_coding'420AELoss-4.736EU AB E7_Da75.00
94944.62RP11-357C3.2'processed_transcript'26AELoss-7.811EU E1a_E2a0
95954.62NARG1'protein_coding'733AEGain6.741AB E16_Ab0
96964.61NASP'protein_coding'1235AELoss-9.066EU ER2d80.00
97974.60PHIP'protein_coding'345AELoss-6.874EU AB E32_Aa0.00
98984.58DDR1'protein_coding'2556AELoss-5.775EU AB E14_De0.00
99994.58TBC1D5'protein_coding'3180AELoss-5.826EU E37a_E38a80.00
1001004.57HDAC8'protein_coding'2253AEGain5.354EU CE I15_AR2100.00
1011014.56ADH5'protein_coding'19AEGain6.241EU E2a_E3a0
1021024.56LRRC20'protein_coding'711AEGain6.651EU E3a_E4a0
1031034.56PKD2'protein_coding'115AELoss-5.562AB E11_Da0
1041044.55RIMS1'protein_coding'1544AELoss-6.732EU AB E20_Da0
1051054.55ALG13'protein_coding'2372AELoss-8.257EU AB E2_Ai100.00
1061064.54TAF2'protein_coding'126AELoss-7.662EU AB E9_Da0
1071074.54C16orf70'protein_coding'116AEGain6.316EU AB E11_Aa50.00
1081084.54PRKD1'protein_coding'734AELoss-6.882EU ES E16a_E18a0.00
1091094.54IWS1'protein_coding'1654AELoss-5.706EU AB E20_Da0
1101104.54RHOJ'protein_coding'28AELoss-6.151EU E1a_E2a0
1111114.54C5orf42'protein_coding'337AELoss-6.727EU AB I31_SR10.00
1121124.53XPC'protein_coding'831AELoss-5.911EU E9a_E10a0
1131134.53ATF7IP'protein_coding'217AELoss-7.114EU E1a_E2a33.33
1141144.53CDK2AP1'protein_coding'14AELoss-6.921EU E1a_E2a0
1151154.52ZNF318'protein_coding'211AELoss-6.401AB E7_Aa0
1161164.52CHD1'protein_coding'237AELoss-6.312EU AB E11_Aa0
1171174.52STOX2'protein_coding'25AEGain7.521AB E3_Aa0
1181184.52MRAS'protein_coding'921AEGain5.351AB E6_Aa0
1191194.51TCF12'protein_coding'527AELoss-5.776EU AB CE I5_AR200.00
1201204.51SEPT2'protein_coding'47102AELoss-6.494AB E9_Aa0
1211214.51SLIT1'protein_coding'1056AELoss-5.761EU E43b_E44a0
1221224.50STRBP'protein_coding'1042AEGain5.897AB CE E5_Aa0
1231234.50RANGAP1'protein_coding'1033AEGain7.132EU AB E6_Ad0
1241244.49SH3YL1'protein_coding'3070AELoss-13.567EU AB CE E9_Da33.33
1251254.49AC137834.1'protein_coding'392AELoss-7.712EU E84a_E85a0.00
1261264.48EFTUD1'protein_coding'220AELoss-6.331ES E5a_E7a0
1271274.48RPS14'protein_coding'38AELoss-6.821EU ER1d0
1281284.48LRBA'protein_coding'158AELoss-6.484EU AB E29_Aa0.00
1291294.47CUL1'protein_coding'327AEGain5.651AB E14_Aa0
1301304.47ANAPC5'protein_coding'321AELoss-6.841AB E3_Aa0
1311314.46PDHB'protein_coding'1034AEGain4.0110EU AB ER3g75.00
1321324.46TRIO'protein_coding'259AELoss-12.387EU AB E4_Da0.00
1331334.46NCBP1'protein_coding'530AELoss-14.337EU E12a_E13a66.67
1341344.45PEX3'protein_coding'316AEGain5.392EU AB E10_Da0
1351354.45CUGBP1'protein_coding'619AEGain5.095EU E15a_E16a75.00
1361364.45LAMA2'protein_coding'879AELoss-5.1412EU AB E58_Aa50.00
1371374.44UBA1'protein_coding'1249AELoss-7.383EU AB E20_Aa0
1381384.43COPA'protein_coding'745AEGain6.193EU AB E17_Ab0.00
1391394.43DUT'protein_coding'413AEGain6.681AB E5_Da0
1401404.43TMCO1'protein_coding'621AEGain5.951AB E9_Dc0
1411414.43PRUNE2'protein_coding'1951AELoss-5.4917EU ES AB E24a_E25a46.15
1421424.43MAPKAP1'protein_coding'2350AELoss-8.645EU ES AB E1_Ag100.00
1431434.43ZNF644'protein_coding'1331AELoss-6.422ES AB E6_Db0
1441444.42KIAA0226'protein_coding'1342AELoss-6.554EU AB E2_Aa50.00
1451454.42ACBD5'protein_coding'928AELoss-5.283EU E6a_E7a0.00
1461464.41ARMCX5'protein_coding'1341AELoss-15.7810EU ES AB E5b_E7a12.50
1471474.41WDR13'protein_coding'1441AELoss-7.053EU AB E2_Df0.00
1481484.41CYB5R4'protein_coding'321AEGain5.154EU E14a_E15a66.67
1491494.41APBA2'protein_coding'319AELoss-17.372EU E11a_E12a0.00
1501504.41PAK2'protein_coding'420AELoss-5.351AB E13_Da0
1511514.41SF4'protein_coding'216AELoss-5.871AB E6_Aa0
1521524.41C2orf84'protein_coding'1344AELoss-6.653EU ER2c0.00
1531534.40TEX10'protein_coding'424AELoss-7.242AB E3_Db0
1541544.40PEX5L'protein_coding'1953AEGain5.1415EU ES AB CE E3_Ac57.14
1551554.40KIF27'protein_coding'623AELoss-6.351AB E12_Db0
1561564.40FAM49A'protein_coding'624AEGain4.851AB E6_Aa0
1571574.39PDS5A'protein_coding'337AELoss-7.582AB E30_Da0
1581584.39SHANK2'protein_coding'2380AEGain6.425EU ES AB E55b_E56a0.00
1591594.39PLD3'protein_coding'1542AEGain6.006EU ES CE I1_AR350.00
1601604.38RAPGEF5'protein_coding'1453AELoss-6.4211EU ES AB CE E1a_E4a28.57
1611614.38CHD6'protein_coding'957AELoss-6.598EU ES AB E5_Aa0.00
1621624.38NRSN2'protein_coding'514AEGain5.451AB E1_Ad0
1631634.38MAGED2'protein_coding'1744AEGain6.634EU ES AB ER2b50.00
1641644.38CENPV'protein_coding'411AEGain5.402EU E4a_E5a0.00
1651654.38NUMA1'protein_coding'427AELoss-5.612EU AB E21_Aa0
1661664.38RUFY2'protein_coding'1340AELoss-6.625EU AB E7_Aa0
1671674.37UBAP2L'protein_coding'2369AELoss-6.186EU ES AB CE E28_Da66.67
1681684.37DAZAP1'protein_coding'313AEGain5.791AB E7_Da0
1691694.37AUP1'protein_coding'1239AELoss-7.513EU E2a_E2b0.00
1701704.37PARD3'protein_coding'1135AELoss-6.252EU E19a_E20a0.00
1711714.36SLU7'protein_coding'116AEGain5.231EU E8a_E9a0
1721724.35WDFY2'protein_coding'214AELoss-5.561AB E10_Aa0
1731734.35DHX30'protein_coding'1753AEGain5.564AB CE I15_AR40
1741744.35ARHGEF2'protein_coding'1852AELoss-6.863EU AB E32a_E33a0.00
1751754.35C3orf1'protein_coding'921AEGain4.562EU ER1j100.00
1761764.35RBM18'protein_coding'517AEGain4.815EU ES AB E5_Da100.00
1771774.35AC021593.1'protein_coding'222AELoss-6.052EU AB E11_Aa0
1781784.33PTGR1'protein_coding'1025AELoss-14.4410EU ES AB E4a_E5a62.50
1791794.33SCMH1'protein_coding'1738AELoss-5.104EU AB E21_Ab100.00
1801804.33WNK1'protein_coding'431AELoss-2.991EU E11a_E12a0
1811814.33ANGEL2'protein_coding'819AEGain5.842EU AB E5_Aa0
1821824.33CEP63'protein_coding'719AELoss-5.218EU AB E8_Aa100.00
1831834.33FAM108B1'protein_coding'27AELoss-6.771AB E3_Aa0
1841844.32KIAA1549'protein_coding'422AEGain5.581EU E2a_E3a0
1851854.32SNORD116'snoRNA'11DELoss-20.000N/ASNORD116N/A
1861864.32LDB1'protein_coding'519AELoss-6.661AB E3_Aa0
1871874.32ENTPD1'protein_coding'1338AEGain4.754EU ER11b100.00
1881884.31PNPT1'protein_coding'952AELoss-6.341AB E21_Da0
1891894.31WDR59'protein_coding'227AELoss-5.562EU E24a_E25a0.00
1901904.31AK1'protein_coding'619AELoss-5.003EU AB E4b_E4e100.00
1911914.30RP11-138D23.1'processed_transcript'15AELoss-5.371AB E2_Da0
1921924.30IQWD1'protein_coding'1546AEGain4.974AB CE E21_Da0
1931934.30EVI5'protein_coding'831AELoss-5.506EU AB E20_Aa25.00
1941944.30AC018892.5'protein_coding'883AELoss-5.5613EU AB E31a_E32a20.00
1951954.30PKD1'protein_coding'26115AELoss-6.454AB E17_Ae0
1961964.29TTC13'protein_coding'736AEGain6.523EU CE E4a_E5a0
1971974.29PLEKHM1'protein_coding'215AELoss-6.001AB E4_Da0
1981984.29KHDRBS2'protein_coding'19AELoss-8.667EU CE I6_AR7100.00
1991994.29KCTD3'protein_coding'829AELoss-5.373EU AB E18_Aa0.00
2002004.29DGCR5'processed_transcript'619AEGain6.002AB E6_De0
2012014.29RP11-236F9.2'protein_coding'311AELoss-6.461CE I6_AR30
2022024.28NT5DC3'protein_coding'626AEGain5.004EU AB E16_Dd0.00
2032034.28GOLGA3'protein_coding'326AELoss-6.083EU E18a_E19a0.00
2042044.28TMF1'protein_coding'630AEGain5.004EU ER2d33.33
2052054.28PHF21A'protein_coding'320AELoss-5.815EU ES AB CE I5_AR110.00
2062064.27DOC2A'protein_coding'111AELoss-15.673EU E6a_E7a50.00
2072074.27MIB1'protein_coding'121AELoss-5.025EU AB E13_Aa33.33
2082084.27XRN2'protein_coding'232AELoss-5.684EU AB E7_Aa0.00
2092094.27PARP8'protein_coding'227AELoss-8.615EU E2a_E3a50.00
2102104.27ZFAND5'protein_coding'1022AEGain5.662EU AB E4_Ac0
2112114.27SYT13'protein_coding'16AEGain5.151AB E3_Da0
2122124.26SF3B1'protein_coding'1351AELoss-6.074EU AB E4_Ad0
2132134.26FDXACB1'protein_coding'527AEGain6.112EU ES E15a_E17b0.00
2142144.26AC073995.1'protein_coding'7104AELoss-5.066EU AB E90_Db0.00
2152154.26SIRT2'protein_coding'2055AELoss-5.232AB E4_Ag0
2162164.26PIP4K2C'protein_coding'313AELoss-9.347EU E6b_E7a66.67
2172174.25USP39'protein_coding'2568AEGain5.893EU AB E10_Ab0
2182184.25NALCN'protein_coding'754AELoss-6.629EU ES AB E11_Da0.00
2192194.25C5orf41'protein_coding'312AELoss-6.271AB E9_Aa0
2202204.24TRPM7'protein_coding'139AELoss-6.962EU CE I1_AR20
2212214.24EGFR'protein_coding'1250AEGain5.471AB E14_Da0
2222224.24MAGI2'protein_coding'940AELoss-6.145EU AB CE E18_Db0.00
2232234.24CALCOCO1'protein_coding'622AELoss-10.492AB E16_Aa0
2242244.24KIAA0427'protein_coding'420AEGain5.224CE I12_AR50
2252254.24SFRS12'protein_coding'317AELoss-6.014EU AB E9_Da0
2262264.24DOCK11'protein_coding'358AELoss-6.442EU E6a_E7a0.00
2272274.23ASAP1'protein_coding'232AEGain6.696EU ES AB E21_Aa25.00
2282284.23GABRA2'protein_coding'212AELoss-12.984EU E5a_E6a100.00
2292294.22OFD1'protein_coding'938AELoss-5.193EU AB E3_Da0.00
2302304.22PIK3R1'protein_coding'420AELoss-14.984EU ES AB E8a_E9a100.00
2312314.22DAD1'protein_coding'37AEGain5.001CE I1_AR20
2322324.22AKAP10'protein_coding'421AEGain5.373EU ES AB E6a_E8a0.00
2332334.22ABCF3'protein_coding'1867AEGain5.344EU AB E8_Dc0.00
2342344.21CTDSPL'protein_coding'926AEGain6.885AB CE I3_AR70
2352354.21CNOT4'protein_coding'1236AELoss-5.172AB E14_Db0
2362364.21XPO5'protein_coding'1670AELoss-7.032EU E7a_E8a100.00
2372374.21ENTPD3'protein_coding'417AEGain5.525EU AB E3_Da50.00
2382384.21USP34'protein_coding'27142AELoss-5.686EU AB E76_Ab0
2392394.20HNRNPH3'protein_coding'1438AEGain7.405EU AB E5_Ab50.00
2402404.20DDX27'protein_coding'530AELoss-6.712EU E16a_E17a0.00
2412414.20AC136007.1'processed_transcript'4085AEGain5.003EU ER5g100.00
2422424.20PAN3'protein_coding'625AELoss-6.494EU AB E18_Da0.00
2432434.20PBRM1'protein_coding'2167AELoss-6.034EU E19a_E20a33.33
2442444.20WNK2'protein_coding'2063AELoss-6.652EU AB E32_Aa0
2452454.19SLC25A25'protein_coding'923AEGain5.001AB E10_Aa0
2462464.19DYM'protein_coding'319AELoss-6.123EU AB E8_Da0.00
2472474.19AC006465.1'protein_coding'820AEGain5.921CE I8_AR30
2482484.19SRR'protein_coding'18AELoss-6.451EU E1a_E2a0
2492494.18TIA1'protein_coding'2161AELoss-6.454EU ES AB E4a_E6c0.00
2502504.18DNMT1'protein_coding'241AELoss-4.952EU E1a_E2a0.00
2512514.18MAPK8'protein_coding'1645AEGain3.487EU AB ER11b33.33


Candidate Alternative Expression Genes

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
116.73AKAP9'protein_coding'2089AELoss-12.055EU AB E49a_E50a100.00
226.41BRAF'protein_coding'528AEGain12.394EU ES E4a_E5a100.00
336.23RPE'protein_coding'1838AEGain7.818EU AB CE E11_Da100.00
446.04AAGAB'protein_coding'110AELoss-29.001CE I1_AR50
556.01ITCH'protein_coding'638AELoss-7.145EU AB E26_Da50.00
665.83ZNF480'protein_coding'615AELoss-8.164EU ER2a66.67
775.82CAMSAP1'protein_coding'1342AELoss-13.314EU IR E14a_E15b50.00
885.79DYNC1I2'protein_coding'2867AELoss-8.258EU AB E19_Da100.00
995.75TRIP12'protein_coding'1776AELoss-11.8810EU ES AB E9b_E11a42.86
10105.68CTSB'protein_coding'620AEGain9.611AB E7_Da0
11115.68ABLIM3'protein_coding'327AEGain7.414EU ES ENST0000032668566.67
12125.56PCLO'protein_coding'1446AELoss-10.2714EU E1a_E2a46.15
13135.52PHACTR2'protein_coding'1128AEGain11.774EU ER16a0.00
14145.43MTSS1'protein_coding'624AELoss-7.973EU AB CE E1_Ab0
15155.41GNL3L'protein_coding'530AEGain7.755EU AB ER11b0.00
16165.36SEC22C'protein_coding'1644AEGain6.005EU AB ER13d100.00
17175.33SFRS18'protein_coding'1032AELoss-10.104EU AB E2_Db0.00
18185.33WRN'protein_coding'135AELoss-7.455EU E25a_E26a50.00
19195.30RB1CC1'protein_coding'225AELoss-8.461AB E14_Da0
20205.29UBR1'protein_coding'249AEGain10.086EU AB E30_Aa0.00
21215.28KIAA1731'protein_coding'331AELoss-7.274EU AB E29_Aa0.00
22225.27PLEKHM3'protein_coding'618AEGain9.656EU ES AB E7_Da50.00
23235.24DOPEY2'protein_coding'852AEGain5.428EU AB E35_Aa33.33
24245.21RNF213'protein_coding'244AELoss-7.0411EU AB E40_Aa28.57
25255.21AC008268.2'processed_transcript'26AELoss-7.341AB E2_Aa0
26265.19FMN2'protein_coding'836AEGain8.103AB E3_Ac0
27275.19GGA3'protein_coding'217AEGain7.614EU AB E16_Aa100.00
28285.15HHIP'protein_coding'214AELoss-5.081AB E3_Da0
29295.15RP11-534G20.1'processed_transcript'1023AELoss-6.744EU AB E7_Aa100.00
30305.15DTNBP1'protein_coding'619AELoss-9.782EU ES E8a_E10a0.00
31315.12NAT5'protein_coding'715AEGain8.482AB CE E2_Aa0
32325.12PIK3C2A'protein_coding'132AELoss-10.421EU E26a_E27a0
33335.10ASPH'protein_coding'934AEGain9.445EU ES E12a_E14a33.33
34345.07MAP4'protein_coding'2365AELoss-6.0630EU ES AB E2a_E3b62.50
35355.07RBM25'protein_coding'119AELoss-7.641AB E8_Aa0
36365.07CIC'protein_coding'120AELoss-7.322EU E7a_E8a0.00
37375.05ACAD8'protein_coding'211AEGain6.134EU AB E6_Aa0.00
38385.05EEA1'protein_coding'231AELoss-8.242EU AB E11_Aa0
39395.03ACYP2'protein_coding'515AEGain7.032EU ER7a0.00
40405.03PHF3'protein_coding'421AELoss-7.481AB E16_Da0
41415.02ARRDC4'protein_coding'18AELoss-5.211AB E3_Aa0
42425.02LUC7L2'protein_coding'824AELoss-8.516EU ES AB E5_Ab0.00
43435.01SEMA6B'protein_coding'320AELoss-6.523EU AB E16_Ac0.00
44445.01CDC42BPA'protein_coding'1557AELoss-8.785EU ES AB E34_Da50.00
45455.00UBN1'protein_coding'219AELoss-9.592EU AB E2_Ab0
46464.99SOS1'protein_coding'1041AELoss-8.273EU AB E5_Da0
47474.99PPP4C'protein_coding'19AELoss-9.631EU E7a_E8a0
48484.98TMCO3'protein_coding'1031AELoss-6.382EU AB E10_Aa0
49494.97API5'protein_coding'418AEGain7.061AB E6_Da0
50504.97HNRNPL'protein_coding'419AEGain6.392EU AB E8_Da0
51514.96PTPRD'protein_coding'1566AELoss-9.1034EU ES AB IR CE E2a_E3b48.28
52524.95OPCML'protein_coding'2046AEGain5.467EU AB CE I3_AR7100.00
53534.94FNTB'protein_coding'421AEGain8.692EU E6a_E7a100.00
54544.92PPME1'protein_coding'216AEGain7.031AB E9_Aa0
55554.92REL'protein_coding'315AELoss-7.012EU E1a_E2a0.00
56564.88RPP30'protein_coding'1333AEGain8.211AB E12_Da0
57574.88DDAH1'protein_coding'923AEGain7.001CE I3_AR30
58584.87ITGB1'protein_coding'2258AELoss-6.071AB E24_Aa0
59594.87LPHN2'protein_coding'2959AEGain6.1316EU ES AB E17a_E19b18.18
60604.85OAT'protein_coding'724AEGain4.823EU ES AB E7_Da100.00
61614.85PLCL1'protein_coding'618AELoss-5.982EU AB E1_Ab0
62624.81BTBD9'protein_coding'925AELoss-16.512EU E12a_E13a0.00
63634.81AFF3'protein_coding'1960AELoss-9.017EU AB CE E34_Db0.00
64644.79C2orf37'protein_coding'1032AELoss-8.785AB CE E16_Db0
65654.78STX16'protein_coding'2455AELoss-8.877EU ES AB E1f_E4a33.33
66664.78MED12'protein_coding'1274AELoss-6.714EU AB E5a_E6a0.00
67674.77MTMR9'protein_coding'110AEGain6.101AB E2_Da0
68684.77PGM2L1'protein_coding'114AEGain8.002EU CE I1_AR10
69694.76KIAA1217'protein_coding'1841AELoss-8.134EU AB CE E24_Aa0
70704.76NAV2'protein_coding'546AELoss-7.544EU AB E23_Aa0.00
71714.74EXOC6B'protein_coding'937AELoss-6.083EU AB E2_Da0
72724.74ZNF780A'protein_coding'615AEGain6.951AB E8_Ab0
73734.74ZCCHC6'protein_coding'1142AELoss-6.873EU E15c_E16a0.00
74744.73BAT2'protein_coding'1877AELoss-7.174EU AB E8_Aa0.00
75754.73DTX3'protein_coding'28AELoss-14.361ES E1a_E3a0
76764.73RAB11FIP3'protein_coding'1437AELoss-7.515EU AB E10_Db0
77774.70FAT3'protein_coding'534AEGain5.213EU ES AB E10_Aa0.00
78784.70MKL1'protein_coding'1338AELoss-14.263EU ES E4a_E7d50.00
79794.70ADCY6'protein_coding'324AELoss-5.952EU E4a_E5a100.00
80804.69FLNA'protein_coding'2285AELoss-7.418EU AB E12c_E13a0.00
81814.69PRMT7'protein_coding'422AEGain6.472EU AB E3_Aa0
82824.69MED1'protein_coding'219AELoss-6.951AB E18_Aa0
83834.68VPS24'protein_coding'1333AEGain6.373AB E3_Aa0
84844.68SYCP2'protein_coding'1162AEGain7.168EU AB E38_Da50.00
85854.67NDEL1'protein_coding'517AEGain6.522EU E9a_E10a100.00
86864.67NARG1L'protein_coding'1342AELoss-7.303EU AB E16_Da0
87874.66REEP5'protein_coding'411AEGain6.071AB E5_Da0
88884.66RNF220'protein_coding'2456AELoss-6.3018EU AB CE E11a_E12c33.33
89894.66CD47'protein_coding'621AEGain4.897EU ES AB E9a_E13a75.00
90904.66ANKIB1'protein_coding'733AELoss-5.992EU AB E8_Aa0
91914.66ATP11A'protein_coding'1860AELoss-5.777EU ES AB CE I3_AR1233.33
92924.65PTPDC1'protein_coding'415AELoss-7.102EU AB E11_Aa0
93934.63AC012621.2'protein_coding'420AELoss-4.736EU AB E7_Da75.00
94944.62RP11-357C3.2'processed_transcript'26AELoss-7.811EU E1a_E2a0
95954.62NARG1'protein_coding'733AEGain6.741AB E16_Ab0
96964.61NASP'protein_coding'1235AELoss-9.066EU ER2d80.00
97974.60PHIP'protein_coding'345AELoss-6.874EU AB E32_Aa0.00
98984.58DDR1'protein_coding'2556AELoss-5.775EU AB E14_De0.00
99994.58TBC1D5'protein_coding'3180AELoss-5.826EU E37a_E38a80.00
1001004.57HDAC8'protein_coding'2253AEGain5.354EU CE I15_AR2100.00
1011014.56ADH5'protein_coding'19AEGain6.241EU E2a_E3a0
1021024.56LRRC20'protein_coding'711AEGain6.651EU E3a_E4a0
1031034.56PKD2'protein_coding'115AELoss-5.562AB E11_Da0
1041044.55RIMS1'protein_coding'1544AELoss-6.732EU AB E20_Da0
1051054.55ALG13'protein_coding'2372AELoss-8.257EU AB E2_Ai100.00
1061064.54TAF2'protein_coding'126AELoss-7.662EU AB E9_Da0
1071074.54C16orf70'protein_coding'116AEGain6.316EU AB E11_Aa50.00
1081084.54PRKD1'protein_coding'734AELoss-6.882EU ES E16a_E18a0.00
1091094.54IWS1'protein_coding'1654AELoss-5.706EU AB E20_Da0
1101104.54RHOJ'protein_coding'28AELoss-6.151EU E1a_E2a0
1111114.54C5orf42'protein_coding'337AELoss-6.727EU AB I31_SR10.00
1121124.53XPC'protein_coding'831AELoss-5.911EU E9a_E10a0
1131134.53ATF7IP'protein_coding'217AELoss-7.114EU E1a_E2a33.33
1141144.53CDK2AP1'protein_coding'14AELoss-6.921EU E1a_E2a0
1151154.52ZNF318'protein_coding'211AELoss-6.401AB E7_Aa0
1161164.52CHD1'protein_coding'237AELoss-6.312EU AB E11_Aa0
1171174.52STOX2'protein_coding'25AEGain7.521AB E3_Aa0
1181184.52MRAS'protein_coding'921AEGain5.351AB E6_Aa0
1191194.51TCF12'protein_coding'527AELoss-5.776EU AB CE I5_AR200.00
1201204.51SEPT2'protein_coding'47102AELoss-6.494AB E9_Aa0
1211214.51SLIT1'protein_coding'1056AELoss-5.761EU E43b_E44a0
1221224.50STRBP'protein_coding'1042AEGain5.897AB CE E5_Aa0
1231234.50RANGAP1'protein_coding'1033AEGain7.132EU AB E6_Ad0
1241244.49SH3YL1'protein_coding'3070AELoss-13.567EU AB CE E9_Da33.33
1251254.49AC137834.1'protein_coding'392AELoss-7.712EU E84a_E85a0.00
1261264.48EFTUD1'protein_coding'220AELoss-6.331ES E5a_E7a0
1271274.48RPS14'protein_coding'38AELoss-6.821EU ER1d0
1281284.48LRBA'protein_coding'158AELoss-6.484EU AB E29_Aa0.00
1291294.47CUL1'protein_coding'327AEGain5.651AB E14_Aa0
1301304.47ANAPC5'protein_coding'321AELoss-6.841AB E3_Aa0
1311314.46PDHB'protein_coding'1034AEGain4.0110EU AB ER3g75.00
1321324.46TRIO'protein_coding'259AELoss-12.387EU AB E4_Da0.00
1331334.46NCBP1'protein_coding'530AELoss-14.337EU E12a_E13a66.67
1341344.45PEX3'protein_coding'316AEGain5.392EU AB E10_Da0
1351354.45CUGBP1'protein_coding'619AEGain5.095EU E15a_E16a75.00
1361364.45LAMA2'protein_coding'879AELoss-5.1412EU AB E58_Aa50.00
1371374.44UBA1'protein_coding'1249AELoss-7.383EU AB E20_Aa0
1381384.43COPA'protein_coding'745AEGain6.193EU AB E17_Ab0.00
1391394.43DUT'protein_coding'413AEGain6.681AB E5_Da0
1401404.43TMCO1'protein_coding'621AEGain5.951AB E9_Dc0
1411414.43PRUNE2'protein_coding'1951AELoss-5.4917EU ES AB E24a_E25a46.15
1421424.43MAPKAP1'protein_coding'2350AELoss-8.645EU ES AB E1_Ag100.00
1431434.43ZNF644'protein_coding'1331AELoss-6.422ES AB E6_Db0
1441444.42KIAA0226'protein_coding'1342AELoss-6.554EU AB E2_Aa50.00
1451454.42ACBD5'protein_coding'928AELoss-5.283EU E6a_E7a0.00
1461464.41ARMCX5'protein_coding'1341AELoss-15.7810EU ES AB E5b_E7a12.50
1471474.41WDR13'protein_coding'1441AELoss-7.053EU AB E2_Df0.00
1481484.41CYB5R4'protein_coding'321AEGain5.154EU E14a_E15a66.67
1491494.41APBA2'protein_coding'319AELoss-17.372EU E11a_E12a0.00
1501504.41PAK2'protein_coding'420AELoss-5.351AB E13_Da0
1511514.41SF4'protein_coding'216AELoss-5.871AB E6_Aa0
1521524.41C2orf84'protein_coding'1344AELoss-6.653EU ER2c0.00
1531534.40TEX10'protein_coding'424AELoss-7.242AB E3_Db0
1541544.40PEX5L'protein_coding'1953AEGain5.1415EU ES AB CE E3_Ac57.14
1551554.40KIF27'protein_coding'623AELoss-6.351AB E12_Db0
1561564.40FAM49A'protein_coding'624AEGain4.851AB E6_Aa0
1571574.39PDS5A'protein_coding'337AELoss-7.582AB E30_Da0
1581584.39SHANK2'protein_coding'2380AEGain6.425EU ES AB E55b_E56a0.00
1591594.39PLD3'protein_coding'1542AEGain6.006EU ES CE I1_AR350.00
1601604.38RAPGEF5'protein_coding'1453AELoss-6.4211EU ES AB CE E1a_E4a28.57
1611614.38CHD6'protein_coding'957AELoss-6.598EU ES AB E5_Aa0.00
1621624.38NRSN2'protein_coding'514AEGain5.451AB E1_Ad0
1631634.38MAGED2'protein_coding'1744AEGain6.634EU ES AB ER2b50.00
1641644.38CENPV'protein_coding'411AEGain5.402EU E4a_E5a0.00
1651654.38NUMA1'protein_coding'427AELoss-5.612EU AB E21_Aa0
1661664.38RUFY2'protein_coding'1340AELoss-6.625EU AB E7_Aa0
1671674.37UBAP2L'protein_coding'2369AELoss-6.186EU ES AB CE E28_Da66.67
1681684.37DAZAP1'protein_coding'313AEGain5.791AB E7_Da0
1691694.37AUP1'protein_coding'1239AELoss-7.513EU E2a_E2b0.00
1701704.37PARD3'protein_coding'1135AELoss-6.252EU E19a_E20a0.00
1711714.36SLU7'protein_coding'116AEGain5.231EU E8a_E9a0
1721724.35WDFY2'protein_coding'214AELoss-5.561AB E10_Aa0
1731734.35DHX30'protein_coding'1753AEGain5.564AB CE I15_AR40
1741744.35ARHGEF2'protein_coding'1852AELoss-6.863EU AB E32a_E33a0.00
1751754.35C3orf1'protein_coding'921AEGain4.562EU ER1j100.00
1761764.35RBM18'protein_coding'517AEGain4.815EU ES AB E5_Da100.00
1771774.35AC021593.1'protein_coding'222AELoss-6.052EU AB E11_Aa0
1781784.33PTGR1'protein_coding'1025AELoss-14.4410EU ES AB E4a_E5a62.50
1791794.33SCMH1'protein_coding'1738AELoss-5.104EU AB E21_Ab100.00
1801804.33WNK1'protein_coding'431AELoss-2.991EU E11a_E12a0
1811814.33ANGEL2'protein_coding'819AEGain5.842EU AB E5_Aa0
1821824.33CEP63'protein_coding'719AELoss-5.218EU AB E8_Aa100.00
1831834.33FAM108B1'protein_coding'27AELoss-6.771AB E3_Aa0
1841844.32KIAA1549'protein_coding'422AEGain5.581EU E2a_E3a0
1851864.32LDB1'protein_coding'519AELoss-6.661AB E3_Aa0
1861874.32ENTPD1'protein_coding'1338AEGain4.754EU ER11b100.00
1871884.31PNPT1'protein_coding'952AELoss-6.341AB E21_Da0
1881894.31WDR59'protein_coding'227AELoss-5.562EU E24a_E25a0.00
1891904.31AK1'protein_coding'619AELoss-5.003EU AB E4b_E4e100.00
1901914.30RP11-138D23.1'processed_transcript'15AELoss-5.371AB E2_Da0
1911924.30IQWD1'protein_coding'1546AEGain4.974AB CE E21_Da0
1921934.30EVI5'protein_coding'831AELoss-5.506EU AB E20_Aa25.00
1931944.30AC018892.5'protein_coding'883AELoss-5.5613EU AB E31a_E32a20.00
1941954.30PKD1'protein_coding'26115AELoss-6.454AB E17_Ae0
1951964.29TTC13'protein_coding'736AEGain6.523EU CE E4a_E5a0
1961974.29PLEKHM1'protein_coding'215AELoss-6.001AB E4_Da0
1971984.29KHDRBS2'protein_coding'19AELoss-8.667EU CE I6_AR7100.00
1981994.29KCTD3'protein_coding'829AELoss-5.373EU AB E18_Aa0.00
1992004.29DGCR5'processed_transcript'619AEGain6.002AB E6_De0
2002014.29RP11-236F9.2'protein_coding'311AELoss-6.461CE I6_AR30
2012024.28NT5DC3'protein_coding'626AEGain5.004EU AB E16_Dd0.00
2022034.28GOLGA3'protein_coding'326AELoss-6.083EU E18a_E19a0.00
2032044.28TMF1'protein_coding'630AEGain5.004EU ER2d33.33
2042054.28PHF21A'protein_coding'320AELoss-5.815EU ES AB CE I5_AR110.00
2052064.27DOC2A'protein_coding'111AELoss-15.673EU E6a_E7a50.00
2062074.27MIB1'protein_coding'121AELoss-5.025EU AB E13_Aa33.33
2072084.27XRN2'protein_coding'232AELoss-5.684EU AB E7_Aa0.00
2082094.27PARP8'protein_coding'227AELoss-8.615EU E2a_E3a50.00
2092104.27ZFAND5'protein_coding'1022AEGain5.662EU AB E4_Ac0
2102114.27SYT13'protein_coding'16AEGain5.151AB E3_Da0
2112124.26SF3B1'protein_coding'1351AELoss-6.074EU AB E4_Ad0
2122134.26FDXACB1'protein_coding'527AEGain6.112EU ES E15a_E17b0.00
2132144.26AC073995.1'protein_coding'7104AELoss-5.066EU AB E90_Db0.00
2142154.26SIRT2'protein_coding'2055AELoss-5.232AB E4_Ag0
2152164.26PIP4K2C'protein_coding'313AELoss-9.347EU E6b_E7a66.67
2162174.25USP39'protein_coding'2568AEGain5.893EU AB E10_Ab0
2172184.25NALCN'protein_coding'754AELoss-6.629EU ES AB E11_Da0.00
2182194.25C5orf41'protein_coding'312AELoss-6.271AB E9_Aa0
2192204.24TRPM7'protein_coding'139AELoss-6.962EU CE I1_AR20
2202214.24EGFR'protein_coding'1250AEGain5.471AB E14_Da0
2212224.24MAGI2'protein_coding'940AELoss-6.145EU AB CE E18_Db0.00
2222234.24CALCOCO1'protein_coding'622AELoss-10.492AB E16_Aa0
2232244.24KIAA0427'protein_coding'420AEGain5.224CE I12_AR50
2242254.24SFRS12'protein_coding'317AELoss-6.014EU AB E9_Da0
2252264.24DOCK11'protein_coding'358AELoss-6.442EU E6a_E7a0.00
2262274.23ASAP1'protein_coding'232AEGain6.696EU ES AB E21_Aa25.00
2272284.23GABRA2'protein_coding'212AELoss-12.984EU E5a_E6a100.00
2282294.22OFD1'protein_coding'938AELoss-5.193EU AB E3_Da0.00
2292304.22PIK3R1'protein_coding'420AELoss-14.984EU ES AB E8a_E9a100.00
2302314.22DAD1'protein_coding'37AEGain5.001CE I1_AR20
2312324.22AKAP10'protein_coding'421AEGain5.373EU ES AB E6a_E8a0.00
2322334.22ABCF3'protein_coding'1867AEGain5.344EU AB E8_Dc0.00
2332344.21CTDSPL'protein_coding'926AEGain6.885AB CE I3_AR70
2342354.21CNOT4'protein_coding'1236AELoss-5.172AB E14_Db0
2352364.21XPO5'protein_coding'1670AELoss-7.032EU E7a_E8a100.00
2362374.21ENTPD3'protein_coding'417AEGain5.525EU AB E3_Da50.00
2372384.21USP34'protein_coding'27142AELoss-5.686EU AB E76_Ab0
2382394.20HNRNPH3'protein_coding'1438AEGain7.405EU AB E5_Ab50.00
2392404.20DDX27'protein_coding'530AELoss-6.712EU E16a_E17a0.00
2402414.20AC136007.1'processed_transcript'4085AEGain5.003EU ER5g100.00
2412424.20PAN3'protein_coding'625AELoss-6.494EU AB E18_Da0.00
2422434.20PBRM1'protein_coding'2167AELoss-6.034EU E19a_E20a33.33
2432444.20WNK2'protein_coding'2063AELoss-6.652EU AB E32_Aa0
2442454.19SLC25A25'protein_coding'923AEGain5.001AB E10_Aa0
2452464.19DYM'protein_coding'319AELoss-6.123EU AB E8_Da0.00
2462474.19AC006465.1'protein_coding'820AEGain5.921CE I8_AR30
2472484.19SRR'protein_coding'18AELoss-6.451EU E1a_E2a0
2482494.18TIA1'protein_coding'2161AELoss-6.454EU ES AB E4a_E6c0.00
2492504.18DNMT1'protein_coding'241AELoss-4.952EU E1a_E2a0.00
2502514.18MAPK8'protein_coding'1645AEGain3.487EU AB ER11b33.33
2512524.18C2orf18'protein_coding'613AELoss-5.622EU AB E6_Dd0


Candidate Differential and Alternative Expression Genes (Gain ONLY)

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
126.41BRAF'protein_coding'528AEGain12.394EU ES E4a_E5a100.00
236.23RPE'protein_coding'1838AEGain7.818EU AB CE E11_Da100.00
3105.68CTSB'protein_coding'620AEGain9.611AB E7_Da0
4115.68ABLIM3'protein_coding'327AEGain7.414EU ES ENST0000032668566.67
5135.52PHACTR2'protein_coding'1128AEGain11.774EU ER16a0.00
6155.41GNL3L'protein_coding'530AEGain7.755EU AB ER11b0.00
7165.36SEC22C'protein_coding'1644AEGain6.005EU AB ER13d100.00
8205.29UBR1'protein_coding'249AEGain10.086EU AB E30_Aa0.00
9225.27PLEKHM3'protein_coding'618AEGain9.656EU ES AB E7_Da50.00
10235.24DOPEY2'protein_coding'852AEGain5.428EU AB E35_Aa33.33
11265.19FMN2'protein_coding'836AEGain8.103AB E3_Ac0
12275.19GGA3'protein_coding'217AEGain7.614EU AB E16_Aa100.00
13315.12NAT5'protein_coding'715AEGain8.482AB CE E2_Aa0
14335.10ASPH'protein_coding'934AEGain9.445EU ES E12a_E14a33.33
15375.05ACAD8'protein_coding'211AEGain6.134EU AB E6_Aa0.00
16395.03ACYP2'protein_coding'515AEGain7.032EU ER7a0.00
17494.97API5'protein_coding'418AEGain7.061AB E6_Da0
18504.97HNRNPL'protein_coding'419AEGain6.392EU AB E8_Da0
19524.95OPCML'protein_coding'2046AEGain5.467EU AB CE I3_AR7100.00
20534.94FNTB'protein_coding'421AEGain8.692EU E6a_E7a100.00
21544.92PPME1'protein_coding'216AEGain7.031AB E9_Aa0
22564.88RPP30'protein_coding'1333AEGain8.211AB E12_Da0
23574.88DDAH1'protein_coding'923AEGain7.001CE I3_AR30
24594.87LPHN2'protein_coding'2959AEGain6.1316EU ES AB E17a_E19b18.18
25604.85OAT'protein_coding'724AEGain4.823EU ES AB E7_Da100.00
26674.77MTMR9'protein_coding'110AEGain6.101AB E2_Da0
27684.77PGM2L1'protein_coding'114AEGain8.002EU CE I1_AR10
28724.74ZNF780A'protein_coding'615AEGain6.951AB E8_Ab0
29774.70FAT3'protein_coding'534AEGain5.213EU ES AB E10_Aa0.00
30814.69PRMT7'protein_coding'422AEGain6.472EU AB E3_Aa0
31834.68VPS24'protein_coding'1333AEGain6.373AB E3_Aa0
32844.68SYCP2'protein_coding'1162AEGain7.168EU AB E38_Da50.00
33854.67NDEL1'protein_coding'517AEGain6.522EU E9a_E10a100.00
34874.66REEP5'protein_coding'411AEGain6.071AB E5_Da0
35894.66CD47'protein_coding'621AEGain4.897EU ES AB E9a_E13a75.00
36954.62NARG1'protein_coding'733AEGain6.741AB E16_Ab0
371004.57HDAC8'protein_coding'2253AEGain5.354EU CE I15_AR2100.00
381014.56ADH5'protein_coding'19AEGain6.241EU E2a_E3a0
391024.56LRRC20'protein_coding'711AEGain6.651EU E3a_E4a0
401074.54C16orf70'protein_coding'116AEGain6.316EU AB E11_Aa50.00
411174.52STOX2'protein_coding'25AEGain7.521AB E3_Aa0
421184.52MRAS'protein_coding'921AEGain5.351AB E6_Aa0
431224.50STRBP'protein_coding'1042AEGain5.897AB CE E5_Aa0
441234.50RANGAP1'protein_coding'1033AEGain7.132EU AB E6_Ad0
451294.47CUL1'protein_coding'327AEGain5.651AB E14_Aa0
461314.46PDHB'protein_coding'1034AEGain4.0110EU AB ER3g75.00
471344.45PEX3'protein_coding'316AEGain5.392EU AB E10_Da0
481354.45CUGBP1'protein_coding'619AEGain5.095EU E15a_E16a75.00
491384.43COPA'protein_coding'745AEGain6.193EU AB E17_Ab0.00
501394.43DUT'protein_coding'413AEGain6.681AB E5_Da0
511404.43TMCO1'protein_coding'621AEGain5.951AB E9_Dc0
521484.41CYB5R4'protein_coding'321AEGain5.154EU E14a_E15a66.67
531544.40PEX5L'protein_coding'1953AEGain5.1415EU ES AB CE E3_Ac57.14
541564.40FAM49A'protein_coding'624AEGain4.851AB E6_Aa0
551584.39SHANK2'protein_coding'2380AEGain6.425EU ES AB E55b_E56a0.00
561594.39PLD3'protein_coding'1542AEGain6.006EU ES CE I1_AR350.00
571624.38NRSN2'protein_coding'514AEGain5.451AB E1_Ad0
581634.38MAGED2'protein_coding'1744AEGain6.634EU ES AB ER2b50.00
591644.38CENPV'protein_coding'411AEGain5.402EU E4a_E5a0.00
601684.37DAZAP1'protein_coding'313AEGain5.791AB E7_Da0
611714.36SLU7'protein_coding'116AEGain5.231EU E8a_E9a0
621734.35DHX30'protein_coding'1753AEGain5.564AB CE I15_AR40
631754.35C3orf1'protein_coding'921AEGain4.562EU ER1j100.00
641764.35RBM18'protein_coding'517AEGain4.815EU ES AB E5_Da100.00
651814.33ANGEL2'protein_coding'819AEGain5.842EU AB E5_Aa0
661844.32KIAA1549'protein_coding'422AEGain5.581EU E2a_E3a0
671874.32ENTPD1'protein_coding'1338AEGain4.754EU ER11b100.00
681924.30IQWD1'protein_coding'1546AEGain4.974AB CE E21_Da0
691964.29TTC13'protein_coding'736AEGain6.523EU CE E4a_E5a0
702004.29DGCR5'processed_transcript'619AEGain6.002AB E6_De0
712024.28NT5DC3'protein_coding'626AEGain5.004EU AB E16_Dd0.00
722044.28TMF1'protein_coding'630AEGain5.004EU ER2d33.33
732104.27ZFAND5'protein_coding'1022AEGain5.662EU AB E4_Ac0
742114.27SYT13'protein_coding'16AEGain5.151AB E3_Da0
752134.26FDXACB1'protein_coding'527AEGain6.112EU ES E15a_E17b0.00
762174.25USP39'protein_coding'2568AEGain5.893EU AB E10_Ab0
772214.24EGFR'protein_coding'1250AEGain5.471AB E14_Da0
782244.24KIAA0427'protein_coding'420AEGain5.224CE I12_AR50
792274.23ASAP1'protein_coding'232AEGain6.696EU ES AB E21_Aa25.00
802314.22DAD1'protein_coding'37AEGain5.001CE I1_AR20
812324.22AKAP10'protein_coding'421AEGain5.373EU ES AB E6a_E8a0.00
822334.22ABCF3'protein_coding'1867AEGain5.344EU AB E8_Dc0.00
832344.21CTDSPL'protein_coding'926AEGain6.885AB CE I3_AR70
842374.21ENTPD3'protein_coding'417AEGain5.525EU AB E3_Da50.00
852394.20HNRNPH3'protein_coding'1438AEGain7.405EU AB E5_Ab50.00
862414.20AC136007.1'processed_transcript'4085AEGain5.003EU ER5g100.00
872454.19SLC25A25'protein_coding'923AEGain5.001AB E10_Aa0
882474.19AC006465.1'protein_coding'820AEGain5.921CE I8_AR30
892514.18MAPK8'protein_coding'1645AEGain3.487EU AB ER11b33.33
902534.17FAM73A'protein_coding'422AEGain6.662EU AB E10_Ab0
912554.17TTC9C'protein_coding'26AEGain4.911AB E1_Ac0
922574.16ANKRD32'protein_coding'938AEGain6.095EU AB E24_Aa0.00
932584.16TFRC'protein_coding'1546AEGain6.612EU AB E9a_E10a0
942614.16MAP2K1'protein_coding'213AEGain4.992CE I6_AR40
952644.15CADPS'protein_coding'1962AEGain5.057EU ES AB CE I35_AR170.00
962654.15MTMR1'protein_coding'1641AEGain5.325EU ES AB E2a_E6a0.00
972674.15PHLPP2'protein_coding'522AEGain4.872EU AB E11_Da0
982694.14SNX17'protein_coding'934AEGain4.825EU AB E3_Ab50.00
992714.14GTF3C2'protein_coding'1550AEGain5.741AB E20_Da0
1002724.14C5orf13'protein_coding'1018AEGain4.551AB E7_Da0
1012744.14FBXO22'protein_coding'28AEGain4.681EU E2a_E3a0
1022754.14FUS'protein_coding'1236AEGain5.612AB E7_Da0
1032764.14SLC8A3'protein_coding'812AEGain5.261AB E3_Da0
1042804.13LIPA'protein_coding'1133AEGain10.663EU E6a_E7a100.00
1052814.13EXT2'protein_coding'318AEGain5.322EU AB E16_Aa0
1062844.13YIPF4'protein_coding'412AEGain5.823EU AB E6_Db100.00
1072854.13ACBD6'protein_coding'314AEGain6.521CE I10_AR40
1082864.13KAT5'protein_coding'315AEGain6.192EU E1b_E2a0.00
1092894.11TRAP1'protein_coding'118AEGain4.821AB E7_Aa0
1102904.11DNAJB6'protein_coding'2257AEGain4.762AB E10_Da0
1112934.11PSMC6'protein_coding'317AEGain4.822EU AB E6_Aa0
1122954.11MECR'protein_coding'2156AEGain6.534EU AB E12_Da50.00
1132964.11RBM3'protein_coding'1433AEGain4.924EU AB E2_Ag0.00
1143004.10EFNB2'protein_coding'27AEGain5.351AB E2_Da0
1153034.10KIAA0513'protein_coding'113AEGain5.923EU ES E9a_E11a50.00
1163064.09DENND3'protein_coding'528AEGain5.343EU AB E19a_E20a0.00
1173084.09TRMT11'protein_coding'1439AEGain5.905EU ES AB E11_Aa0.00
1183134.09MRS2'protein_coding'725AEGain4.651AB E10_Aa0
1193144.09DNM3'protein_coding'833AEGain5.788EU ES AB IR E19a_E22a66.67
1203164.09RCOR3'protein_coding'925AEGain5.646EU ES AB E7_Da50.00
1213264.07RIOK1'protein_coding'526AEGain5.942EU E7a_E7b0.00
1223284.07VAPA'protein_coding'28AEGain4.502AB E7_Aa0
1233314.06AC183087.2'protein_coding'217AEGain4.851AB E4_Aa0
1243334.06PPA1'protein_coding'417AEGain4.691AB E10_Da0
1253344.06MAST4'protein_coding'3081AEGain4.6516EU AB CE E27_Aa0.00
1263394.05FAM185A'protein_coding'926AEGain4.632AB E8_Da0
1273474.04TRIM27'protein_coding'923AEGain5.121AB E7_Db0
1283484.04EPB41L3'protein_coding'428AEGain4.496EU ES E15a_E17a60.00
1293494.03SLC8A2'protein_coding'211AEGain4.521AB E9_Db0
1303514.03CDH2'protein_coding'524AEGain5.152AB E15_Aa0
1313534.03QRICH1'protein_coding'1438AEGain6.023AB E12_Da0
1323544.03RABGEF1'protein_coding'1028AEGain6.002EU I4_SR80
1333554.02RP11-280F2.1'processed_transcript'416AEGain4.943EU AB E6_Da0.00
1343564.02IDS'protein_coding'823AEGain5.242EU E3a_E4a0.00
1353574.02HSP90AA1'protein_coding'418AEGain5.821ES E2a_E4a0
1363584.02RUNDC3B'protein_coding'928AEGain4.731AB E6_Aa0
1373614.01THUMPD3'protein_coding'1028AEGain5.901AB E9_Aa0
1383624.00MYO5A'protein_coding'851AEGain4.892EU E30a_E31a0.00
1393644.00SLC7A14'protein_coding'210AEGain5.195EU ES AB E9_Aa33.33
1403654.00FBXL2'protein_coding'2164AEGain4.367EU AB E21_Ab75.00
1413693.99C10orf46'protein_coding'925AEGain5.353EU AB E5_Da0.00
1423743.99INCENP'protein_coding'219AEGain5.082EU ER11a0.00
1433763.98SPATS2L'protein_coding'2760AEGain4.5510EU ES AB CE E11_Da0.00
1443773.98R3HDM1'protein_coding'2367AEGain4.8119EU ES AB IR CE E6b_E8a50.00
1453803.98ADHFE1'protein_coding'1945AEGain6.236EU AB E10_Db50.00
1463813.98ELL2'protein_coding'215AEGain5.723CE I4_AR30
1473833.98GSTO1'protein_coding'615AEGain5.504EU AB E3_Aa100.00
1483893.96AC005277.1'protein_coding'323AEGain5.003EU AB E15_Da0.00
1493953.95HMGCS1'protein_coding'211AEGain4.661AB E3_Aa0
1503963.94CTDSPL2'protein_coding'215AEGain5.651AB E6_Da0
1513973.94RAB8B'protein_coding'211AEGain5.764EU AB E2_Aa0.00
1523983.94UBE2Q1'protein_coding'726AEGain4.991EU E2a_E3a0
1534003.93FAM133B'protein_coding'1133AEGain4.861EU ER5b0
1544043.93SMURF1'protein_coding'834AEGain4.708EU AB CE I15_AR4100.00
1554073.93MYOM2'protein_coding'137AEGain4.764EU E28a_E29a33.33
1564083.93MOSC2'protein_coding'720AEGain4.272AB I7_SR50
1574103.92EIF2A'protein_coding'1750AEGain4.522EU AB E14_Da0
1584113.92NHLRC3'protein_coding'615AEGain4.602AB E1_Da0
1594163.91NFIB'protein_coding'1031AEGain5.795EU ES AB E14a_E17a33.33
1604213.90TBL1XR1'protein_coding'1748AEGain5.166EU AB CE E21_Da0
1614243.90TCF7L2'protein_coding'1644AEGain5.512CE I5_AR60
1624263.90ATP13A4'protein_coding'1155AEGain5.314EU AB E22_Aa50.00
1634273.89PPFIA3'protein_coding'330AEGain5.242EU E22a_E23a0.00
1644283.89CUL2'protein_coding'930AEGain5.261AB E4_Da0
1654293.89ANKRD16'protein_coding'622AEGain4.813EU AB E3_Da0.00
1664303.89MDM1'protein_coding'418AEGain4.992EU ER14a0.00
1674313.89TBC1D9'protein_coding'223AEGain4.685EU AB E21_Ab0.00
1684333.89VOPP1'protein_coding'1638AEGain4.671I17_SR50
1694403.87TMEM214'protein_coding'1447AEGain5.012EU ER13k100.00
1704413.87SUPT5H'protein_coding'637AEGain5.151EU ER5a0
1714423.86AHSA1'protein_coding'19AEGain4.681AB E9_Aa0
1724443.86TSC22D1'protein_coding'1227AEGain5.274AB E9_Ab0
1734463.86MAPKSP1'protein_coding'17AEGain4.812EU AB E7_Aa0
1744513.85PTPRB'protein_coding'338AEGain16.857EU E6a_E7a0.00
1754543.85ILK'protein_coding'317AEGain5.354EU IR I60.00
1764583.84SLC7A8'protein_coding'1023AEGain4.614EU AB ER14b50.00
1774613.84UXS1'protein_coding'1640AEGain5.001EU ER17c0
1784623.84C7orf44'protein_coding'2047AEGain4.631AB E8_Dg0
1794643.84PCNA'protein_coding'28AEGain5.232EU E5a_E6a0.00
1804663.83RPA1'protein_coding'117AEGain4.354EU AB E2_Aa0.00
1814673.83PLEKHG5'protein_coding'1239AEGain5.346EU AB E12a_E13a50.00
1824683.83PTCD3'protein_coding'2373AEGain4.614EU AB E14_Da0
1834703.82CCDC25'protein_coding'211AEGain5.021ES E5a_E7a0
1844723.82SLC38A11'protein_coding'1032AEGain4.893EU AB E10_Aa0
1854753.82AMFR'protein_coding'324AEGain5.323EU AB E9_Aa0
1864763.82SPATA6'protein_coding'1033AEGain7.808EU ES AB ER3b80.00
1874773.82NECAB3'protein_coding'1750AEGain4.822EU AB E15_Ab0
1884813.82CTA-217C2.1'processed_transcript'25AEGain5.081AB E2_Da0
1894853.81UBXN2B'protein_coding'18AEGain4.121ES E2a_E4a0
1904873.81MORN4'protein_coding'613AEGain4.692EU AB E4_Da0
1914943.80RRAGD'protein_coding'312AEGain5.521ES E6b_E8a0
1924953.80RASA1'protein_coding'327AEGain4.514EU ES AB CE E20_Aa100.00
1934963.80RPS6KC1'protein_coding'518AEGain4.652EU AB E4_Aa0
1944993.80DNAH6'protein_coding'989AEGain4.536EU E35a_E36a0.00
1955033.80ARMC10'protein_coding'1024AEGain5.474EU AB E10_Aa0.00
1965043.79CTSF'protein_coding'113AEGain4.782EU E12a_E13a0.00
1975053.79LMBR1'protein_coding'2160AEGain4.588EU AB E22_Dd33.33
1985063.79DENND2A'protein_coding'1037AEGain14.374EU AB E7a_E8a0.00
1995133.78PBX2'protein_coding'517AEGain4.972EU AB E4_Da0
2005143.78ACADVL'protein_coding'322AEGain5.532EU AB E15_Aa0
2015153.78B3GNT5'protein_coding'1226AEGain4.552EU AB E4_Aa0
2025213.77ULK1'protein_coding'128AEGain5.401EU E17a_E18a0
2035223.77WWC1'protein_coding'226AEGain4.661AB E20_Aa0
2045233.77RP11-803B1.3'pseudogene'13AEGain4.981AB E1_Da0
2055273.76TM9SF3'protein_coding'626AEGain4.771AB E7_Aa0
2065313.76NAA40'protein_coding'39AEGain4.811EU ER3a0
2075343.76OCIAD1'protein_coding'514AEGain4.581AB E7_Db0
2085363.75KIRREL3'protein_coding'217AEGain4.562EU AB E15_Aa0
2095373.75GCA'protein_coding'1231AEGain4.684EU AB E2_Aa0
2105383.75FBXO31'protein_coding'211AEGain4.612EU CE I5_AR10
2115403.75ZNF263'protein_coding'16AEGain4.711AB E3_Da0
2125413.75ZFYVE9'protein_coding'524AEGain4.632EU AB E15_Db0
2135433.75JMY'protein_coding'417AEGain5.321AB E9_Db0
2145453.75SLIT3'protein_coding'442AEGain4.613EU AB CE E26a_E27a0
2155503.74STIM2'protein_coding'1234AEGain4.551AB E8_Da0
2165533.74PGAP1'protein_coding'1351AEGain4.562EU AB E28_Da0
2175543.74DCUN1D4'protein_coding'518AEGain4.891AB E5_Da0
2185553.74PKIG'protein_coding'916AEGain5.001AB E5_Da0
2195563.73LRRC37B'protein_coding'314AEGain5.052AB E6_Aa0
2205573.73RIC8B'protein_coding'1028AEGain4.653ES AB E15_Da0.00
2215583.73RBM39'protein_coding'47104AEGain5.3912EU ES AB E3a_E3j42.86
2225633.73PPP2R2B'protein_coding'820AEGain5.202ES AB E9_Da0
2235643.73XPO1'protein_coding'3188AEGain5.294EU ES E5a_E7c0.00
2245693.72VWA5B2'protein_coding'932AEGain4.665EU AB E15_Ac33.33
2255703.72LIN52'protein_coding'16AEGain4.711CE I5_AR30
2265723.72ABCA6'protein_coding'340AEGain5.633EU AB E26a_E27a100.00
2275733.72SRRT'protein_coding'2059AEGain7.004EU ER6c33.33
2285783.71TOR1B'protein_coding'616AEGain4.631EU E1a_E2a0
2295843.71ST6GALNAC5'protein_coding'614AEGain3.536EU AB E7_Aa0.00
2305863.71WDR41'protein_coding'214AEGain4.933EU AB E11_Aa0.00
2315873.71HERC4'protein_coding'1244AEGain5.373ES AB CE E18a_E20a0
2325893.71SLC7A11'protein_coding'112AEGain5.021AB E8_Aa0
2335913.70SARNP'protein_coding'214AEGain4.011CE I9_AR80
2345923.70ERGIC2'protein_coding'217AEGain4.801AB E2_Da0
2355933.70EFEMP1'protein_coding'1538AEGain4.792EU AB E2_Ae0
2365943.70ERI3'protein_coding'1229AEGain5.063EU AB E13_Da0.00
2375993.69SNAP91'protein_coding'840AEGain4.611ES E10a_E12a0
2386003.69ARIH2'protein_coding'3576AEGain4.074EU AB E4a_E5b50.00
2396013.69C1orf61'protein_coding'2757AEGain4.914AB E10_Ae0
2406023.69C22orf32'protein_coding'49AEGain4.692EU AB E3_Aa0
2416033.69ENTPD4'protein_coding'317AEGain4.826EU AB CE I10_AR250.00
2426043.69USP28'protein_coding'225AEGain4.242EU AB E7_Da0
2436053.69PAPD5'protein_coding'316AEGain4.551CE I2_AR30
2446063.69ZNF133'protein_coding'1021AEGain4.951EU E4a_E5b0
2456103.68GDPD1'protein_coding'212AEGain4.851EU E9b_E10a0
2466113.68RAB30'protein_coding'27AEGain5.381CE I2_AR20
2476143.68CSMD3'protein_coding'1287AEGain5.065EU AB E70_Aa0.00
2486153.67SORBS1'protein_coding'2460AEGain4.948EU ES AB E18a_E22a0.00
2496163.67DPF3'protein_coding'315AEGain5.231EU E10a_E11a0
2506203.67MARK2'protein_coding'1028AEGain5.004EU CE I1_AR20.00
2516213.67MCF2L'protein_coding'38107AEGain4.749EU ES AB E14_Da0.00


Candidate Differential and Alternative Expression Genes (Loss ONLY)

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
116.73AKAP9'protein_coding'2089AELoss-12.055EU AB E49a_E50a100.00
246.04AAGAB'protein_coding'110AELoss-29.001CE I1_AR50
356.01ITCH'protein_coding'638AELoss-7.145EU AB E26_Da50.00
465.83ZNF480'protein_coding'615AELoss-8.164EU ER2a66.67
575.82CAMSAP1'protein_coding'1342AELoss-13.314EU IR E14a_E15b50.00
685.79DYNC1I2'protein_coding'2867AELoss-8.258EU AB E19_Da100.00
795.75TRIP12'protein_coding'1776AELoss-11.8810EU ES AB E9b_E11a42.86
8125.56PCLO'protein_coding'1446AELoss-10.2714EU E1a_E2a46.15
9145.43MTSS1'protein_coding'624AELoss-7.973EU AB CE E1_Ab0
10175.33SFRS18'protein_coding'1032AELoss-10.104EU AB E2_Db0.00
11185.33WRN'protein_coding'135AELoss-7.455EU E25a_E26a50.00
12195.30RB1CC1'protein_coding'225AELoss-8.461AB E14_Da0
13215.28KIAA1731'protein_coding'331AELoss-7.274EU AB E29_Aa0.00
14245.21RNF213'protein_coding'244AELoss-7.0411EU AB E40_Aa28.57
15255.21AC008268.2'processed_transcript'26AELoss-7.341AB E2_Aa0
16285.15HHIP'protein_coding'214AELoss-5.081AB E3_Da0
17295.15RP11-534G20.1'processed_transcript'1023AELoss-6.744EU AB E7_Aa100.00
18305.15DTNBP1'protein_coding'619AELoss-9.782EU ES E8a_E10a0.00
19325.12PIK3C2A'protein_coding'132AELoss-10.421EU E26a_E27a0
20345.07MAP4'protein_coding'2365AELoss-6.0630EU ES AB E2a_E3b62.50
21355.07RBM25'protein_coding'119AELoss-7.641AB E8_Aa0
22365.07CIC'protein_coding'120AELoss-7.322EU E7a_E8a0.00
23385.05EEA1'protein_coding'231AELoss-8.242EU AB E11_Aa0
24405.03PHF3'protein_coding'421AELoss-7.481AB E16_Da0
25415.02ARRDC4'protein_coding'18AELoss-5.211AB E3_Aa0
26425.02LUC7L2'protein_coding'824AELoss-8.516EU ES AB E5_Ab0.00
27435.01SEMA6B'protein_coding'320AELoss-6.523EU AB E16_Ac0.00
28445.01CDC42BPA'protein_coding'1557AELoss-8.785EU ES AB E34_Da50.00
29455.00UBN1'protein_coding'219AELoss-9.592EU AB E2_Ab0
30464.99SOS1'protein_coding'1041AELoss-8.273EU AB E5_Da0
31474.99PPP4C'protein_coding'19AELoss-9.631EU E7a_E8a0
32484.98TMCO3'protein_coding'1031AELoss-6.382EU AB E10_Aa0
33514.96PTPRD'protein_coding'1566AELoss-9.1034EU ES AB IR CE E2a_E3b48.28
34554.92REL'protein_coding'315AELoss-7.012EU E1a_E2a0.00
35584.87ITGB1'protein_coding'2258AELoss-6.071AB E24_Aa0
36614.85PLCL1'protein_coding'618AELoss-5.982EU AB E1_Ab0
37624.81BTBD9'protein_coding'925AELoss-16.512EU E12a_E13a0.00
38634.81AFF3'protein_coding'1960AELoss-9.017EU AB CE E34_Db0.00
39644.79C2orf37'protein_coding'1032AELoss-8.785AB CE E16_Db0
40654.78STX16'protein_coding'2455AELoss-8.877EU ES AB E1f_E4a33.33
41664.78MED12'protein_coding'1274AELoss-6.714EU AB E5a_E6a0.00
42694.76KIAA1217'protein_coding'1841AELoss-8.134EU AB CE E24_Aa0
43704.76NAV2'protein_coding'546AELoss-7.544EU AB E23_Aa0.00
44714.74EXOC6B'protein_coding'937AELoss-6.083EU AB E2_Da0
45734.74ZCCHC6'protein_coding'1142AELoss-6.873EU E15c_E16a0.00
46744.73BAT2'protein_coding'1877AELoss-7.174EU AB E8_Aa0.00
47754.73DTX3'protein_coding'28AELoss-14.361ES E1a_E3a0
48764.73RAB11FIP3'protein_coding'1437AELoss-7.515EU AB E10_Db0
49784.70MKL1'protein_coding'1338AELoss-14.263EU ES E4a_E7d50.00
50794.70ADCY6'protein_coding'324AELoss-5.952EU E4a_E5a100.00
51804.69FLNA'protein_coding'2285AELoss-7.418EU AB E12c_E13a0.00
52824.69MED1'protein_coding'219AELoss-6.951AB E18_Aa0
53864.67NARG1L'protein_coding'1342AELoss-7.303EU AB E16_Da0
54884.66RNF220'protein_coding'2456AELoss-6.3018EU AB CE E11a_E12c33.33
55904.66ANKIB1'protein_coding'733AELoss-5.992EU AB E8_Aa0
56914.66ATP11A'protein_coding'1860AELoss-5.777EU ES AB CE I3_AR1233.33
57924.65PTPDC1'protein_coding'415AELoss-7.102EU AB E11_Aa0
58934.63AC012621.2'protein_coding'420AELoss-4.736EU AB E7_Da75.00
59944.62RP11-357C3.2'processed_transcript'26AELoss-7.811EU E1a_E2a0
60964.61NASP'protein_coding'1235AELoss-9.066EU ER2d80.00
61974.60PHIP'protein_coding'345AELoss-6.874EU AB E32_Aa0.00
62984.58DDR1'protein_coding'2556AELoss-5.775EU AB E14_De0.00
63994.58TBC1D5'protein_coding'3180AELoss-5.826EU E37a_E38a80.00
641034.56PKD2'protein_coding'115AELoss-5.562AB E11_Da0
651044.55RIMS1'protein_coding'1544AELoss-6.732EU AB E20_Da0
661054.55ALG13'protein_coding'2372AELoss-8.257EU AB E2_Ai100.00
671064.54TAF2'protein_coding'126AELoss-7.662EU AB E9_Da0
681084.54PRKD1'protein_coding'734AELoss-6.882EU ES E16a_E18a0.00
691094.54IWS1'protein_coding'1654AELoss-5.706EU AB E20_Da0
701104.54RHOJ'protein_coding'28AELoss-6.151EU E1a_E2a0
711114.54C5orf42'protein_coding'337AELoss-6.727EU AB I31_SR10.00
721124.53XPC'protein_coding'831AELoss-5.911EU E9a_E10a0
731134.53ATF7IP'protein_coding'217AELoss-7.114EU E1a_E2a33.33
741144.53CDK2AP1'protein_coding'14AELoss-6.921EU E1a_E2a0
751154.52ZNF318'protein_coding'211AELoss-6.401AB E7_Aa0
761164.52CHD1'protein_coding'237AELoss-6.312EU AB E11_Aa0
771194.51TCF12'protein_coding'527AELoss-5.776EU AB CE I5_AR200.00
781204.51SEPT2'protein_coding'47102AELoss-6.494AB E9_Aa0
791214.51SLIT1'protein_coding'1056AELoss-5.761EU E43b_E44a0
801244.49SH3YL1'protein_coding'3070AELoss-13.567EU AB CE E9_Da33.33
811254.49AC137834.1'protein_coding'392AELoss-7.712EU E84a_E85a0.00
821264.48EFTUD1'protein_coding'220AELoss-6.331ES E5a_E7a0
831274.48RPS14'protein_coding'38AELoss-6.821EU ER1d0
841284.48LRBA'protein_coding'158AELoss-6.484EU AB E29_Aa0.00
851304.47ANAPC5'protein_coding'321AELoss-6.841AB E3_Aa0
861324.46TRIO'protein_coding'259AELoss-12.387EU AB E4_Da0.00
871334.46NCBP1'protein_coding'530AELoss-14.337EU E12a_E13a66.67
881364.45LAMA2'protein_coding'879AELoss-5.1412EU AB E58_Aa50.00
891374.44UBA1'protein_coding'1249AELoss-7.383EU AB E20_Aa0
901414.43PRUNE2'protein_coding'1951AELoss-5.4917EU ES AB E24a_E25a46.15
911424.43MAPKAP1'protein_coding'2350AELoss-8.645EU ES AB E1_Ag100.00
921434.43ZNF644'protein_coding'1331AELoss-6.422ES AB E6_Db0
931444.42KIAA0226'protein_coding'1342AELoss-6.554EU AB E2_Aa50.00
941454.42ACBD5'protein_coding'928AELoss-5.283EU E6a_E7a0.00
951464.41ARMCX5'protein_coding'1341AELoss-15.7810EU ES AB E5b_E7a12.50
961474.41WDR13'protein_coding'1441AELoss-7.053EU AB E2_Df0.00
971494.41APBA2'protein_coding'319AELoss-17.372EU E11a_E12a0.00
981504.41PAK2'protein_coding'420AELoss-5.351AB E13_Da0
991514.41SF4'protein_coding'216AELoss-5.871AB E6_Aa0
1001524.41C2orf84'protein_coding'1344AELoss-6.653EU ER2c0.00
1011534.40TEX10'protein_coding'424AELoss-7.242AB E3_Db0
1021554.40KIF27'protein_coding'623AELoss-6.351AB E12_Db0
1031574.39PDS5A'protein_coding'337AELoss-7.582AB E30_Da0
1041604.38RAPGEF5'protein_coding'1453AELoss-6.4211EU ES AB CE E1a_E4a28.57
1051614.38CHD6'protein_coding'957AELoss-6.598EU ES AB E5_Aa0.00
1061654.38NUMA1'protein_coding'427AELoss-5.612EU AB E21_Aa0
1071664.38RUFY2'protein_coding'1340AELoss-6.625EU AB E7_Aa0
1081674.37UBAP2L'protein_coding'2369AELoss-6.186EU ES AB CE E28_Da66.67
1091694.37AUP1'protein_coding'1239AELoss-7.513EU E2a_E2b0.00
1101704.37PARD3'protein_coding'1135AELoss-6.252EU E19a_E20a0.00
1111724.35WDFY2'protein_coding'214AELoss-5.561AB E10_Aa0
1121744.35ARHGEF2'protein_coding'1852AELoss-6.863EU AB E32a_E33a0.00
1131774.35AC021593.1'protein_coding'222AELoss-6.052EU AB E11_Aa0
1141784.33PTGR1'protein_coding'1025AELoss-14.4410EU ES AB E4a_E5a62.50
1151794.33SCMH1'protein_coding'1738AELoss-5.104EU AB E21_Ab100.00
1161804.33WNK1'protein_coding'431AELoss-2.991EU E11a_E12a0
1171824.33CEP63'protein_coding'719AELoss-5.218EU AB E8_Aa100.00
1181834.33FAM108B1'protein_coding'27AELoss-6.771AB E3_Aa0
1191854.32SNORD116'snoRNA'11DELoss-20.000N/ASNORD116N/A
1201864.32LDB1'protein_coding'519AELoss-6.661AB E3_Aa0
1211884.31PNPT1'protein_coding'952AELoss-6.341AB E21_Da0
1221894.31WDR59'protein_coding'227AELoss-5.562EU E24a_E25a0.00
1231904.31AK1'protein_coding'619AELoss-5.003EU AB E4b_E4e100.00
1241914.30RP11-138D23.1'processed_transcript'15AELoss-5.371AB E2_Da0
1251934.30EVI5'protein_coding'831AELoss-5.506EU AB E20_Aa25.00
1261944.30AC018892.5'protein_coding'883AELoss-5.5613EU AB E31a_E32a20.00
1271954.30PKD1'protein_coding'26115AELoss-6.454AB E17_Ae0
1281974.29PLEKHM1'protein_coding'215AELoss-6.001AB E4_Da0
1291984.29KHDRBS2'protein_coding'19AELoss-8.667EU CE I6_AR7100.00
1301994.29KCTD3'protein_coding'829AELoss-5.373EU AB E18_Aa0.00
1312014.29RP11-236F9.2'protein_coding'311AELoss-6.461CE I6_AR30
1322034.28GOLGA3'protein_coding'326AELoss-6.083EU E18a_E19a0.00
1332054.28PHF21A'protein_coding'320AELoss-5.815EU ES AB CE I5_AR110.00
1342064.27DOC2A'protein_coding'111AELoss-15.673EU E6a_E7a50.00
1352074.27MIB1'protein_coding'121AELoss-5.025EU AB E13_Aa33.33
1362084.27XRN2'protein_coding'232AELoss-5.684EU AB E7_Aa0.00
1372094.27PARP8'protein_coding'227AELoss-8.615EU E2a_E3a50.00
1382124.26SF3B1'protein_coding'1351AELoss-6.074EU AB E4_Ad0
1392144.26AC073995.1'protein_coding'7104AELoss-5.066EU AB E90_Db0.00
1402154.26SIRT2'protein_coding'2055AELoss-5.232AB E4_Ag0
1412164.26PIP4K2C'protein_coding'313AELoss-9.347EU E6b_E7a66.67
1422184.25NALCN'protein_coding'754AELoss-6.629EU ES AB E11_Da0.00
1432194.25C5orf41'protein_coding'312AELoss-6.271AB E9_Aa0
1442204.24TRPM7'protein_coding'139AELoss-6.962EU CE I1_AR20
1452224.24MAGI2'protein_coding'940AELoss-6.145EU AB CE E18_Db0.00
1462234.24CALCOCO1'protein_coding'622AELoss-10.492AB E16_Aa0
1472254.24SFRS12'protein_coding'317AELoss-6.014EU AB E9_Da0
1482264.24DOCK11'protein_coding'358AELoss-6.442EU E6a_E7a0.00
1492284.23GABRA2'protein_coding'212AELoss-12.984EU E5a_E6a100.00
1502294.22OFD1'protein_coding'938AELoss-5.193EU AB E3_Da0.00
1512304.22PIK3R1'protein_coding'420AELoss-14.984EU ES AB E8a_E9a100.00
1522354.21CNOT4'protein_coding'1236AELoss-5.172AB E14_Db0
1532364.21XPO5'protein_coding'1670AELoss-7.032EU E7a_E8a100.00
1542384.21USP34'protein_coding'27142AELoss-5.686EU AB E76_Ab0
1552404.20DDX27'protein_coding'530AELoss-6.712EU E16a_E17a0.00
1562424.20PAN3'protein_coding'625AELoss-6.494EU AB E18_Da0.00
1572434.20PBRM1'protein_coding'2167AELoss-6.034EU E19a_E20a33.33
1582444.20WNK2'protein_coding'2063AELoss-6.652EU AB E32_Aa0
1592464.19DYM'protein_coding'319AELoss-6.123EU AB E8_Da0.00
1602484.19SRR'protein_coding'18AELoss-6.451EU E1a_E2a0
1612494.18TIA1'protein_coding'2161AELoss-6.454EU ES AB E4a_E6c0.00
1622504.18DNMT1'protein_coding'241AELoss-4.952EU E1a_E2a0.00
1632524.18C2orf18'protein_coding'613AELoss-5.622EU AB E6_Dd0
1642544.17RC3H1'protein_coding'528AELoss-6.553EU AB E2_Ab0
1652564.17ZFR'protein_coding'325AELoss-5.671EU E2a_E3a0
1662594.16SETDB1'protein_coding'1551AELoss-6.155EU E13a_E14a0.00
1672604.16NUP214'protein_coding'1257AELoss-6.646EU AB ER1c0.00
1682624.15ZEB1'protein_coding'1029AELoss-6.411AB E16_Aa0
1692634.15CYTSB'protein_coding'1030AELoss-4.174EU AB E13_Aa0.00
1702664.15IPCEF1'protein_coding'520DELoss-9.973EU AB IPCEF1100.00
1712684.15PKN2'protein_coding'836AELoss-5.702EU AB E11b_E12a0
1722704.14KIAA0913'protein_coding'1552AELoss-5.984EU AB E10_Aa0.00
1732734.14KLHL24'protein_coding'1637AELoss-10.172EU AB E12_Da0
1742774.14SPG20'protein_coding'1439AELoss-5.792ES E4a_E6b0.00
1752784.14LMAN1'protein_coding'113AELoss-5.432EU AB E10_Aa0
1762794.14WWOX'protein_coding'618AELoss-5.711EU E7a_E8a0
1772824.13ARNTL2'protein_coding'520AELoss-6.441AB E7_Aa0
1782834.13MAX'protein_coding'819AELoss-6.011AB E6_Ac0
1792874.12FRMD3'protein_coding'1028AELoss-6.152ES AB E20_Da0
1802884.12MLLT10'protein_coding'1854AELoss-6.545EU AB E28_Da0.00
1812914.11GUSBL1'protein_coding'521AELoss-6.201EU ER9a0
1822924.11JMJD1C'protein_coding'1044AELoss-5.545EU AB E25a_E26a33.33
1832944.11ZC3H12C'protein_coding'27AELoss-6.102EU CE I1_AR10
1842974.11CCDC144A'protein_coding'1449AELoss-6.293AB E24_Da0
1852984.11NRXN2'protein_coding'2051AELoss-6.284EU E19a_E20a0.00
1862994.10ARHGEF4'protein_coding'1029AELoss-5.732AB E11_Ab0
1873014.10GPR98'protein_coding'699AELoss-12.9913EU E13a_E14a16.67
1883024.10GLTSCR2'protein_coding'425AELoss-6.382EU E9d_E10a100.00
1893044.10FANCL'protein_coding'1033AELoss-5.0610EU ES AB E1_Ag40.00
1903054.09CEPT1'protein_coding'1024AELoss-11.483EU AB E13_Db0.00
1913074.09RAB28'protein_coding'413AELoss-5.231AB E10_Aa0
1923094.09CLIP4'protein_coding'1649AELoss-6.524EU ES AB E4b_E6a50.00
1933104.09PRUNE'protein_coding'1226AELoss-6.452EU E2a_E3a100.00
1943114.09SPATA7'protein_coding'419AELoss-5.102AB E4_Da0
1953124.09LL22NC03-80A10.2'protein_coding'418AELoss-5.921AB E6_Aa0
1963154.09NCRNA00153'protein_coding'1335AELoss-5.721AB E9_Aa0
1973174.09POGZ'protein_coding'1848AELoss-5.652AB E9_Aa0
1983184.09CEP110'protein_coding'1771AELoss-5.968EU AB ER1b0.00
1993194.08UBE3A'protein_coding'519AELoss-13.377EU AB E8_Da0
2003204.08NFKB1'protein_coding'227AELoss-5.323EU AB E9_Aa0.00
2013214.08ACADM'protein_coding'521AELoss-6.355EU ES AB E8_Da0.00
2023224.08KDM6A'protein_coding'1145AELoss-5.143EU AB E20_Aa0.00
2033234.08TRA2B'protein_coding'1847AELoss-7.808EU AB CE E9_Dd75.00
2043244.07MDC1'protein_coding'1543AELoss-5.212EU AB E6_Db0
2053254.07NFX1'protein_coding'737AELoss-5.302EU AB E6_Aa0
2063274.07IQCK'protein_coding'313AELoss-5.093EU AB E7_Aa0.00
2073294.07AKT2'protein_coding'2672AELoss-5.045EU ES AB E9b_E11b0.00
2083304.06XAF1'protein_coding'612AELoss-5.563EU E4a_E5a50.00
2093324.06C3orf63'protein_coding'1246AELoss-5.103EU AB E24_Aa0.00
2103354.06MTERFD2'protein_coding'2252AELoss-5.084EU AB E3_Da0.00
2113364.06ARMCX2'protein_coding'1332AELoss-6.182AB E5_Dg0
2123374.06TMCO7'protein_coding'118AELoss-5.481EU E15a_E16a0
2133384.05ACTR2'protein_coding'418AELoss-15.293EU ES E2a_E3b50.00
2143404.05TRIM2'protein_coding'1131AELoss-5.315EU ES AB E7a_E8b66.67
2153414.05SNRNP200'protein_coding'965AELoss-5.685EU AB E38a_E39a0.00
2163424.05SMG5'protein_coding'838AELoss-5.864EU ER19b0.00
2173434.04DGKZ'protein_coding'639AELoss-5.034EU AB CE E31_Db0.00
2183444.04RANBP17'protein_coding'230AELoss-6.794EU AB ER1b50.00
2193454.04POLR3D'protein_coding'210AELoss-5.111EU E1a_E2b0
2203464.04PHF1'protein_coding'1548AELoss-10.643EU AB E13_De0.00
2213504.03C17orf28'protein_coding'323AELoss-5.881EU E14a_E15a0
2223524.03PHACTR4'protein_coding'729AELoss-4.934EU ENST0000037383766.67
2233594.02GRIK3'protein_coding'422AELoss-5.534EU ES AB E7a_E8a50.00
2243604.02DGCR2'protein_coding'622AELoss-5.701EU E12b_E13a0
2253634.00PET112L'protein_coding'113AELoss-16.033EU E8a_E9a0.00
2263664.00CXorf23'protein_coding'724AELoss-5.164EU AB E11_Db0
2273674.00POU2F1'protein_coding'1239AELoss-5.568EU AB E15_Da0.00
2283684.00RPTOR'protein_coding'134AELoss-5.434EU E25a_E26a33.33
2293703.99MDM2'protein_coding'2236AELoss-5.562EU AB E4_Aa0
2303713.99DMWD'protein_coding'25AELoss-4.582EU E4a_E5a0.00
2313723.99ERAP1'protein_coding'222AELoss-6.181EU E15a_E16a0
2323733.99DMD'protein_coding'30127AELoss-5.087EU ES AB E55a_E56a0.00
2333753.99RNF216L'protein_coding'1939AELoss-12.544EU AB ER1h50.00
2343783.98DAG1'protein_coding'1948AELoss-5.682EU AB E9_Db0
2353793.98LRIG1'protein_coding'1239AELoss-5.433EU ES AB E21_Da0.00
2363823.98C12orf66'protein_coding'26AELoss-5.832EU AB E1a_E2a0
2373843.97FLNB'protein_coding'1668AELoss-4.039EU ES AB E28_Aa28.57
2383853.97NFRKB'protein_coding'227AELoss-6.033EU E10a_E11a50.00
2393863.97NFASC'protein_coding'2563AELoss-5.249EU ES AB E32_Aa16.67
2403873.97TMEM2'protein_coding'837AELoss-5.881AB E14_Aa0
2413883.96ADRM1'protein_coding'620AELoss-5.622EU E2b_E3b100.00
2423903.96ETV6'protein_coding'212AELoss-10.382EU E9a_E10a100.00
2433913.96ACACB'protein_coding'461AELoss-5.707EU ES E47a_E49a0.00
2443923.96PDE1A'protein_coding'1234AELoss-6.145AB CE E11_Da0
2453933.96TRIM33'protein_coding'727AELoss-5.944EU AB E14_Aa0.00
2463943.95MMP24'protein_coding'19AELoss-9.133EU E2a_E3a100.00
2473993.94RUSC1'protein_coding'1940AELoss-12.276EU E7a_E8a0.00
2484013.93HELZ'protein_coding'133AELoss-5.901AB E23_Aa0
2494023.93C1orf27'protein_coding'621AELoss-5.733EU ES AB E16_Aa0.00
2504033.93KIAA2026'protein_coding'211AELoss-5.021CE I4_AR20
2514053.93PIAS3'protein_coding'931AELoss-9.044EU ES AB E2a_E4a50.00