Study Comparison Entry Entrez_id Entrez_name Entrez_description Map_method n_studies n_comparisons n_total_samples net_fold_change net_direction net_direction_score n_disagreements up_down avg_fold_change n_comparisons_FC n_total_samples_FC max_fold_change min_fold_change Probe_Tag_Acc Probe Tag Accession Description Gene Fold_change Std_Fold_Change up_down_cond1_vs_cond2 RT-PCR Western IHC Class_predictor Signif Pvalue_listed Cond1 Cond2 n_cond1 n_cond2 Source Comment PMID 15 22 1040 31 ACACA acetyl-Coenzyme A carboxylase alpha Gene_symbol_2_NCBI_Entrez 1 1 7 -2 down 1 0 0/1 -2 1 7 -2.00 -2.00 Acetyl-Coenzyme A carboxylase ACACA 0.5 -2.00 down FTC FA 3 4 publication 15475448 16 24 1239 97 ACYP1 acylphosphatase 1, erythrocyte (common) type Gene_symbol_2_NCBI_Entrez 1 1 63 -1.94 down 1 0 0/1 -1.94 1 63 -1.94 -1.94 ACYP1 0.516587678 -1.94 down 0.01 PTC;FVPTC FA;HN 32 31 publication 15087409 15 22 1023 107 ADCY1 adenylate cyclase 1 (brain) Gene_symbol_2_NCBI_Entrez 1 1 7 4 up 1 0 1/0 4 1 7 4.00 4.00 Adenylate cyclase 1 ADCY1 4 4.00 up FTC FA 3 4 publication 15475448 13 20 864 133 ADM adrenomedullin clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 2.8 up 2 0 2/0 2.8 1 59 2.80 2.80 D14874 D14874 Adrenomedullin ADM up FTC FA 9 10 publication 12738736 18 31 1328 133 ADM adrenomedullin clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 2.8 up 2 0 2/0 2.8 1 59 2.80 2.80 D14874 D14874 Adrenomedullin AM 2.8 2.80 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1379 221 ALDH3B1 aldehyde dehydrogenase 3 family, member B1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.1 up 1 0 1/0 2.1 1 59 2.10 2.10 U10868 U10868 Aldehyde dehydrogenase 7 ALDH7 2.1 2.10 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 17 29 1288 226 ALDOA aldolase A, fructose-bisphosphate tag_2_refseq_or_mgc_2_Entrez 1 1 2 0 up 1 0 1/0 0 0 0 0 0 GCGACCGTCA GCGACCGTCA up PTC FA 1 1 publication 11076659 18 31 1337 284 ANGPT1 angiopoietin 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.7 down 1 0 0/1 -2.7 1 59 -2.70 -2.70 U83508 U83508 Angiopoietin-1 ANG1 2.7 -2.70 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1352 301 ANXA1 annexin A1 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 83 5.5 up 2 0 2/0 2.75 2 83 3.1 2.40 X05908 X05908 Lipocortin LPC1 2.4 2.40 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 640 301 ANXA1 annexin A1 affy_probe_2_Entrez 2 2 83 5.5 up 2 0 2/0 2.75 2 83 3.1 2.40 201012_at 201012_at annexin A1 -3.1 3.1 up 0.000433 FA FTC 12 12 provided by authors 15713710 15 22 1059 328 APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1 Gene_symbol_2_NCBI_Synonym_2_Entrez 1 1 7 -5 down 1 0 0/1 -5 1 7 -5.00 -5.00 Multifunctional DNA repair enzyme APEX 0.2 -5.00 down FTC FA 3 4 publication 15475448 9 14 649 334 APLP2 amyloid beta (A4) precursor-like protein 2 affy_probe_2_Entrez 1 1 24 3.24 up 1 0 1/0 3.24 1 24 3.24 3.24 214875_x_at 214875_x_at amyloid beta (A4) precursor-like protein 2 -3.24 3.24 up 0.0001 FA FTC 12 12 provided by authors 15713710 18 31 1329 348 APOE apolipoprotein E clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.8 up 1 0 1/0 2.8 1 59 2.80 2.80 M12529 M12529 Apolipoprotein E precursor APOE 2.8 2.80 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 15 22 1038 361 AQP4 aquaporin 4 Gene_symbol_2_NCBI_Entrez 1 1 7 -2 down 1 0 0/1 -2 1 7 -2.00 -2.00 Aquaporin 4 AQP4 0.5 -2.00 down FTC FA 3 4 publication 15475448 15 22 1048 400 ARL1 ADP-ribosylation factor-like 1 Gene_symbol_2_NCBI_Entrez 1 1 7 -2.5 down 1 0 0/1 -2.5 1 7 -2.50 -2.50 ADP-ribosylation factor-like 1 ARL1 0.4 -2.50 down FTC FA 3 4 publication 15475448 13 20 865 440 ASNS asparagine synthetase clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 43 -3.09 even 1 1 1/1 -3.09 1 24 -3.09 -3.09 M27396 M27396 Asparagine synthetase ASNS up FTC FA 9 10 publication 12738736 9 14 613 440 ASNS asparagine synthetase affy_probe_2_Entrez 2 2 43 -3.09 even 1 1 1/1 -3.09 1 24 -3.09 -3.09 205047_s_at 205047_s_at asparagine synthetase 3.09 -3.09 down 0.002073 FA FTC 12 12 provided by authors 15713710 16 24 1224 501 ALDH7A1 aldehyde dehydrogenase 7 family, member A1 Gene_symbol_2_NCBI_Entrez 1 1 63 -1.68 down 1 0 0/1 -1.68 1 63 -1.68 -1.68 ALDH7A1 0.596273292 -1.68 down 0.04 PTC;FVPTC FA;HN 32 31 publication 15087409 13 20 867 581 BAX BCL2-associated X protein clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 U19599 U19599 Bcl-2-associated X protein BAX up FTC FA 9 10 publication 12738736 18 31 1396 622 BDH 3-hydroxybutyrate dehydrogenase (heart, mitochondrial) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2 down 1 0 0/1 -2 1 59 -2.00 -2.00 M93107 M93107 Heart (R)-3-hydroxybutyrate dehydrogenase BDH 2 -2.00 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 15 22 1050 664 BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 Gene_symbol_2_NCBI_Entrez 1 1 7 -3.33 down 1 0 0/1 -3.33 1 7 -3.33 -3.33 BCL2 interacting protein 3 BNIP3 0.3 -3.33 down FTC FA 3 4 publication 15475448 18 31 1371 672 BRCA1 breast cancer 1, early onset clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.2 down 1 0 0/1 -2.2 1 59 -2.20 -2.20 L78833 L78833 L21 ribosomal protein pseudogene PSCP 2.2 -2.20 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1372 678 ZFP36L2 zinc finger protein 36, C3H type-like 2 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.2 down 1 0 0/1 -2.2 1 59 -2.20 -2.20 U07802 U07802 Tis11d early response gene TIS11D 2.2 -2.20 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 866 682 BSG basigin (OK blood group) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 X64364 X64364 Basigin (OK blood group) BSG up yes FTC FA 9 10 publication 12738736 16 24 1244 744 C11orf8 chromosome 11 open reading frame 8 Gene_symbol_2_NCBI_Entrez 1 1 63 -2.25 down 1 0 0/1 -2.25 1 63 -2.25 -2.25 C11orf8 0.444444444 -2.25 down yes 0.02 PTC;FVPTC FA;HN 32 31 publication 15087409 13 20 873 753 C18orf1 chromosome 18 open reading frame 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 AF009426 AF009426 Chromosome 18 open-reading frame 1 C18orf1 up FTC FA 9 10 publication 12738736 16 24 1223 757 TMEM50B transmembrane protein 50B Gene_symbol_2_NCBI_Synonym_2_Entrez 1 1 63 -1.67 down 1 0 0/1 -1.67 1 63 -1.67 -1.67 C21orf4 0.597402597 -1.67 down yes 0.0001 PTC;FVPTC FA;HN 32 31 publication 15087409 13 20 925 762 CA4 carbonic anhydrase IV clone_accession_2_NCBI_rna_accession_2_Entrez 3 3 102 0.43 down 2 1 1/2 0.215 2 83 3.13 -2.70 M83670 M83670 Carbonic anhydrase IV CA4 down FTC FA 9 10 publication 12738736 18 31 1338 762 CA4 carbonic anhydrase IV clone_accession_2_NCBI_rna_accession_2_Entrez 3 3 102 0.43 down 2 1 1/2 0.215 2 83 3.13 -2.70 M83670 M83670 Carbonic anhydrase IV CAIV 2.7 -2.70 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 643 762 CA4 carbonic anhydrase IV affy_probe_2_Entrez 3 3 102 0.43 down 2 1 1/2 0.215 2 83 3.13 -2.70 206209_s_at 206209_s_at carbonic anhydrase IV -3.13 3.13 up 0.002362 FA FTC 12 12 provided by authors 15713710 13 20 869 771 CA12 carbonic anhydrase XII clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 3.3 up 2 0 2/0 3.3 1 59 3.30 3.30 AF037335 AF037335 Carbonic anhydrase XII CA12 up FTC FA 9 10 publication 12738736 18 31 1319 771 CA12 carbonic anhydrase XII clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 3.3 up 2 0 2/0 3.3 1 59 3.30 3.30 AF037335 AF037335 Carbonic anhydrase precursor CA 12 3.3 3.30 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 908 778 CACNA1F calcium channel, voltage-dependent, alpha 1F subunit clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 U93305 U93305 Proteolipid protein 2 PLP2 up FTC FA 9 10 publication 12738736 15 22 1036 846 CASR calcium-sensing receptor (hypocalciuric hypercalcemia 1, severe neonatal hyperparathyroidism) Gene_symbol_2_NCBI_Entrez 1 1 7 -2 down 1 0 0/1 -2 1 7 -2.00 -2.00 Calcium-sensing receptor CASR 0.5 -2.00 down FTC FA 3 4 publication 15475448 13 20 874 875 CBS cystathionine-beta-synthase clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 L00972 L00972 Cystathionine-beta-synthetase CBS up FTC FA 9 10 publication 12738736 9 14 677 894 CCND2 cyclin D2 affy_probe_2_Entrez 1 1 24 11.72 up 1 0 1/0 11.72 1 24 11.72 11.72 200953_s_at 200953_s_at cyclin D2 -3.9 3.9 up 0.000164 FA FTC 12 12 provided by authors 15713710 9 14 700 894 CCND2 cyclin D2 affy_probe_2_Entrez 1 1 24 11.72 up 1 0 1/0 11.72 1 24 11.72 11.72 200952_s_at 200952_s_at cyclin D2 -11.72 11.72 up 0.00255 FA FTC 12 12 provided by authors 15713710 9 14 657 948 CD36 CD36 antigen (collagen type I receptor, thrombospondin receptor) affy_probe_2_Entrez 1 1 24 3.42 up 1 0 1/0 3.42 1 24 3.42 3.42 206488_s_at 206488_s_at CD36 antigen (collagen type I receptor, thrombospondin receptor) -3.42 3.42 up 0.000077 FA FTC 12 12 provided by authors 15713710 9 14 684 953 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 affy_probe_2_Entrez 1 1 24 8.82 up 1 0 1/0 8.82 1 24 8.82 8.82 209473_at 209473_at ectonucleoside triphosphate diphosphohydrolase 1 -4.2 4.2 up 0.005397 FA FTC 12 12 provided by authors 15713710 9 14 693 953 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 affy_probe_2_Entrez 1 1 24 8.82 up 1 0 1/0 8.82 1 24 8.82 8.82 207691_x_at 207691_x_at ectonucleoside triphosphate diphosphohydrolase 1 -5.01 5.01 up 0.007791 FA FTC 12 12 provided by authors 15713710 9 14 699 953 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 affy_probe_2_Entrez 1 1 24 8.82 up 1 0 1/0 8.82 1 24 8.82 8.82 209474_s_at 209474_s_at ectonucleoside triphosphate diphosphohydrolase 1 -8.82 8.82 up 0.007519 FA FTC 12 12 provided by authors 15713710 9 14 655 960 CD44 CD44 antigen (homing function and Indian blood group system) affy_probe_2_Entrez 1 1 24 4.51 up 1 0 1/0 4.51 1 24 4.51 4.51 212014_x_at 212014_x_at CD44 antigen (homing function and Indian blood group system) -3.3 3.3 up 0.001058 FA FTC 12 12 provided by authors 15713710 9 14 665 960 CD44 CD44 antigen (homing function and Indian blood group system) affy_probe_2_Entrez 1 1 24 4.51 up 1 0 1/0 4.51 1 24 4.51 4.51 209835_x_at 209835_x_at CD44 antigen (homing function and Indian blood group system) -3.62 3.62 up 0.000999 FA FTC 12 12 provided by authors 15713710 9 14 666 960 CD44 CD44 antigen (homing function and Indian blood group system) affy_probe_2_Entrez 1 1 24 4.51 up 1 0 1/0 4.51 1 24 4.51 4.51 212063_at 212063_at CD44 antigen (homing function and Indian blood group system) -3.63 3.63 up 0.000459 FA FTC 12 12 provided by authors 15713710 9 14 670 960 CD44 CD44 antigen (homing function and Indian blood group system) affy_probe_2_Entrez 1 1 24 4.51 up 1 0 1/0 4.51 1 24 4.51 4.51 217523_at 217523_at ESTs, Highly similar to CD44_HUMAN CD44 antigen precursor -3.73 3.73 up 0.000505 FA FTC 12 12 provided by authors 15713710 9 14 676 960 CD44 CD44 antigen (homing function and Indian blood group system) affy_probe_2_Entrez 1 1 24 4.51 up 1 0 1/0 4.51 1 24 4.51 4.51 204490_s_at 204490_s_at CD44 antigen (homing function and Indian blood group system) -3.9 3.9 up 0.000901 FA FTC 12 12 provided by authors 15713710 9 14 689 960 CD44 CD44 antigen (homing function and Indian blood group system) affy_probe_2_Entrez 1 1 24 4.51 up 1 0 1/0 4.51 1 24 4.51 4.51 204489_s_at 204489_s_at CD44 antigen (homing function and Indian blood group system) -4.51 4.51 up 0.001994 FA FTC 12 12 provided by authors 15713710 15 22 1025 961 CD47 CD47 antigen (Rh-related antigen, integrin-associated signal transducer) Gene_symbol_2_NCBI_Entrez 1 1 7 3 up 1 0 1/0 3 1 7 3.00 3.00 CD47 antigen CD47 3 3.00 up FTC FA 3 4 publication 15475448 16 24 1216 999 CDH1 cadherin 1, type 1, E-cadherin (epithelial) Gene_symbol_2_NCBI_Entrez 1 1 63 -1.74 down 1 0 0/1 -1.74 1 63 -1.74 -1.74 CDH1 0.625954198 -1.60 down 0.04 PTC;FVPTC FA;HN 32 31 publication 15087409 16 24 1228 999 CDH1 cadherin 1, type 1, E-cadherin (epithelial) Gene_symbol_2_NCBI_Entrez 1 1 63 -1.74 down 1 0 0/1 -1.74 1 63 -1.74 -1.74 CDH1 0.57615894 -1.74 down yes 0.001 PTC;FVPTC FA;HN 32 31 publication 15087409 13 20 870 1054 CEBPG CCAAT/enhancer binding protein (C/EBP), gamma clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 U20240 U20240 CCAAT/enhancer binding protein (C/EBP), CEBPG up FTC FA 9 10 publication 12738736 18 31 1324 1152 CKB creatine kinase, brain clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -3.1 down 1 0 0/1 -3.1 1 59 -3.10 -3.10 X15334 X15334 Creatine kinase B CKBB 3.1 -3.10 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 17 26 1266 1277 COL1A1 collagen, type I, alpha 1 tag_2_refseq_or_mgc_2_Entrez 1 1 2 0 up 1 0 1/0 0 0 0 0 0 ACCAAAAACC ACCAAAAACC up FTC FA 1 1 publication 11076659 10 16 712 1293 COL6A3 collagen, type VI, alpha 3 affy_probe_2_Entrez 1 1 14 8.54 up 1 0 1/0 8.54 1 14 8.54 8.54 38077_at 38077_at Collagen, type VI, alpha 3 COL6A3 8.54 8.54 up no PTC GT 8 6 publication 15515157 10 16 746 1299 COL9A3 collagen, type IX, alpha 3 affy_probe_2_Entrez 2 2 73 -14.53 down 2 0 0/2 -7.265 2 73 -4.50 -10.03 36455_at 36455_at Collagen, type IX, alpha 3 COL9A3 -10.03 -10.03 down yes PTC GT 8 6 publication 15515157 18 31 1307 1299 COL9A3 collagen, type IX, alpha 3 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 73 -14.53 down 2 0 0/2 -7.265 2 73 -4.50 -10.03 L41162 L41162 Collagen alpha 3 type IX (COL9A3) EDM3 4.5 -4.50 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 926 1306 COL15A1 collagen, type XV, alpha 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 L25286 L25286 Collagen, type XV, 1 COL15A1 down FTC FA 9 10 publication 12738736 9 14 667 1363 CPE carboxypeptidase E affy_probe_2_Entrez 1 1 24 3.72 up 1 0 1/0 3.72 1 24 3.72 3.72 201117_s_at 201117_s_at carboxypeptidase E -3.72 3.72 up 0.000008 FA FTC 12 12 provided by authors 15713710 18 31 1376 1381 CRABP1 cellular retinoic acid binding protein 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.2 down 1 0 0/1 -2.2 1 59 -2.20 -2.20 S74445 S74445 Cellular retinoic acid-binding protein I CRABPI 2.2 -2.20 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 924 1390 CREM cAMP responsive element modulator clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 S68271 S68271 cAMP-responsive element modulator CREM down FTC FA 9 10 publication 12738736 9 14 606 1410 CRYAB crystallin, alpha B affy_probe_2_Entrez 1 1 24 -4.63 down 1 0 0/1 -4.63 1 24 -4.63 -4.63 209283_at 209283_at crystallin, alpha B 4.63 -4.63 down 0.006704 FA FTC 12 12 provided by authors 15713710 18 31 1384 1466 CSRP2 cysteine and glycine-rich protein 2 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.1 down 1 0 0/1 -2.1 1 59 -2.10 -2.10 U57646 U57646 Cysteine and glycine-rich protein 2 CSRP2 2.1 -2.10 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1345 1512 CTSH cathepsin H clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.5 up 1 0 1/0 2.5 1 59 2.50 2.50 X16832 X16832 Preprocathepsin H CPSB 2.5 2.50 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 10 16 734 1525 CXADR coxsackie virus and adenovirus receptor affy_probe_2_Entrez 1 1 14 -3.33 down 1 0 0/1 -3.33 1 14 -3.33 -3.33 37534_at 37534_at Coxsackievirus and adenovirus receptor CXADR -3.33 -3.33 down yes PTC GT 8 6 publication 15515157 9 14 615 1538 CYLC1 cylicin, basic protein of sperm head cytoskeleton 1 affy_probe_2_Entrez 1 1 24 -2.93 down 1 0 0/1 -2.93 1 24 -2.93 -2.93 216778_s_at 216778_s_at cylicin, basic protein of sperm head cytoskeleton 1 2.93 -2.93 down 0.000612 FA FTC 12 12 provided by authors 15713710 18 31 1301 1545 CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 6 up 1 0 1/0 6 1 59 6.00 6.00 U03688 U03688 Dioxin-inducible cytochrome P450 GLC3A 6 6.00 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 875 1649 DDIT3 DNA-damage-inducible transcript 3 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 S62138 S62138 DNA damage-inducible transcript 3 DDIT3 up FTC FA 9 10 publication 12738736 13 20 923 1733 DIO1 deiodinase, iodothyronine, type I clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.3 down 2 0 0/2 -2.3 1 59 -2.30 -2.30 S48220 S48220 5iodothyronine deiodinase down FTC FA 9 10 publication 12738736 18 31 1363 1733 DIO1 deiodinase, iodothyronine, type I clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.3 down 2 0 0/2 -2.3 1 59 -2.30 -2.30 S48220 S48220 Type I 5iodothyronine deiodinase TXDI1 2.3 -2.30 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 16 24 1246 1734 DIO2 deiodinase, iodothyronine, type II Gene_symbol_2_NCBI_Entrez 1 1 63 -2.79 down 1 0 0/1 -2.79 1 63 -2.79 -2.79 DIO2 0.358974359 -2.79 down 0.02 PTC;FVPTC FA;HN 32 31 publication 15087409 13 20 876 1796 DOK1 docking protein 1, 62kDa (downstream of tyrosine kinase 1) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 AF035299 AF035299 Docking protein 1 (downstream of tyrosine kinase 1) DOK1 up FTC FA 9 10 publication 12738736 9 14 656 1806 DPYD dihydropyrimidine dehydrogenase affy_probe_2_Entrez 1 1 24 3.33 up 1 0 1/0 3.33 1 24 3.33 3.33 204646_at 204646_at dihydropyrimidine dehydrogenase -3.33 3.33 up 0.000767 FA FTC 12 12 provided by authors 15713710 15 22 1061 1843 DUSP1 dual specificity phosphatase 1 Gene_symbol_2_NCBI_Entrez 1 1 7 -10 down 1 0 0/1 -10 1 7 -10.00 -10.00 Dual specificity phosphatase 1 DUSP1 0.1 -10.00 down FTC FA 3 4 publication 15475448 18 31 1308 1846 DUSP4 dual specificity phosphatase 4 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 4.2 up 1 0 1/0 4.2 1 59 4.20 4.20 U48807 U48807 MAP kinase phosphatase MKP-2 4.2 4.20 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 15 22 1053 1847 DUSP5 dual specificity phosphatase 5 Gene_symbol_2_NCBI_Entrez 3 3 129 4.32 up 2 1 2/1 1.44 3 129 4.05 -3.33 Dual specificity phosphatase 5 DUSP5 0.3 -3.33 down yes FTC FA 3 4 publication 15475448 16 24 1203 1847 DUSP5 dual specificity phosphatase 5 Gene_symbol_2_NCBI_Entrez 3 3 129 4.32 up 2 1 2/1 1.44 3 129 4.05 -3.33 DUSP5 4.051546392 4.05 up 0.01 PTC;FVPTC FA;HN 32 31 publication 15087409 18 31 1312 1847 DUSP5 dual specificity phosphatase 5 clone_accession_2_NCBI_rna_accession_2_Entrez 3 3 129 4.32 up 2 1 2/1 1.44 3 129 4.05 -3.33 U15932 U15932 Dual-specificity protein phosphatase HVH3 3.6 3.60 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 668 1848 DUSP6 dual specificity phosphatase 6 affy_probe_2_Entrez 1 1 24 5.22 up 1 0 1/0 5.22 1 24 5.22 5.22 208891_at 208891_at dual specificity phosphatase 6 -3.72 3.72 up 0.000007 FA FTC 12 12 provided by authors 15713710 9 14 694 1848 DUSP6 dual specificity phosphatase 6 affy_probe_2_Entrez 1 1 24 5.22 up 1 0 1/0 5.22 1 24 5.22 5.22 208892_s_at 208892_s_at dual specificity phosphatase 6 -5.22 5.22 up 0.000084 FA FTC 12 12 provided by authors 15713710 13 20 928 1959 EGR2 early growth response 2 (Krox-20 homolog, Drosophila) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 J04076 J04076 Early growth response 2 EGR2 down FTC FA 9 10 publication 12738736 16 24 1207 1999 ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) Gene_symbol_2_NCBI_Entrez 1 1 63 1.77 up 1 0 1/0 1.77 1 63 1.77 1.77 ELF3 1.768292683 1.77 up 0.04 PTC;FVPTC FA;HN 32 31 publication 15087409 18 31 1381 2059 EPS8 epidermal growth factor receptor pathway substrate 8 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 83 5.12 up 2 0 2/0 2.56 2 83 3.02 2.10 U12535 U12535 Epidermal growth factor receptor kinase substrate Eps8 2.1 2.10 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 633 2059 EPS8 epidermal growth factor receptor pathway substrate 8 affy_probe_2_Entrez 2 2 83 5.12 up 2 0 2/0 2.56 2 83 3.02 2.10 202609_at 202609_at epidermal growth factor receptor pathway substrate 8 -3.02 3.02 up 0.002265 FA FTC 12 12 provided by authors 15713710 13 20 900 2063 NR2F6 nuclear receptor subfamily 2, group F, member 6 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 X12794 X12794 Nuclear receptor subfamily 2, group F, member 6 NR2F6 up FTC FA 9 10 publication 12738736 18 31 1377 2065 ERBB3 v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.1 up 1 0 1/0 2.1 1 59 2.10 2.10 M34309 M34309 HER3 protein precursor HER3 2.1 2.10 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 642 2119 ETV5 ets variant gene 5 (ets-related molecule) affy_probe_2_Entrez 1 1 24 3.45 up 1 0 1/0 3.45 1 24 3.45 3.45 203348_s_at 203348_s_at ets variant gene 5 (ets-related molecule) -3.12 3.12 up 0.001774 FA FTC 12 12 provided by authors 15713710 9 14 659 2119 ETV5 ets variant gene 5 (ets-related molecule) affy_probe_2_Entrez 1 1 24 3.45 up 1 0 1/0 3.45 1 24 3.45 3.45 203349_s_at 203349_s_at ets variant gene 5 (ets-related molecule) -3.45 3.45 up 0.002668 FA FTC 12 12 provided by authors 15713710 15 22 1034 2132 EXT2 exostoses (multiple) 2 Gene_symbol_2_NCBI_Entrez 1 1 7 -2 down 1 0 0/1 -2 1 7 -2.00 -2.00 Exostose 2 EXT2 0.5 -2.00 down FTC FA 3 4 publication 15475448 18 31 1305 2167 FABP4 fatty acid binding protein 4, adipocyte clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -4.9 down 1 0 0/1 -4.9 1 59 -4.90 -4.90 AA128249 AA128249 Fatty acid-binding protein, human FABP4 4.9 -4.90 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 933 2200 FBN1 fibrillin 1 (Marfan syndrome) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 X63556 X63556 Fibrillin 1 FBN1 down FTC FA 9 10 publication 12738736 13 20 932 2217 FCGRT Fc fragment of IgG, receptor, transporter, alpha clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.8 down 2 0 0/2 -2.8 1 59 -2.80 -2.80 U12255 U12255 Fc fragment of IgG, receptor, transporter FCGRT down FTC FA 9 10 publication 12738736 18 31 1333 2217 FCGRT Fc fragment of IgG, receptor, transporter, alpha clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.8 down 2 0 0/2 -2.8 1 59 -2.80 -2.80 U12255 U12255 Human IgG Fc receptor FCGRT 2.8 -2.80 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 609 2258 FGF13 fibroblast growth factor 13 affy_probe_2_Entrez 1 1 24 -3.85 down 1 0 0/1 -3.85 1 24 -3.85 -3.85 205110_s_at 205110_s_at fibroblast growth factor 13 3.85 -3.85 down 0.002058 FA FTC 12 12 provided by authors 15713710 18 31 1346 2263 FGFR2 fibroblast growth factor receptor 2 (bacteria-expressed kinase, keratinocyte growth factor receptor, craniofacial dysostosis 1, Crouzon syndrome, Pfeiffer syndrome, Jackson-Weiss syndrome) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.1 down 1 0 0/1 -2.1 1 59 -2.10 -2.10 Z71929 Z71929 Fibroblast growth factor receptor 2 FGFR2 2.5 -2.50 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1390 2263 FGFR2 fibroblast growth factor receptor 2 (bacteria-expressed kinase, keratinocyte growth factor receptor, craniofacial dysostosis 1, Crouzon syndrome, Pfeiffer syndrome, Jackson-Weiss syndrome) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.1 down 1 0 0/1 -2.1 1 59 -2.10 -2.10 M87770 M87770 Fibroblast growth factor receptor K-sam-I 2.1 -2.10 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1388 2273 FHL1 four and a half LIM domains 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.1 down 1 0 0/1 -2.1 1 59 -2.10 -2.10 AF063002 AF063002 Skeletal and cardiac muscle SLIM isoform SLIM1 2.1 -2.10 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1302 2335 FN1 fibronectin 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 5.2 up 1 0 1/0 5.2 1 59 5.20 5.20 M10905 M10905 Fibronectin FN1 5.2 5.20 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 880 2358 FPRL1 formyl peptide receptor-like 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 M84562 M84562 Formyl peptide receptor-like 1 FPRL1 up FTC FA 9 10 publication 12738736 13 20 936 2697 GJA1 gap junction protein, alpha 1, 43kDa (connexin 43) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.4 down 2 0 0/2 -2.4 1 59 -2.40 -2.40 X52947 X52947 Gap junction protein, 1, 43 kDa (connexin 43) GJA1 down FTC FA 9 10 publication 12738736 18 31 1357 2697 GJA1 gap junction protein, alpha 1, 43kDa (connexin 43) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.4 down 2 0 0/2 -2.4 1 59 -2.40 -2.40 X52947 X52947 Connexin 43, cardiac gap junction protein CX43 2.4 -2.40 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 620 2776 GNAQ guanine nucleotide binding protein (G protein), q polypeptide affy_probe_2_Entrez 1 1 24 2.73 up 1 0 1/0 2.73 1 24 2.73 2.73 202615_at 202615_at Homo sapiens mRNA; cDNA DKFZp686D0521 (from clone DKFZp686D0521) -2.73 2.73 up 0.000003 FA FTC 12 12 provided by authors 15713710 15 22 1039 2804 GOLGB1 golgi autoantigen, golgin subfamily b, macrogolgin (with transmembrane signal), 1 Gene_symbol_2_NCBI_Entrez 1 1 7 -2 down 1 0 0/1 -2 1 7 -2.00 -2.00 Golgi autoantigen GOLGB1 0.5 -2.00 down FTC FA 3 4 publication 15475448 9 14 612 2805 GOT1 glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1) affy_probe_2_Entrez 1 1 24 -3.31 down 1 0 0/1 -3.31 1 24 -3.31 -3.31 208813_at 208813_at glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1) 3.31 -3.31 down 0.000833 FA FTC 12 12 provided by authors 15713710 13 20 882 2817 GPC1 glypican 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 X54232 X54232 Glypican 1 CGPC1 up FTC FA 9 10 publication 12738736 15 22 1029 2896 GRN granulin Gene_symbol_2_NCBI_Entrez 1 1 7 2 up 1 0 1/0 2 1 7 2.00 2.00 Granulin GRN 2 2.00 up FTC FA 3 4 publication 15475448 13 20 937 2934 GSN gelsolin (amyloidosis, Finnish type) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 X04412 X04412 Gelsolin GSN down FTC FA 9 10 publication 12738736 16 24 1208 2966 GTF2H2 general transcription factor IIH, polypeptide 2, 44kDa Gene_symbol_2_NCBI_Entrez 1 1 63 -1.46 down 1 0 0/1 -1.46 1 63 -1.46 -1.46 GTF2H2 0.683333333 -1.46 down 0.04 PTC;FVPTC FA;HN 32 31 publication 15087409 16 24 1206 2987 GUK1 guanylate kinase 1 Gene_symbol_2_NCBI_Entrez 1 1 63 1.79 up 1 0 1/0 1.79 1 63 1.79 1.79 GUK1 1.793103448 1.79 up 0.02 PTC;FVPTC FA;HN 32 31 publication 15087409 18 31 1339 3081 HGD homogentisate 1,2-dioxygenase (homogentisate oxidase) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.7 down 1 0 0/1 -2.7 1 59 -2.70 -2.70 AF000573 AF000573 Homogentisate 1,2-dioxygenase HGO 2.7 -2.70 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 17 29 1292 3106 HLA-B major histocompatibility complex, class I, B tag_2_refseq_or_mgc_2_Entrez 1 1 2 0 up 1 0 1/0 0 0 0 0 0 CTGACCTGTG CTGACCTGTG up PTC FA 1 1 publication 11076659 18 31 1367 3115 HLA-DPB1 major histocompatibility complex, class II, DP beta 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.2 up 1 0 1/0 2.2 1 59 2.20 2.20 M83664 M83664 MHC class II lymphocyte antigen HLA-DP1B 2.2 2.20 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1361 3119 HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.3 up 1 0 1/0 2.3 1 59 2.30 2.30 M81141 M81141 MHC class II HLA-DQ-beta HLA-DQ-beta 2.3 2.30 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 10 16 713 3134 HLA-F major histocompatibility complex, class I, F affy_probe_2_Entrez 1 1 14 7.99 up 1 0 1/0 7.99 1 14 7.99 7.99 37420_i_at 37420_i_at Human leukocyte antigen F HLA-F 7.99 7.99 up yes PTC GT 8 6 publication 15515157 18 31 1353 3293 HSD17B3 hydroxysteroid (17-beta) dehydrogenase 3 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.4 down 1 0 0/1 -2.4 1 59 -2.40 -2.40 U05659 U05659 17-beta-hydroxysteroid dehydrogenase type 3 EDH17B3 2.4 -2.40 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 16 24 1222 3295 HSD17B4 hydroxysteroid (17-beta) dehydrogenase 4 Gene_symbol_2_NCBI_Entrez 1 1 63 -1.65 down 1 0 0/1 -1.65 1 63 -1.65 -1.65 HSD17B4 0.606896552 -1.65 down 0.03 PTC;FVPTC FA;HN 32 31 publication 15087409 9 14 630 3309 HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) affy_probe_2_Entrez 1 1 24 2.96 up 1 0 1/0 2.96 1 24 2.96 2.96 211936_at 211936_at heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -2.96 2.96 up 0.000005 FA FTC 12 12 provided by authors 15713710 15 22 1043 3337 DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 Gene_symbol_2_NCBI_Entrez 1 1 7 -2.5 down 1 0 0/1 -2.5 1 7 -2.50 -2.50 DNAJ (Hsp40) homolog, subfamily B, member 1 DNAJB1 0.4 -2.50 down FTC FA 3 4 publication 15475448 13 20 884 3371 TNC tenascin C (hexabrachion) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 6.6 up 2 0 2/0 6.6 1 59 6.60 6.60 X78565 X78565 Hexabrachion (tenascin-C) HXB up FTC FA 9 10 publication 12738736 18 31 1299 3371 TNC tenascin C (hexabrachion) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 6.6 up 2 0 2/0 6.6 1 59 6.60 6.60 X78565 X78565 Tenascin-C TNC 6.6 6.60 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 10 16 724 3397 ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein affy_probe_2_Entrez 2 2 73 -5.61 down 2 0 0/2 -2.805 2 73 -2.40 -3.21 36617_at 36617_at Inhibitor of DNA binding 1, ID1 -2.51 -2.51 down yes PTC GT 8 6 publication 15515157 10 16 732 3397 ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein affy_probe_2_Entrez 2 2 73 -5.61 down 2 0 0/2 -2.805 2 73 -2.40 -3.21 36618_g_at 36618_g_at Inhibitor of DNA binding 1, ID1 -3.21 -3.21 down yes PTC GT 8 6 publication 15515157 18 31 1355 3397 ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 73 -5.61 down 2 0 0/2 -2.805 2 73 -2.40 -3.21 X77956 X77956 Human helix-loop-helix Id1protein Id-1 2.4 -2.40 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 944 3400 ID4 inhibitor of DNA binding 4, dominant negative helix-loop-helix protein clone_accession_2_NCBI_rna_accession_2_Entrez 3 3 89 -7.29 down 3 0 0/3 -3.645 2 70 -2.29 -5.00 AL022726 AL022726 Inhibitor of DNA binding 4 ID4 down FTC FA 9 10 publication 12738736 15 22 1060 3400 ID4 inhibitor of DNA binding 4, dominant negative helix-loop-helix protein Gene_symbol_2_NCBI_Entrez 3 3 89 -7.29 down 3 0 0/3 -3.645 2 70 -2.29 -5.00 Inhibitor of DNA binding 4 ID4 0.2 -5.00 down FTC FA 3 4 publication 15475448 16 24 1245 3400 ID4 inhibitor of DNA binding 4, dominant negative helix-loop-helix protein Gene_symbol_2_NCBI_Entrez 3 3 89 -7.29 down 3 0 0/3 -3.645 2 70 -2.29 -5.00 ID4 0.436363636 -2.29 down 0.01 PTC;FVPTC FA;HN 32 31 publication 15087409 16 24 1232 3422 IDI1 isopentenyl-diphosphate delta isomerase 1 Gene_symbol_2_NCBI_Entrez 1 1 63 -1.85 down 1 0 0/1 -1.85 1 63 -1.85 -1.85 IDI1 0.540145985 -1.85 down 0.01 PTC;FVPTC FA;HN 32 31 publication 15087409 13 20 888 3486 IGFBP3 insulin-like growth factor binding protein 3 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 2.8 up 2 0 2/0 2.8 1 59 2.80 2.80 M35878 M35878 Insulin-like growth factor binding protein 3 IGFBP3 up FTC FA 9 10 publication 12738736 13 20 889 3486 IGFBP3 insulin-like growth factor binding protein 3 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 2.8 up 2 0 2/0 2.8 1 59 2.80 2.80 M35878 M35878 Insulin-like growth factor binding protein 3 IGFBP3 up FTC FA 9 10 publication 12738736 18 31 1330 3486 IGFBP3 insulin-like growth factor binding protein 3 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 2.8 up 2 0 2/0 2.8 1 59 2.80 2.80 M35878 M35878 Insulin-like growth factor-binding protein-3 precursor IGFBP3 2.8 2.80 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 10 16 715 3488 IGFBP5 insulin-like growth factor binding protein 5 affy_probe_2_Entrez 1 1 14 5.96 up 1 0 1/0 5.96 1 14 5.96 5.96 38650_at 38650_at Insulin-like growth factor binding protein 5 IGFBP5 5.96 5.96 up no PTC GT 8 6 publication 15515157 13 20 947 3490 IGFBP7 insulin-like growth factor binding protein 7 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 L19182 L19182 Insulin-like growth factor binding protein 7 IGFBP7 down FTC FA 9 10 publication 12738736 15 22 1063 3491 CYR61 cysteine-rich, angiogenic inducer, 61 Gene_symbol_2_NCBI_Entrez 1 1 7 -20 down 1 0 0/1 -20 1 7 -20.00 -20.00 Cysteine-rich, angiogenic inducer, 61 CYR61 0.05 -20.00 down yes FTC FA 3 4 publication 15475448 13 20 943 3500 IGHG1 immunoglobulin heavy constant gamma 1 (G1m marker) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 Y14737 Y14737 Immunoglobulin heavy constant 3 marker IGHG3 down FTC FA 9 10 publication 12738736 13 20 948 3590 IL11RA interleukin 11 receptor, alpha clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 U32324 U32324 Interleukin 11 receptor, IL11RA down FTC FA 9 10 publication 12738736 18 31 1399 3613 IMPA2 inositol(myo)-1(or 4)-monophosphatase 2 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2 down 1 0 0/1 -2 1 59 -2.00 -2.00 AF014398 AF014398 Myo-inositol monophosphatase 2 IMPA2 2 -2.00 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1323 3662 IRF4 interferon regulatory factor 4 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 3.2 up 1 0 1/0 3.2 1 59 3.20 3.20 U52682 U52682 Human lymphocyte specific interferon regulatory factor LSIRF 3.2 3.20 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1395 3667 IRS1 insulin receptor substrate 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2 down 1 0 0/1 -2 1 59 -2.00 -2.00 S62539 S62539 Insulin receptor substrate-1 IRS-1 2 -2.00 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 945 3708 ITPR1 inositol 1,4,5-triphosphate receptor, type 1 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.5 down 2 0 0/2 -2.5 1 59 -2.50 -2.50 D26070 D26070 Inositol 1, 4, 5-triphosphate receptor, type 1 ITPR1 down FTC FA 9 10 publication 12738736 13 20 946 3708 ITPR1 inositol 1,4,5-triphosphate receptor, type 1 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.5 down 2 0 0/2 -2.5 1 59 -2.50 -2.50 D26070 D26070 Inositol 1, 4, 5-triphosphate receptor, type 1 ITPR1 down FTC FA 9 10 publication 12738736 18 31 1347 3708 ITPR1 inositol 1,4,5-triphosphate receptor, type 1 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.5 down 2 0 0/2 -2.5 1 59 -2.50 -2.50 D26070 D26070 Type 1 inositol 1,4,5-trisphosphate receptor InsP3R1 2.5 -2.50 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 966 3725 JUN v-jun sarcoma virus 17 oncogene homolog (avian) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 J04111 J04111 v-Jun avian sarcoma virus 17 oncogene homolog JUN down FTC FA 9 10 publication 12738736 18 31 1304 3783 KCNN4 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 4.9 up 1 0 1/0 4.9 1 59 4.90 4.90 AF022797 AF022797 Intermediate conductance calcium-activated potassium channel hSK4 4.9 4.90 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 16 24 1248 3815 KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog Gene_symbol_2_NCBI_Entrez 1 1 63 -3.16 down 1 0 0/1 -3.16 1 63 -3.16 -3.16 KIT 0.316666667 -3.16 down yes 0.0001 PTC;FVPTC FA;HN 32 31 publication 15087409 15 22 1057 3856 KRT8 keratin 8 Gene_symbol_2_NCBI_Entrez 1 1 7 -5 down 1 0 0/1 -5 1 7 -5.00 -5.00 Keratin 8 KRT8 0.2 -5.00 down FTC FA 3 4 publication 15475448 18 31 1310 3880 KRT19 keratin 19 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 4 up 1 0 1/0 4 1 59 4.00 4.00 Y00503 Y00503 Keratin 19 KRT19 4 4.00 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1383 3912 LAMB1 laminin, beta 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.1 down 1 0 0/1 -2.1 1 59 -2.10 -2.10 M61916 M61916 Human laminin B1 chain LAMB1 2.1 -2.10 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1313 3958 LGALS3 lectin, galactoside-binding, soluble, 3 (galectin 3) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 3.5 up 1 0 1/0 3.5 1 59 3.50 3.50 AB006780 AB006780 Galectin-3 GALBP 3.5 3.50 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 895 4015 LOX lysyl oxidase clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 2.2 up 2 0 2/0 2.2 1 59 2.20 2.20 L16895 L16895 Lysyl oxidase LOX up FTC FA 9 10 publication 12738736 18 31 1366 4015 LOX lysyl oxidase clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 2.2 up 2 0 2/0 2.2 1 59 2.20 2.20 L16895 L16895 Lysyl oxidase LOX 2.2 2.20 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1300 4038 LRP4 low density lipoprotein receptor-related protein 4 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 6.4 up 1 0 1/0 6.4 1 59 6.40 6.40 AB011540 AB011540 Similar to LDL receptor-like protein; tSXV motif MEGF7 6.4 6.40 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1296 4070 TACSTD2 tumor-associated calcium signal transducer 2 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 9.6 up 1 0 1/0 9.6 1 59 9.60 9.60 J04152 J04152 GA733-1 protein precursor TROP2 9.6 9.60 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 899 4099 MAG myelin associated glycoprotein clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 M29273 M29273 Myelin-associated glycoprotein MAG up FTC FA 9 10 publication 12738736 13 20 896 4118 MAL mal, T-cell differentiation protein clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 X76220 X76220 Mal, T-cell differentiation protein MAL up FTC FA 9 10 publication 12738736 18 31 1343 4147 MATN2 matrilin 2 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.6 down 1 0 0/1 -2.6 1 59 -2.60 -2.60 U69263 U69263 Matrilin-2 precursor MATN2 2.6 -2.60 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 621 4154 MBNL1 muscleblind-like (Drosophila) affy_probe_2_Entrez 1 1 24 2.74 up 1 0 1/0 2.74 1 24 2.74 2.74 201151_s_at 201151_s_at muscleblind-like (Drosophila) -2.74 2.74 up 0.000005 FA FTC 12 12 provided by authors 15713710 15 22 1024 4176 MCM7 MCM7 minichromosome maintenance deficient 7 (S. cerevisiae) Gene_symbol_2_NCBI_Entrez 1 1 7 3 up 1 0 1/0 3 1 7 3.00 3.00 Minichromosome maintenance deficient (S. cerevisiae)7 MCM7 3 3.00 up FTC FA 3 4 publication 15475448 15 22 1032 4212 MEIS2 Meis1, myeloid ecotropic viral integration site 1 homolog 2 (mouse) Gene_symbol_2_NCBI_Entrez 1 1 7 2 up 1 0 1/0 2 1 7 2.00 2.00 Meis (mouse) homolog 2 MEIS2 2 2.00 up FTC FA 3 4 publication 15475448 13 20 897 4233 MET met proto-oncogene (hepatocyte growth factor receptor) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 2.6 up 2 0 2/0 2.6 1 59 2.60 2.60 J02958 J02958 Met proto-oncogene (hepatocyte growth factor receptor) MET up yes FTC FA 9 10 publication 12738736 18 31 1341 4233 MET met proto-oncogene (hepatocyte growth factor receptor) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 2.6 up 2 0 2/0 2.6 1 59 2.60 2.60 J02958 J02958 MET proto-oncogene protein HGFR 2.6 2.60 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1342 4240 MFGE8 milk fat globule-EGF factor 8 protein clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.6 up 1 0 1/0 2.6 1 59 2.60 2.60 U58516 U58516 Breast epithelial antigen 46 BA46 2.6 2.60 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1297 4435 CITED1 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 7.9 up 1 0 1/0 7.9 1 59 7.90 7.90 U65092 U65092 Melanocyte-specific gene MSG1 7.9 7.90 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 10 16 723 4489 MT1A metallothionein 1A (functional) affy_probe_2_Entrez 2 2 73 -4.59 down 2 0 0/2 -2.295 2 73 -2.20 -2.39 31623_f_at 31623_f_at Metallothionein A MT1A -2.39 -2.39 down yes PTC GT 8 6 publication 15515157 18 31 1349 4489 MT1A metallothionein 1A (functional) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 73 -4.59 down 2 0 0/2 -2.295 2 73 -2.20 -2.39 K01383 K01383 Human metallothionein-I-A MT1A 2.5 -2.50 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1374 4489 MT1A metallothionein 1A (functional) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 73 -4.59 down 2 0 0/2 -2.295 2 73 -2.20 -2.39 M13485 M13485 Metallothionein I-B MT1B 2.2 -2.20 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 10 16 722 4493 MT1E metallothionein 1E (functional) affy_probe_2_Entrez 2 2 73 -4.29 down 2 0 0/2 -2.145 2 73 -2.00 -2.29 36130_f_at 36130_f_at Similar to RNA helicase-related protein MT1E -2.29 -2.29 down yes PTC GT 8 6 publication 15515157 18 31 1394 4493 MT1E metallothionein 1E (functional) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 73 -4.29 down 2 0 0/2 -2.145 2 73 -2.00 -2.29 R92331 R92331 Human metallothionein-le gene MT1E 2 -2.00 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 10 16 730 4494 MT1F metallothionein 1F (functional) affy_probe_2_Entrez 3 3 92 -5.71 down 3 0 0/3 -2.855 2 73 -2.80 -2.91 31622_f_at 31622_f_at Metallothionein 1F MT1F -2.91 -2.91 down yes PTC GT 8 6 publication 15515157 13 20 953 4494 MT1F metallothionein 1F (functional) clone_accession_2_NCBI_rna_accession_2_Entrez 3 3 92 -5.71 down 3 0 0/3 -2.855 2 73 -2.80 -2.91 M10943 M10943 Metallothionein 1 F (functional) MT1F down FTC FA 9 10 publication 12738736 18 31 1332 4494 MT1F metallothionein 1F (functional) clone_accession_2_NCBI_rna_accession_2_Entrez 3 3 92 -5.71 down 3 0 0/3 -2.855 2 73 -2.80 -2.91 M10943 M10943 Human metallothionein-lf MT1F 2.8 -2.80 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 10 16 742 4495 MT1G metallothionein 1G affy_probe_2_Entrez 2 2 73 -8.05 down 2 0 0/2 -4.025 2 73 -2.30 -5.75 926_at 926_at Metallothionein IG MT-IG -5.75 -5.75 down yes PTC GT 8 6 publication 15515157 18 31 1364 4495 MT1G metallothionein 1G clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 73 -8.05 down 2 0 0/2 -4.025 2 73 -2.30 -5.75 J03910 J03910 Metallothionein-IG MT1G 2.3 -2.30 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 10 16 726 4496 MT1H metallothionein 1H affy_probe_2_Entrez 1 1 14 -2.57 down 1 0 0/1 -2.57 1 14 -2.57 -2.57 39594_f_at 39594_f_at Metallothionein 1H MT1H -2.57 -2.57 down yes PTC GT 8 6 publication 15515157 18 31 1317 4501 MT1X metallothionein 1X clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -3.4 down 1 0 0/1 -3.4 1 59 -3.40 -3.40 AA224832 AA224832 Human metallothionein-1L MT1L 3.4 -3.40 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1309 4753 NELL2 NEL-like 2 (chicken) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 4 up 1 0 1/0 4 1 59 4.00 4.00 D83018 D83018 Neuropilin 2 NRP2 4 4.00 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 15 22 1026 4771 NF2 neurofibromin 2 (bilateral acoustic neuroma) Gene_symbol_2_NCBI_Entrez 1 1 7 3 up 1 0 1/0 3 1 7 3.00 3.00 Neurofibromin 2 NF2 3 3.00 up FTC FA 3 4 publication 15475448 9 14 653 4781 NFIB nuclear factor I/B affy_probe_2_Entrez 1 1 24 3.29 up 1 0 1/0 3.29 1 24 3.29 3.29 213032_at 213032_at Homo sapiens mRNA; cDNA DKFZp564H1916 (from clone DKFZp564H1916) -3.29 3.29 up 0.000205 FA FTC 12 12 provided by authors 15713710 13 20 956 4982 TNFRSF11B tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.4 down 2 0 0/2 -2.4 1 59 -2.40 -2.40 AB008822 AB008822 Tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin) TNFRSF11B down FTC FA 9 10 publication 12738736 18 31 1356 4982 TNFRSF11B tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.4 down 2 0 0/2 -2.4 1 59 -2.40 -2.40 AB008822 AB008822 Osteoclastogenesis inhibitory factor OCIF 2.4 -2.40 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 15 22 1045 5046 PCSK6 proprotein convertase subtilisin/kexin type 6 Gene_symbol_2_NCBI_Synonym_2_Entrez 1 1 7 -2.5 down 1 0 0/1 -2.5 1 7 -2.50 -2.50 Paired basic amino acid cleaving system 4 PACE4 0.4 -2.50 down FTC FA 3 4 publication 15475448 16 24 1220 5052 PRDX1 peroxiredoxin 1 Gene_symbol_2_NCBI_Entrez 1 1 63 -1.62 down 1 0 0/1 -1.62 1 63 -1.62 -1.62 PRDX1 0.617647059 -1.62 down 0.02 PTC;FVPTC FA;HN 32 31 publication 15087409 9 14 698 5090 PBX3 pre-B-cell leukemia transcription factor 3 affy_probe_2_Entrez 1 1 24 7.88 up 1 0 1/0 7.88 1 24 7.88 7.88 204082_at 204082_at pre-B-cell leukemia transcription factor 3 -7.88 7.88 up 0.0097 FA FTC 12 12 provided by authors 15713710 13 20 902 5127 PCTK1 PCTAIRE protein kinase 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 X66363 X66363 PCTAIRE protein kinase 1 PCTK1 up FTC FA 9 10 publication 12738736 13 20 903 5127 PCTK1 PCTAIRE protein kinase 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 X66363 X66363 PCTAIRE protein kinase 1 PTCK1 up FTC FA 9 10 publication 12738736 13 20 879 5167 ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 D12485 D12485 Ectonucleotide pyrophosphatase/phosphodiesterase 1 ENPP1 up FTC FA 9 10 publication 12738736 13 20 877 5168 ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 L35594 L35594 Ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin) ENPP2 up yes FTC FA 9 10 publication 12738736 13 20 878 5168 ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 L35594 L35594 Ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin) ENPP2 up yes FTC FA 9 10 publication 12738736 18 31 1365 5172 SLC26A4 solute carrier family 26, member 4 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.3 down 1 0 0/1 -2.3 1 59 -2.30 -2.30 AF030880 AF030880 Pedrin PDS 2.3 -2.30 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1386 5222 PGA5 pepsinogen 5, group I (pepsinogen A) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.1 down 1 0 0/1 -2.1 1 59 -2.10 -2.10 J00287 J00287 Pepsinogen PEP 2.1 -2.10 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 10 16 709 5265 SERPINA1 serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 affy_probe_2_Entrez 2 2 73 21.51 up 2 0 2/0 10.755 2 73 16.51 5.00 36781_at 36781_at Serine (or cysteine) proteinase inhibitor SERPIN-A1 16.51 16.51 up yes PTC GT 8 6 publication 15515157 18 31 1303 5265 SERPINA1 serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 73 21.51 up 2 0 2/0 10.755 2 73 16.51 5.00 X01683 X01683 Alpha 1-antitrypsin AAT 5 5.00 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1359 5270 SERPINE2 serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.3 up 1 0 1/0 2.3 1 59 2.30 2.30 AI743134 AI743134 Glial-derived nexin precursor PN-1 2.3 2.30 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 909 5315 PKM2 pyruvate kinase, muscle clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 M26252 M26252 Pyruvate kinase, muscle PKM2 up FTC FA 9 10 publication 12738736 18 31 1393 5328 PLAU plasminogen activator, urokinase clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2 up 1 0 1/0 2 1 59 2.00 2.00 X02419 X02419 Urokinase-type plasminogen activator uPA 2 2.00 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 904 5332 PLCB4 phospholipase C, beta 4 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 L41349 L41349 Phospholipase C, 4 PLCB4 up FTC FA 9 10 publication 12738736 9 14 695 5376 PMP22 peripheral myelin protein 22 affy_probe_2_Entrez 1 1 24 5.37 up 1 0 1/0 5.37 1 24 5.37 5.37 210139_s_at 210139_s_at peripheral myelin protein 22 -5.37 5.37 up 0.001508 FA FTC 12 12 provided by authors 15713710 13 20 905 5442 POLRMT polymerase (RNA) mitochondrial (DNA directed) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 U75370 U75370 Polymerase (RNA) mitochondrial (DNA directed) POLRMT up FTC FA 9 10 publication 12738736 15 22 1052 5567 PRKACB protein kinase, cAMP-dependent, catalytic, beta Gene_symbol_2_NCBI_Entrez 1 1 7 -3.33 down 1 0 0/1 -3.33 1 7 -3.33 -3.33 Protein kinase-cyclic AMP-dependent catalytic PRKACB 0.3 -3.33 down FTC FA 3 4 publication 15475448 15 22 1044 5569 PKIA protein kinase (cAMP-dependent, catalytic) inhibitor alpha Gene_symbol_2_NCBI_Entrez 1 1 7 -2.5 down 1 0 0/1 -2.5 1 7 -2.50 -2.50 Protein kinase (cyclic amp-dependent, catalytic) inhibitor PKIA 0.4 -2.50 down FTC FA 3 4 publication 15475448 9 14 631 5583 PRKCH protein kinase C, eta affy_probe_2_Entrez 1 1 24 2.98 up 1 0 1/0 2.98 1 24 2.98 2.98 218764_at 218764_at hypothetical protein MGC5363 -2.98 2.98 up 0.000271 FA FTC 12 12 provided by authors 15713710 16 24 1242 5596 MAPK4 mitogen-activated protein kinase 4 Gene_symbol_2_NCBI_Entrez 1 1 63 -2.2 down 1 0 0/1 -2.2 1 63 -2.20 -2.20 MAPK4 0.454545455 -2.20 down 0.01 PTC;FVPTC FA;HN 32 31 publication 15087409 9 14 634 5606 MAP2K3 mitogen-activated protein kinase kinase 3 affy_probe_2_Entrez 1 1 24 3.02 up 1 0 1/0 3.02 1 24 3.02 3.02 207667_s_at 207667_s_at mitogen-activated protein kinase kinase 3 -3.02 3.02 up 0.000008 FA FTC 12 12 provided by authors 15713710 10 16 737 5610 EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 affy_probe_2_Entrez 1 1 14 -4.24 down 1 0 0/1 -4.24 1 14 -4.24 -4.24 1008_f_at 1008_f_at Human interferon-inducible kinase PRKR -4.24 -4.24 down yes PTC GT 8 6 publication 15515157 13 20 907 5627 PROS1 protein S (alpha) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 3.4 up 2 0 2/0 3.4 1 59 3.40 3.40 M15036 M15036 Protein S (alpha) PROS1 up FTC FA 9 10 publication 12738736 18 31 1315 5627 PROS1 protein S (alpha) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 3.4 up 2 0 2/0 3.4 1 59 3.40 3.40 M15036 M15036 S plasma protein PROS 3.4 3.40 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 15 22 1027 5676 PSG7 pregnancy specific beta-1-glycoprotein 7 Gene_symbol_2_NCBI_Entrez 1 1 7 3 up 1 0 1/0 3 1 7 3.00 3.00 Pregnancy specific beta-1-glycoprotein 7 PSG7 3 3.00 up FTC FA 3 4 publication 15475448 9 14 679 5873 RAB27A RAB27A, member RAS oncogene family affy_probe_2_Entrez 1 1 24 3.93 up 1 0 1/0 3.93 1 24 3.93 3.93 209515_s_at 209515_s_at RAB27A, member RAS oncogene family -3.93 3.93 up 0.005235 FA FTC 12 12 provided by authors 15713710 15 22 1022 5911 RAP2A RAP2A, member of RAS oncogene family Gene_symbol_2_NCBI_Entrez 1 1 7 4 up 1 0 1/0 4 1 7 4.00 4.00 RAP2A RAP2A 4 4.00 up FTC FA 3 4 publication 15475448 13 20 910 5947 RBP1 retinol binding protein 1, cellular clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 M11433 M11433 Retinol-binding protein 1, cellular RBP1 up FTC FA 9 10 publication 12738736 9 14 644 5955 RCN2 reticulocalbin 2, EF-hand calcium binding domain affy_probe_2_Entrez 1 1 24 3.14 up 1 0 1/0 3.14 1 24 3.14 3.14 201485_s_at 201485_s_at reticulocalbin 2, EF-hand calcium binding domain -3.14 3.14 up 0.00262 FA FTC 12 12 provided by authors 15713710 18 31 1397 6004 RGS16 regulator of G-protein signalling 16 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2 down 1 0 0/1 -2 1 59 -2.00 -2.00 U70426 U70426 Homo sapiens A28-RGS14p A28-RGS14 2 -2.00 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 958 6035 RNASE1 ribonuclease, RNase A family, 1 (pancreatic) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.2 down 2 0 0/2 -2.2 1 59 -2.20 -2.20 D26129 D26129 Ribonuclease Rnase A family 1 (pancreatic) RNASE1 down FTC FA 9 10 publication 12738736 18 31 1375 6035 RNASE1 ribonuclease, RNase A family, 1 (pancreatic) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.2 down 2 0 0/2 -2.2 1 59 -2.20 -2.20 D26129 D26129 Ribonuclease A RNase A 2.2 -2.20 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 675 6310 ATXN1 ataxin 1 affy_probe_2_Entrez 1 1 24 3.83 up 1 0 1/0 3.83 1 24 3.83 3.83 203231_s_at 203231_s_at spinocerebellar ataxia 1 (olivopontocerebellar ataxia 1, autosomal dominant, ataxin 1) -3.83 3.83 up 0.000002 FA FTC 12 12 provided by authors 15713710 18 31 1392 6337 SCNN1A sodium channel, nonvoltage-gated 1 alpha clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 83 -2 even 1 1 1/1 -1 2 83 2.00 -4 X76180 X76180 Lung amiloride sensitive Nachannel ENaCa 2 2.00 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 608 6337 SCNN1A sodium channel, nonvoltage-gated 1 alpha affy_probe_2_Entrez 2 2 83 -2 even 1 1 1/1 -1 2 83 2.00 -4 203453_at 203453_at sodium channel, nonvoltage-gated 1 alpha 4 -4 down 0.006097 FA FTC 12 12 provided by authors 15713710 18 31 1354 6355 CCL8 chemokine (C-C motif) ligand 8 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.4 down 1 0 0/1 -2.4 1 59 -2.40 -2.40 Y16645 Y16645 Monocyte chemotactic protein-2 MCP-2 2.4 -2.40 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 648 6383 SDC2 syndecan 2 (heparan sulfate proteoglycan 1, cell surface-associated, fibroglycan) affy_probe_2_Entrez 1 1 24 3.81 up 1 0 1/0 3.81 1 24 3.81 3.81 212154_at 212154_at syndecan 2 (heparan sulfate proteoglycan 1, cell surface-associated, fibroglycan) -3.17 3.17 up 0.000212 FA FTC 12 12 provided by authors 15713710 9 14 673 6383 SDC2 syndecan 2 (heparan sulfate proteoglycan 1, cell surface-associated, fibroglycan) affy_probe_2_Entrez 1 1 24 3.81 up 1 0 1/0 3.81 1 24 3.81 3.81 212157_at 212157_at syndecan 2 (heparan sulfate proteoglycan 1, cell surface-associated, fibroglycan) -3.81 3.81 up 0.000043 FA FTC 12 12 provided by authors 15713710 18 31 1360 6385 SDC4 syndecan 4 (amphiglycan, ryudocan) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.3 up 1 0 1/0 2.3 1 59 2.30 2.30 D79206 D79206 Ryudocan core protein SYND4 2.3 2.30 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 959 6414 SEPP1 selenoprotein P, plasma, 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 Z11793 Z11793 Selenoprotein P, plasma 1 SEPP1 down FTC FA 9 10 publication 12738736 9 14 671 6446 SGK serum/glucocorticoid regulated kinase affy_probe_2_Entrez 1 1 24 3.74 up 1 0 1/0 3.74 1 24 3.74 3.74 201739_at 201739_at serum/glucocorticoid regulated kinase -3.74 3.74 up 0.002867 FA FTC 12 12 provided by authors 15713710 18 31 1336 6447 SGNE1 secretory granule, neuroendocrine protein 1 (7B2 protein) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.7 up 1 0 1/0 2.7 1 59 2.70 2.70 Y00757 Y00757 Polypeptide 7B2 precursor SGNE1 2.7 2.70 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 691 6503 SLA Src-like-adaptor affy_probe_2_Entrez 1 1 24 4.93 up 1 0 1/0 4.93 1 24 4.93 4.93 214977_at 214977_at Homo sapiens cDNA FLJ13790 fis, clone THYRO1000026 -4.93 4.93 up 0.004454 FA FTC 12 12 provided by authors 15713710 15 22 1037 6505 SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 Gene_symbol_2_NCBI_Entrez 1 1 7 -2 down 1 0 0/1 -2 1 7 -2.00 -2.00 Solute carrier family 1 1 SLC1A1 0.5 -2.00 down FTC FA 3 4 publication 15475448 18 31 1321 6590 SLPI secretory leukocyte protease inhibitor (antileukoproteinase) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 3.2 up 1 0 1/0 3.2 1 59 3.20 3.20 X04470 X04470 Antileukoprotease ALP 3.2 3.20 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 922 6652 SORD sorbitol dehydrogenase clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 L29254 L29254 Sorbitol dehydrogenase SORD down FTC FA 9 10 publication 12738736 13 20 911 6692 SPINT1 serine protease inhibitor, Kunitz type 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 AB000095 AB000095 Serine protease inhibitor, Kunitz type 1 SPINT1 up FTC FA 9 10 publication 12738736 18 31 1351 6696 SPP1 secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.4 up 1 0 1/0 2.4 1 59 2.40 2.40 J04765 J04765 Osteopontin precursor OPN 2.4 2.40 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 961 6722 SRF serum response factor (c-fos serum response element-binding transcription factor) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 J03161 J03161 Serum response factor (c-fos serum response element-binding transcription factor) SRF down FTC FA 9 10 publication 12738736 13 20 881 6756 SSX1 synovial sarcoma, X breakpoint 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 S79325 S79325 Fusion gene up FTC FA 9 10 publication 12738736 13 20 912 6778 STAT6 signal transducer and activator of transcription 6, interleukin-4 induced clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 U16031 U16031 Signal transducer and activator of transcription 6, interleukin-4 induced STAT6 up FTC FA 9 10 publication 12738736 18 31 1348 6834 SURF1 surfeit 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.5 down 1 0 0/1 -2.5 1 59 -2.50 -2.50 Z35093 Z35093 SURF-1 SURF1 2.5 -2.50 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 10 16 721 6925 TCF4 transcription factor 4 affy_probe_2_Entrez 2 2 38 0.59 even 1 1 1/1 0.295 2 38 2.88 -2.29 32872_at 32872_at cDNA DKFZp564I083 -2.29 -2.29 down yes PTC GT 8 6 publication 15515157 9 14 628 6925 TCF4 transcription factor 4 affy_probe_2_Entrez 2 2 38 0.59 even 1 1 1/1 0.295 2 38 2.88 -2.29 213891_s_at 213891_s_at Homo sapiens cDNA FLJ11918 fis, clone HEMBB1000272 -2.88 2.88 up 0.000001 FA FTC 12 12 provided by authors 15713710 13 20 962 6993 TCTEL1 t-complex-associated-testis-expressed 1-like 1 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.1 down 2 0 0/2 -2.1 1 59 -2.10 -2.10 D50663 D50663 T-complex-associated-testis-expressed 1-like 1 TCTEL1 down FTC FA 9 10 publication 12738736 18 31 1385 6993 TCTEL1 t-complex-associated-testis-expressed 1-like 1 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.1 down 2 0 0/2 -2.1 1 59 -2.10 -2.10 D50663 D50663 T-complex-associated-testis-expressed 1-like 1 TCTEL1 2.1 -2.10 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 964 7033 TFF3 trefoil factor 3 (intestinal) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -3.8 down 2 0 0/2 -3.8 1 59 -3.80 -3.80 AI985964 AI985964 Trefoil factor 3 (intestinal) TFF3 down FTC FA 9 10 publication 12738736 13 20 965 7033 TFF3 trefoil factor 3 (intestinal) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -3.8 down 2 0 0/2 -3.8 1 59 -3.80 -3.80 L08044 L08044 Trefoil factor 3 (intestinal) TFF3 down FTC FA 9 10 publication 12738736 18 31 1298 7033 TFF3 trefoil factor 3 (intestinal) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -3.8 down 2 0 0/2 -3.8 1 59 -3.80 -3.80 AI985964 AI985964 Intestinal Trefoil Factor, precursor TFF3 7.6 -7.60 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1311 7033 TFF3 trefoil factor 3 (intestinal) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -3.8 down 2 0 0/2 -3.8 1 59 -3.80 -3.80 L08044 L08044 Human intestinal trefoil factor TFF3 3.8 -3.80 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 15 22 1047 7037 TFRC transferrin receptor (p90, CD71) Gene_symbol_2_NCBI_Entrez 1 1 7 -2.5 down 1 0 0/1 -2.5 1 7 -2.50 -2.50 Transferrin receptor TFRC 0.4 -2.50 down FTC FA 3 4 publication 15475448 13 20 916 7039 TGFA transforming growth factor, alpha clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 3.2 up 2 0 2/0 3.2 1 59 3.20 3.20 X70340 X70340 Transforming growth factor, TGFA up FTC FA 9 10 publication 12738736 18 31 1322 7039 TGFA transforming growth factor, alpha clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 3.2 up 2 0 2/0 3.2 1 59 3.20 3.20 X70340 X70340 Transforming growth factor alpha TGFA 3.2 3.20 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 963 7048 TGFBR2 transforming growth factor, beta receptor II (70/80kDa) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.2 down 2 0 0/2 -2.2 1 59 -2.20 -2.20 D50683 D50683 Transforming growth factor, receptor II TGFBR2 down yes FTC FA 9 10 publication 12738736 18 31 1370 7048 TGFBR2 transforming growth factor, beta receptor II (70/80kDa) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.2 down 2 0 0/2 -2.2 1 59 -2.20 -2.20 D50683 D50683 Transforming growth factor-beta II receptor alpha TGF-beta IIRa 2.2 -2.20 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 10 16 711 7076 TIMP1 tissue inhibitor of metalloproteinase 1 (erythroid potentiating activity, collagenase inhibitor) affy_probe_2_Entrez 2 2 73 13.51 up 2 0 2/0 6.755 2 73 10.31 3.20 1693_s_at 1693_s_at Tissue inhibitor of metalloproteinase 1 TIMP1 10.31 10.31 up yes yes PTC GT 8 6 publication 15515157 18 31 1320 7076 TIMP1 tissue inhibitor of metalloproteinase 1 (erythroid potentiating activity, collagenase inhibitor) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 73 13.51 up 2 0 2/0 6.755 2 73 10.31 3.20 D11139 D11139 Tissue inhibitor of metalloproteinases TIMP 3.2 3.20 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1314 7122 CLDN5 claudin 5 (transmembrane protein deleted in velocardiofacial syndrome) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -3.5 down 1 0 0/1 -3.5 1 59 -3.50 -3.50 AF000959 AF000959 Deleted in Velo-Cardio-Facial Syndrome TMVCF 3.5 -3.50 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1373 7123 CLEC3B C-type lectin domain family 3, member B clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.2 down 1 0 0/1 -2.2 1 59 -2.20 -2.20 X64559 X64559 Tetranectin, a plasminogen-kringle 4 binding protein TN 2.2 -2.20 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 10 16 744 7173 TPO thyroid peroxidase affy_probe_2_Entrez 2 2 73 -10.17 down 2 0 0/2 -5.085 2 73 -2.70 -7.47 35928_at 35928_at Thyroid peroxidase TPO -7.47 -7.47 down yes PTC GT 8 6 publication 15515157 18 31 1340 7173 TPO thyroid peroxidase clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 73 -10.17 down 2 0 0/2 -5.085 2 73 -2.70 -7.47 J02969 J02969 Thyroid peroxidase TPX 2.7 -2.70 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 17 26 1263 7178 TPT1 tumor protein, translationally-controlled 1 tag_2_refseq_or_mgc_2_Entrez 1 1 2 0 down 1 0 0/1 0 0 0 0 0 TAGGTTGTCT TAGGTTGTCT down FTC FA 1 1 publication 11076659 9 14 639 7253 TSHR thyroid stimulating hormone receptor affy_probe_2_Entrez 1 1 24 3.97 up 1 0 1/0 3.97 1 24 3.97 3.97 215443_at 215443_at thyroid stimulating hormone receptor -3.09 3.09 up 0.000044 FA FTC 12 12 provided by authors 15713710 9 14 680 7253 TSHR thyroid stimulating hormone receptor affy_probe_2_Entrez 1 1 24 3.97 up 1 0 1/0 3.97 1 24 3.97 3.97 215442_s_at 215442_s_at thyroid stimulating hormone receptor -3.97 3.97 up 0.000009 FA FTC 12 12 provided by authors 15713710 10 16 710 7262 PHLDA2 pleckstrin homology-like domain, family A, member 2 affy_probe_2_Entrez 2 2 73 18.46 up 2 0 2/0 9.23 2 73 15.96 2.50 31888_s_at 31888_s_at Tumor-suppressing subtransferable candidate 3 TSSC3 15.96 15.96 up yes yes PTC GT 8 6 publication 15515157 18 31 1344 7262 PHLDA2 pleckstrin homology-like domain, family A, member 2 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 73 18.46 up 2 0 2/0 9.23 2 73 15.96 2.50 AF001294 AF001294 Imprinted in Placenta and Liver IPL 2.5 2.50 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 939 7290 HIRA HIR histone cell cycle regulation defective homolog A (S. cerevisiae) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 X89887 X89887 Histone cell cycle regulation-defective homolog A HIRA down FTC FA 9 10 publication 12738736 18 31 1326 7301 TYRO3 TYRO3 protein tyrosine kinase clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.1 up 1 0 1/0 2.1 1 59 2.10 2.10 D17517 D17517 Sky RSE 3 3.00 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1378 7301 TYRO3 TYRO3 protein tyrosine kinase clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.1 up 1 0 1/0 2.1 1 59 2.10 2.10 U18934 U18934 DTK receptor tyrosine kinase DTK 2.1 2.10 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 610 7306 TYRP1 tyrosinase-related protein 1 affy_probe_2_Entrez 1 1 24 -3.62 down 1 0 0/1 -3.62 1 24 -3.62 -3.62 205694_at 205694_at tyrosinase-related protein 1 3.62 -3.62 down 0.000555 FA FTC 12 12 provided by authors 15713710 15 22 1042 7335 UBE2V1 ubiquitin-conjugating enzyme E2 variant 1 Gene_symbol_2_NCBI_Entrez 1 1 7 -2.5 down 1 0 0/1 -2.5 1 7 -2.50 -2.50 Ubiquitin-conjugating enzyme E2 variant 1 UBE2V1 0.4 -2.50 down FTC FA 3 4 publication 15475448 15 22 1062 7356 SCGB1A1 secretoglobin, family 1A, member 1 (uteroglobin) Gene_symbol_2_NCBI_Entrez 1 1 7 -10 down 1 0 0/1 -10 1 7 -10.00 -10.00 Secretoglobin SCGB1A1 0.1 -10.00 down FTC FA 3 4 publication 15475448 15 22 1049 7422 VEGF vascular endothelial growth factor Gene_symbol_2_NCBI_Entrez 1 1 7 -3.33 down 1 0 0/1 -3.33 1 7 -3.33 -3.33 Vascular endothelial growth factor VEGF 0.3 -3.33 down FTC FA 3 4 publication 15475448 16 24 1229 7507 XPA xeroderma pigmentosum, complementation group A Gene_symbol_2_NCBI_Entrez 1 1 63 -1.75 down 1 0 0/1 -1.75 1 63 -1.75 -1.75 XPA 0.572052402 -1.75 down 0.01 PTC;FVPTC FA;HN 32 31 publication 15087409 15 22 1054 7543 ZFX zinc finger protein, X-linked Gene_symbol_2_NCBI_Entrez 1 1 7 -3.33 down 1 0 0/1 -3.33 1 7 -3.33 -3.33 Zinc finger protein, X-linked ZFX 0.3 -3.33 down FTC FA 3 4 publication 15475448 13 20 921 7644 ZNF91 zinc finger protein 91 (HPF7, HTF10) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 L11672 L11672 Zinc finger protein 91 (HPF7, HTF10) ZNF91 up FTC FA 9 10 publication 12738736 10 16 729 7707 ZNF148 zinc finger protein 148 (pHZ-52) affy_probe_2_Entrez 1 1 14 -9.07 down 1 0 0/1 -9.07 1 14 -9.07 -9.07 41465_at 41465_at Zinc finger protein 148 (pHZ-52) ZNF148 -2.9 -2.90 down yes PTC GT 8 6 publication 15515157 10 16 745 7707 ZNF148 zinc finger protein 148 (pHZ-52) affy_probe_2_Entrez 1 1 14 -9.07 down 1 0 0/1 -9.07 1 14 -9.07 -9.07 41466_s_at 41466_s_at Zinc finger protein 148 (pHZ-52) ZNF148 -9.07 -9.07 down yes PTC GT 8 6 publication 15515157 15 22 1031 7874 USP7 ubiquitin specific protease 7 (herpes virus-associated) Gene_symbol_2_NCBI_Entrez 1 1 7 2 up 1 0 1/0 2 1 7 2.00 2.00 Ubiquitin specific protease 7 USP7 2 2.00 up FTC FA 3 4 publication 15475448 9 14 696 7881 KCNAB1 potassium voltage-gated channel, shaker-related subfamily, beta member 1 affy_probe_2_Entrez 1 1 24 6.61 up 1 0 1/0 6.61 1 24 6.61 6.61 210471_s_at 210471_s_at potassium voltage-gated channel, shaker-related subfamily, beta member 1 -5.48 5.48 up 0.000312 FA FTC 12 12 provided by authors 15713710 9 14 697 7881 KCNAB1 potassium voltage-gated channel, shaker-related subfamily, beta member 1 affy_probe_2_Entrez 1 1 24 6.61 up 1 0 1/0 6.61 1 24 6.61 6.61 210078_s_at 210078_s_at potassium voltage-gated channel, shaker-related subfamily, beta member 1 -6.61 6.61 up 0.000095 FA FTC 12 12 provided by authors 15713710 13 20 940 7922 SLC39A7 solute carrier family 39 (zinc transporter), member 7 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 AL031228 AL031228 HLA class II region-expressed gene KE4 HKE4 down FTC FA 9 10 publication 12738736 10 16 736 8364 HIST1H4C histone 1, H4c affy_probe_2_Entrez 1 1 14 -4.22 down 1 0 0/1 -4.22 1 14 -4.22 -4.22 39969_at 39969_at H4 histone family, member G H4FG -4.22 -4.22 down yes PTC GT 8 6 publication 15515157 9 14 661 8418 CMAH cytidine monophosphate-N-acetylneuraminic acid hydroxylase (CMP-N-acetylneuraminate monooxygenase) affy_probe_2_Entrez 1 1 24 3.49 up 1 0 1/0 3.49 1 24 3.49 3.49 205518_s_at 205518_s_at cytidine monophosphate-N-acetylneuraminic acid hydroxylase (CMP-N-acetylneuraminate monooxygenase) -3.49 3.49 up 0.003132 FA FTC 12 12 provided by authors 15713710 9 14 635 8490 RGS5 regulator of G-protein signalling 5 affy_probe_2_Entrez 1 1 24 3.03 up 1 0 1/0 3.03 1 24 3.03 3.03 209071_s_at 209071_s_at regulator of G-protein signalling 5 -3.03 3.03 up 0.000001 FA FTC 12 12 provided by authors 15713710 10 16 717 8560 DEGS1 degenerative spermatocyte homolog 1, lipid desaturase (Drosophila) affy_probe_2_Entrez 1 1 14 5.24 up 1 0 1/0 5.24 1 14 5.24 5.24 33337_at 33337_at Degenerative spermatocyte lipid desaturase DEGS 5.24 5.24 up yes PTC GT 8 6 publication 15515157 16 24 1210 8562 DENR density-regulated protein Gene_symbol_2_NCBI_Entrez 1 1 63 -1.51 down 1 0 0/1 -1.51 1 63 -1.51 -1.51 DENR 0.662337662 -1.51 down 0.02 PTC;FVPTC FA;HN 32 31 publication 15087409 9 14 652 8613 PPAP2B phosphatidic acid phosphatase type 2B affy_probe_2_Entrez 1 1 24 4.46 up 1 0 1/0 4.46 1 24 4.46 4.46 212230_at 212230_at phosphatidic acid phosphatase type 2B -3.28 3.28 up 0.000001 FA FTC 12 12 provided by authors 15713710 9 14 678 8613 PPAP2B phosphatidic acid phosphatase type 2B affy_probe_2_Entrez 1 1 24 4.46 up 1 0 1/0 4.46 1 24 4.46 4.46 212226_s_at 212226_s_at phosphatidic acid phosphatase type 2B -3.91 3.91 up 0 FA FTC 12 12 provided by authors 15713710 9 14 688 8613 PPAP2B phosphatidic acid phosphatase type 2B affy_probe_2_Entrez 1 1 24 4.46 up 1 0 1/0 4.46 1 24 4.46 4.46 209355_s_at 209355_s_at phosphatidic acid phosphatase type 2B -4.46 4.46 up 0.000001 FA FTC 12 12 provided by authors 15713710 16 24 1247 8630 HSD17B6 hydroxysteroid (17-beta) dehydrogenase 6 Gene_symbol_2_NCBI_Synonym_2_Entrez 2 2 122 -5.82 down 2 0 0/2 -2.91 2 122 -2.80 -3.02 RODH 0.330882353 -3.02 down 0.01 PTC;FVPTC FA;HN 32 31 publication 15087409 18 31 1331 8630 HSD17B6 hydroxysteroid (17-beta) dehydrogenase 6 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 122 -5.82 down 2 0 0/2 -2.91 2 122 -2.80 -3.02 U89281 U89281 Oxidative 3 alpha hydroxysteroid dehydrogenase RODH 2.8 -2.80 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 10 16 733 8857 FCGBP Fc fragment of IgG binding protein affy_probe_2_Entrez 3 3 92 -6.32 down 3 0 0/3 -3.16 2 73 -3.10 -3.22 39014_at 39014_at Fc fragment of IgG binding protein FCGBP -3.22 -3.22 down yes PTC GT 8 6 publication 15515157 13 20 931 8857 FCGBP Fc fragment of IgG binding protein clone_accession_2_NCBI_rna_accession_2_Entrez 3 3 92 -6.32 down 3 0 0/3 -3.16 2 73 -3.10 -3.22 D84239 D84239 Fc fragment of IgG binding protein FCGBP down FTC FA 9 10 publication 12738736 18 31 1325 8857 FCGBP Fc fragment of IgG binding protein clone_accession_2_NCBI_rna_accession_2_Entrez 3 3 92 -6.32 down 3 0 0/3 -3.16 2 73 -3.10 -3.22 D84239 D84239 IgG Fc binding protein FC(GAMMA)BP 3.1 -3.10 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1400 8892 EIF2B2 eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2 down 1 0 0/1 -2 1 59 -2.00 -2.00 AF035280 AF035280 Translation initiation factor eIF-2B beta subunit EIF2B2 2 -2.00 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 930 8939 FUBP3 far upstream element (FUSE) binding protein 3 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 U69127 U69127 Far upstream element (FUSE) binding protein 3 FUBP3 down FTC FA 9 10 publication 12738736 10 16 738 8942 KYNU kynureninase (L-kynurenine hydrolase) affy_probe_2_Entrez 1 1 14 -4.29 down 1 0 0/1 -4.29 1 14 -4.29 -4.29 38492_at 38492_at Kynureninase (L-kynurenine hydrolase) KYNU -4.29 -4.29 down yes PTC GT 8 6 publication 15515157 15 22 1055 8991 SELENBP1 selenium binding protein 1 Gene_symbol_2_NCBI_Entrez 2 2 66 -5.43 down 2 0 0/2 -2.715 2 66 -2.10 -3.33 Selenium binding protein 1 SELENBP1 0.3 -3.33 down FTC FA 3 4 publication 15475448 18 31 1387 8991 SELENBP1 selenium binding protein 1 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 66 -5.43 down 2 0 0/2 -2.715 2 66 -2.10 -3.33 U29091 U29091 Human selenium-binding protein HSBP 2.1 -2.10 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 16 24 1204 9144 SYNGR2 synaptogyrin 2 Gene_symbol_2_NCBI_Entrez 1 1 63 2.49 up 1 0 1/0 2.49 1 63 2.49 2.49 SYNGR2 2.493333333 2.49 up yes 0.01 PTC;FVPTC FA;HN 32 31 publication 15087409 10 16 718 9168 TMSB10 thymosin, beta 10 affy_probe_2_Entrez 1 1 14 5.09 up 1 0 1/0 5.09 1 14 5.09 5.09 31481_s_at 31481_s_at Thymosin, beta 10 TMSB10 5.09 5.09 up yes PTC GT 8 6 publication 15515157 16 24 1241 9352 TXNL1 thioredoxin-like 1 Gene_symbol_2_NCBI_Synonym_2_Entrez 1 1 63 -2.09 down 1 0 0/1 -2.09 1 63 -2.09 -2.09 TXNL 0.478991597 -2.09 down 0.01 PTC;FVPTC FA;HN 32 31 publication 15087409 9 14 627 9411 ARHGAP29 Rho GTPase activating protein 29 affy_probe_2_Entrez 1 1 24 2.86 up 1 0 1/0 2.86 1 24 2.86 2.86 203910_at 203910_at PTPL1-associated RhoGAP 1 -2.86 2.86 up 0.000011 FA FTC 12 12 provided by authors 15713710 13 20 935 9413 C9orf61 chromosome 9 open reading frame 61 clone_accession_2_NCBI_rna_accession_2_Entrez 3 3 102 1.32 down 2 1 1/2 0.66 2 83 3.42 -2.10 L27479 L27479 Friedriech ataxia region gene X123 X123 down FTC FA 9 10 publication 12738736 18 31 1382 9413 C9orf61 chromosome 9 open reading frame 61 clone_accession_2_NCBI_rna_accession_2_Entrez 3 3 102 1.32 down 2 1 1/2 0.66 2 83 3.42 -2.10 L27479 L27479 Human X123 X123 2.1 -2.10 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 658 9413 C9orf61 chromosome 9 open reading frame 61 affy_probe_2_Entrez 3 3 102 1.32 down 2 1 1/2 0.66 2 83 3.42 -2.10 213900_at 213900_at Friedreich ataxia region gene X123 -3.42 3.42 up 0.000211 FA FTC 12 12 provided by authors 15713710 18 31 1391 9435 CHST2 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2 up 1 0 1/0 2 1 59 2.00 2.00 AB014679 AB014679 N-acetylglucosamine-6-O-sulfotransferas e GN6ST 2 2.00 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 15 22 1035 9451 EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 Gene_symbol_2_NCBI_Entrez 1 1 7 -2 down 1 0 0/1 -2 1 7 -2.00 -2.00 Eukaryotic translation initiation factor 2 alpha kinase 3 EIF2AK3 0.5 -2.00 down FTC FA 3 4 publication 15475448 9 14 669 9452 ITM2A integral membrane protein 2A affy_probe_2_Entrez 1 1 24 3.72 up 1 0 1/0 3.72 1 24 3.72 3.72 202746_at 202746_at integral membrane protein 2A -3.72 3.72 up 0.000192 FA FTC 12 12 provided by authors 15713710 9 14 605 9518 GDF15 growth differentiation factor 15 affy_probe_2_Entrez 1 1 24 -7.86 down 1 0 0/1 -7.86 1 24 -7.86 -7.86 221577_x_at 221577_x_at prostate differentiation factor 7.86 -7.86 down 0.003934 FA FTC 12 12 provided by authors 15713710 18 31 1318 9568 GPR51 G protein-coupled receptor 51 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 3.3 up 1 0 1/0 3.3 1 59 3.30 3.30 AF056085 AF056085 G protein-coupled receptor GABABR2 3.3 3.30 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 17 26 1262 9607 CART cocaine- and amphetamine-regulated transcript tag_2_refseq_or_mgc_2_Entrez 1 1 2 0 up 1 0 1/0 0 0 0 0 0 TGTGACGCCG TGTGACGCCG up FTC FA 1 1 publication 11076659 18 31 1389 9697 TRAM2 translocation associated membrane protein 2 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.1 down 1 0 0/1 -2.1 1 59 -2.10 -2.10 D31762 D31762 LIM protein SLIMMER mRNA KIAA0057 2.1 -2.10 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 892 9746 CLSTN3 calsyntenin 3 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 AB018269 AB018269 KIAA0726 gene product KIAA0726 up FTC FA 9 10 publication 12738736 9 14 629 9749 PHACTR2 phosphatase and actin regulator 2 affy_probe_2_Entrez 1 1 24 3.16 up 1 0 1/0 3.16 1 24 3.16 3.16 204049_s_at 204049_s_at KIAA0680 gene product -2.89 2.89 up 0.000036 FA FTC 12 12 provided by authors 15713710 9 14 646 9749 PHACTR2 phosphatase and actin regulator 2 affy_probe_2_Entrez 1 1 24 3.16 up 1 0 1/0 3.16 1 24 3.16 3.16 204048_s_at 204048_s_at KIAA0680 gene product -3.16 3.16 up 0.000045 FA FTC 12 12 provided by authors 15713710 9 14 686 9774 BCLAF1 BCL2-associated transcription factor 1 affy_probe_2_Entrez 1 1 24 4.34 up 1 0 1/0 4.34 1 24 4.34 4.34 214499_s_at 214499_s_at Bcl-2-associated transcription factor -4.34 4.34 up 0.000008 FA FTC 12 12 provided by authors 15713710 13 20 929 9844 ELMO1 engulfment and cell motility 1 (ced-12 homolog, C. elegans) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.3 down 2 0 0/2 -2.3 1 59 -2.30 -2.30 D87457 D87457 Engulfment and cell motility 1 ELMO1 down FTC FA 9 10 publication 12738736 18 31 1362 9844 ELMO1 engulfment and cell motility 1 (ced-12 homolog, C. elegans) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 -2.3 down 2 0 0/2 -2.3 1 59 -2.30 -2.30 D87457 D87457 KIAA0281 gene KIAA0281 2.3 -2.30 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 914 9969 THRAP1 thyroid hormone receptor associated protein 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 AB011165 AB011165 Thyroid hormone receptor-associated protein 240kDa subunit TRAP240 up FTC FA 9 10 publication 12738736 9 14 614 10105 PPIF peptidylprolyl isomerase F (cyclophilin F) affy_probe_2_Entrez 1 1 24 -3.02 down 1 0 0/1 -3.02 1 24 -3.02 -3.02 201489_at 201489_at peptidylprolyl isomerase F (cyclophilin F) 3.02 -3.02 down 0.002756 FA FTC 12 12 provided by authors 15713710 13 20 906 10135 PBEF1 pre-B-cell colony enhancing factor 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 U02020 U02020 Pre-B-cell colony-enhancing factor PBEF up FTC FA 9 10 publication 12738736 16 24 1238 10144 FAM13A1 family with sequence similarity 13, member A1 Gene_symbol_2_NCBI_Entrez 1 1 63 -1.9 down 1 0 0/1 -1.9 1 63 -1.90 -1.90 FAM13A1 0.525925926 -1.90 down yes 0.02 PTC;FVPTC FA;HN 32 31 publication 15087409 18 31 1334 10154 PLXNC1 plexin C1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.7 up 1 0 1/0 2.7 1 59 2.70 2.70 AF030339 AF030339 Viral encoded semaphorin protein receptor PLXN-C1 2.7 2.70 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 16 24 1225 10282 BET1 BET1 homolog (S. cerevisiae) Gene_symbol_2_NCBI_Entrez 1 1 63 -1.68 down 1 0 0/1 -1.68 1 63 -1.68 -1.68 BET1 0.594202899 -1.68 down 0.04 PTC;FVPTC FA;HN 32 31 publication 15087409 18 31 1327 10404 PGCP plasma glutamate carboxypeptidase clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 83 0.63 even 1 1 1/1 0.315 2 83 3.53 -2.90 W28330 W28330 Plasma glutamate carboxypeptidase PGCP 2.9 -2.90 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 654 10404 PGCP plasma glutamate carboxypeptidase affy_probe_2_Entrez 2 2 83 0.63 even 1 1 1/1 0.315 2 83 3.53 -2.90 208454_s_at 208454_s_at plasma glutamate carboxypeptidase -3.29 3.29 up 0.000093 FA FTC 12 12 provided by authors 15713710 9 14 663 10404 PGCP plasma glutamate carboxypeptidase affy_probe_2_Entrez 2 2 83 0.63 even 1 1 1/1 0.315 2 83 3.53 -2.90 203501_at 203501_at plasma glutamate carboxypeptidase -3.53 3.53 up 0.000657 FA FTC 12 12 provided by authors 15713710 13 20 890 10437 IFI30 interferon, gamma-inducible protein 30 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 J03909 J03909 IFN, inducible protein 30 IFI30 up FTC FA 9 10 publication 12738736 13 20 891 10437 IFI30 interferon, gamma-inducible protein 30 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 J03909 J03909 Interferon, gamma-inducible protein 30 IFI30 up FTC FA 9 10 publication 12738736 18 31 1306 10439 OLFM1 olfactomedin 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 4.7 up 1 0 1/0 4.7 1 59 4.70 4.70 U79299 U79299 Neuronal olfactomedin-related ER localized protein NOE1 4.7 4.70 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 632 10492 SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein affy_probe_2_Entrez 1 1 24 2.98 up 1 0 1/0 2.98 1 24 2.98 2.98 209025_s_at 209025_s_at NS1-associated protein 1 -2.98 2.98 up 0.000001 FA FTC 12 12 provided by authors 15713710 13 20 934 10516 FBLN5 fibulin 5 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 AF093118 AF093118 Fibulin 5 FBLN5 down FTC FA 9 10 publication 12738736 13 20 960 10558 SPTLC1 serine palmitoyltransferase, long chain base subunit 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 Y08685 Y08685 Serine palmitoyltransferase, long chain base subunit 1 SPTLC1 down FTC FA 9 10 publication 12738736 13 20 871 10602 CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 AF094521 AF094521 Cdc42 effector protein 3 CEP3 up FTC FA 9 10 publication 12738736 13 20 883 10616 C20orf18 chromosome 20 open reading frame 18 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 AA160708 AA160708 HBV-associated factor XAP4 up FTC FA 9 10 publication 12738736 13 20 917 10695 TNRC5 trinucleotide repeat containing 5 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 U80744 U80744 Trinucleotide repeat containing 5 TNRC5 up FTC FA 9 10 publication 12738736 15 22 1033 10769 PLK2 polo-like kinase 2 (Drosophila) Gene_symbol_2_NCBI_Synonym_2_Entrez 1 1 7 -2 down 1 0 0/1 -2 1 7 -2.00 -2.00 Serum-inducible SNK 0.5 -2.00 down FTC FA 3 4 publication 15475448 13 20 898 10797 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 X16396 X16396 Methylene tetrahydrofolate dehydrogenase (NADdependent), methenyltetrahydrofolate cyclohydrolase MTHFD2 up FTC FA 9 10 publication 12738736 15 22 1056 10989 IMMT inner membrane protein, mitochondrial (mitofilin) Gene_symbol_2_NCBI_Entrez 1 1 7 -5 down 1 0 0/1 -5 1 7 -5.00 -5.00 Inner membrane protein, mitochondrial IMMT 0.2 -5.00 down FTC FA 3 4 publication 15475448 10 16 727 11039 SMA4 SMA4 affy_probe_2_Entrez 1 1 14 -2.74 down 1 0 0/1 -2.74 1 14 -2.74 -2.74 32921_at 32921_at SMA4 SMA4 -2.74 -2.74 down yes PTC GT 8 6 publication 15515157 13 20 954 11072 DUSP14 dual specificity phosphatase 14 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 AF038844 AF038844 MKP-1 like protein kinase phosphatase MKP-L down FTC FA 9 10 publication 12738736 13 20 918 11170 TU3A TU3A protein clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 AF035283 AF035283 TU3A protein TU3A up FTC FA 9 10 publication 12738736 16 24 1221 11183 MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 Gene_symbol_2_NCBI_Entrez 1 1 63 -1.64 down 1 0 0/1 -1.64 1 63 -1.64 -1.64 MAP4K5 0.610062893 -1.64 down 0.04 PTC;FVPTC FA;HN 32 31 publication 15087409 13 20 955 22795 NID2 nidogen 2 (osteonidogen) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 D86425 D86425 Nidogen 2 NID2 down FTC FA 9 10 publication 12738736 13 20 863 22809 ATF5 activating transcription factor 5 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 AB021663 AB021663 Activating transcription factor 5 ATF5 up FTC FA 9 10 publication 12738736 9 14 637 22882 ZHX2 zinc fingers and homeoboxes 2 affy_probe_2_Entrez 1 1 24 3.09 up 1 0 1/0 3.09 1 24 3.09 3.09 203556_at 203556_at KIAA0854 protein -3.09 3.09 up 0.000038 FA FTC 12 12 provided by authors 15713710 13 20 894 22885 ABLIM3 actin binding LIM protein family, member 3 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 AB020650 AB020650 KIAA0843 protein KIAA0843 up FTC FA 9 10 publication 12738736 9 14 623 22902 RIPX rap2 interacting protein x affy_probe_2_Entrez 1 1 24 2.8 up 1 0 1/0 2.8 1 24 2.8 2.8 213939_s_at 213939_s_at KIAA0871 protein -2.8 2.8 up 0.000288 FA FTC 12 12 provided by authors 15713710 18 31 1369 23007 PLCL3 phospholipase C-like 3 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.2 down 1 0 0/1 -2.2 1 59 -2.20 -2.20 AB028992 AB028992 KIAA1069 protein KIAA1069 2.2 -2.20 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 901 23089 PEG10 paternally expressed 10 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 2.4 up 2 0 2/0 2.4 1 59 2.40 2.40 AB028974 AB028974 Paternally expressed 10 PEG10 up FTC FA 9 10 publication 12738736 18 31 1350 23089 PEG10 paternally expressed 10 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 78 2.4 up 2 0 2/0 2.4 1 59 2.40 2.40 AB028974 AB028974 KIAA1051 protein KIAA1051 2.4 2.40 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 690 23150 FRMD4B FERM domain containing 4B affy_probe_2_Entrez 1 1 24 4.66 up 1 0 1/0 4.66 1 24 4.66 4.66 213056_at 213056_at KIAA1013 protein -4.66 4.66 up 0.002559 FA FTC 12 12 provided by authors 15713710 16 24 1235 23171 GPD1L glycerol-3-phosphate dehydrogenase 1-like Gene_symbol_2_NCBI_Synonym_2_Entrez 1 1 63 -1.88 down 1 0 0/1 -1.88 1 63 -1.88 -1.88 KIAA0089 0.531468531 -1.88 down 0.03 PTC;FVPTC FA;HN 32 31 publication 15087409 13 20 949 23180 RAFTLIN raft-linking protein clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 43 3.27 even 1 1 1/1 3.27 1 24 3.27 3.27 D42043 D42043 KIAA0084 protein KIAA0084 down FTC FA 9 10 publication 12738736 9 14 650 23180 RAFTLIN raft-linking protein affy_probe_2_Entrez 2 2 43 3.27 even 1 1 1/1 3.27 1 24 3.27 3.27 212646_at 212646_at KIAA0084 protein -3.27 3.27 up 0.000001 FA FTC 12 12 provided by authors 15713710 18 31 1380 23231 KIAA0746 KIAA0746 protein clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.1 up 1 0 1/0 2.1 1 59 2.10 2.10 AB018289 AB018289 KIAA0746 protein KIAA0746 2.1 2.10 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 641 23250 ATP11A ATPase, Class VI, type 11A affy_probe_2_Entrez 1 1 24 3.12 up 1 0 1/0 3.12 1 24 3.12 3.12 213582_at 213582_at ATPase, Class VI, type 11A -3.12 3.12 up 0.004345 FA FTC 12 12 provided by authors 15713710 16 24 1217 23272 RAP140 retinoblastoma-associated protein 140 Gene_symbol_2_NCBI_Entrez 1 1 63 -1.6 down 1 0 0/1 -1.6 1 63 -1.60 -1.60 RAP140 0.625 -1.60 down 0.01 PTC;FVPTC FA;HN 32 31 publication 15087409 18 31 1368 23348 DOCK9 dedicator of cytokinesis 9 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.2 up 1 0 1/0 2.2 1 59 2.20 2.20 AB028981 AB028981 KIAA1058 protein KIAA1058 2.2 2.20 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 18 31 1335 23362 PSD3 pleckstrin and Sec7 domain containing 3 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 2.7 up 1 0 1/0 2.7 1 59 2.70 2.70 AB023159 AB023159 KIAA0942 protein KIAA0942 2.7 2.70 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 893 23367 LARP1 La ribonucleoprotein domain family, member 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 AB018274 AB018274 KIAA0731 protein KIAA0731 up FTC FA 9 10 publication 12738736 9 14 617 23469 PHF3 PHD finger protein 3 affy_probe_2_Entrez 1 1 24 2.68 up 1 0 1/0 2.68 1 24 2.68 2.68 215718_s_at 215718_s_at PHD finger protein 3 -2.68 2.68 up 0.000017 FA FTC 12 12 provided by authors 15713710 16 24 1243 23516 SLC39A14 solute carrier family 39 (zinc transporter), member 14 Gene_symbol_2_NCBI_Synonym_2_Entrez 2 2 122 -4.24 down 2 0 0/2 -2.12 2 122 -2.00 -2.24 KIAA0062 0.446601942 -2.24 down 0.001 PTC;FVPTC FA;HN 32 31 publication 15087409 18 31 1398 23516 SLC39A14 solute carrier family 39 (zinc transporter), member 14 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 122 -4.24 down 2 0 0/2 -2.12 2 122 -2.00 -2.24 D31887 D31887 KIAA0062 gene KIAA0062 2 -2.00 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 15 22 1030 23544 SEZ6L seizure related 6 homolog (mouse)-like Gene_symbol_2_NCBI_Entrez 1 1 7 2 up 1 0 1/0 2 1 7 2.00 2.00 Seizure related gene 6 (mouse)-like SEZ6L 2 2.00 up FTC FA 3 4 publication 15475448 9 14 664 23635 SSBP2 single-stranded DNA binding protein 2 affy_probe_2_Entrez 1 1 24 3.61 up 1 0 1/0 3.61 1 24 3.61 3.61 210829_s_at 210829_s_at single-stranded DNA binding protein 2 -3.61 3.61 up 0.009525 FA FTC 12 12 provided by authors 15713710 13 20 913 23646 PLD3 phospholipase D family, member 3 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 U60644 U60644 Similar to vaccinia virus HindIII K4L ORF HU_K4 up FTC FA 9 10 publication 12738736 13 20 941 23673 STX12 syntaxin 12 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 AL035306 AL035306 Hypothetical protein MGC14797 MCG14797 down FTC FA 9 10 publication 12738736 9 14 625 23741 CRI1 CREBBP/EP300 inhibitor 1 affy_probe_2_Entrez 1 1 24 2.84 up 1 0 1/0 2.84 1 24 2.84 2.84 208670_s_at 208670_s_at CREBBP/EP300 inhibitory protein 1 -2.84 2.84 up 0.000004 FA FTC 12 12 provided by authors 15713710 15 22 1021 25797 QPCT glutaminyl-peptide cyclotransferase (glutaminyl cyclase) Gene_symbol_2_NCBI_Entrez 2 2 66 7.4 up 2 0 2/0 3.7 2 66 4.00 3.40 Glutaminyl-peptide cyclotransferase QPCT 4 4.00 up FTC FA 3 4 publication 15475448 18 31 1316 25797 QPCT glutaminyl-peptide cyclotransferase (glutaminyl cyclase) clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 66 7.4 up 2 0 2/0 3.7 2 66 4.00 3.40 X71125 X71125 Glutamine cyclotransferase GCT 3.4 3.40 up FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 13 20 957 25807 C22orf3 chromosome 22 open reading frame 3 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 AL031186 AL031186 Putative emu1 LOC129080 down FTC FA 9 10 publication 12738736 13 20 927 26130 GAPVD1 GTPase activating protein and VPS9 domains 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 AL080196 AL080196 DKFZP434C212 protein DKFZP434C212 down FTC FA 9 10 publication 12738736 9 14 607 26471 P8 p8 protein (candidate of metastasis 1) affy_probe_2_Entrez 1 1 24 -4.44 down 1 0 0/1 -4.44 1 24 -4.44 -4.44 209230_s_at 209230_s_at p8 protein (candidate of metastasis 1) 4.44 -4.44 down 0.001643 FA FTC 12 12 provided by authors 15713710 9 14 687 27161 EIF2C2 eukaryotic translation initiation factor 2C, 2 affy_probe_2_Entrez 1 1 24 4.34 up 1 0 1/0 4.34 1 24 4.34 4.34 222294_s_at 222294_s_at ESTs -4.34 4.34 up 0.002698 FA FTC 12 12 provided by authors 15713710 13 20 952 27258 LSM3 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 N98670 N98670 LSM 3 protein LSM3 down FTC FA 9 10 publication 12738736 9 14 611 27333 GOLPH4 golgi phosphoprotein 4 affy_probe_2_Entrez 1 1 24 -3.53 down 1 0 0/1 -3.53 1 24 -3.53 -3.53 204324_s_at 204324_s_at golgi phosphoprotein 4 3.53 -3.53 down 0.000843 FA FTC 12 12 provided by authors 15713710 13 20 920 27338 UBE2S ubiquitin-conjugating enzyme E2S clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 M91670 M91670 Ubiquitin carrier protein E2-EPF up FTC FA 9 10 publication 12738736 9 14 626 30008 EFEMP2 EGF-containing fibulin-like extracellular matrix protein 2 affy_probe_2_Entrez 1 1 24 2.86 up 1 0 1/0 2.86 1 24 2.86 2.86 209356_x_at 209356_x_at EGF-containing fibulin-like extracellular matrix protein 2 -2.86 2.86 up 0.000001 FA FTC 12 12 provided by authors 15713710 9 14 674 50506 DUOX2 dual oxidase 2 affy_probe_2_Entrez 1 1 24 3.82 up 1 0 1/0 3.82 1 24 3.82 3.82 219727_at 219727_at dual oxidase 2 -3.82 3.82 up 0.003596 FA FTC 12 12 provided by authors 15713710 9 14 662 51196 PLCE1 phospholipase C, epsilon 1 affy_probe_2_Entrez 1 1 24 3.5 up 1 0 1/0 3.5 1 24 3.5 3.5 205111_s_at 205111_s_at phospholipase C, epsilon 1 -3.5 3.5 up 0.004579 FA FTC 12 12 provided by authors 15713710 16 24 1226 51340 CRNKL1 Crn, crooked neck-like 1 (Drosophila) Gene_symbol_2_NCBI_Entrez 1 1 63 -1.68 down 1 0 0/1 -1.68 1 63 -1.68 -1.68 CRNKL1 0.593984962 -1.68 down 0.01 PTC;FVPTC FA;HN 32 31 publication 15087409 16 24 1231 51382 ATP6V1D ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D Gene_symbol_2_NCBI_Entrez 1 1 63 -1.82 down 1 0 0/1 -1.82 1 63 -1.82 -1.82 ATP6V1D 0.549707602 -1.82 down 0.01 PTC;FVPTC FA;HN 32 31 publication 15087409 15 22 1028 51440 HPCAL4 hippocalcin like 4 Gene_symbol_2_NCBI_Entrez 1 1 7 3 up 1 0 1/0 3 1 7 3.00 3.00 Hippocalcin-like protein 4 HPCAL4 3 3.00 up FTC FA 3 4 publication 15475448 13 20 872 51454 GULP1 GULP, engulfment adaptor PTB domain containing 1 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 AL080142 AL080142 CED-6 protein CED-6 up FTC FA 9 10 publication 12738736 16 24 1233 51690 LSM7 LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) Gene_symbol_2_NCBI_Entrez 1 1 63 -1.86 down 1 0 0/1 -1.86 1 63 -1.86 -1.86 LSM7 0.5390625 -1.86 down yes 0.001 PTC;FVPTC FA;HN 32 31 publication 15087409 16 24 1219 54065 C21orf51 chromosome 21 open reading frame 51 Gene_symbol_2_NCBI_Entrez 1 1 63 -1.6 down 1 0 0/1 -1.6 1 63 -1.60 -1.60 C21orf51 0.623762376 -1.60 down 0.02 PTC;FVPTC FA;HN 32 31 publication 15087409 16 24 1240 54462 KIAA1128 KIAA1128 Gene_symbol_2_NCBI_Entrez 1 1 63 -1.96 down 1 0 0/1 -1.96 1 63 -1.96 -1.96 KIAA1128 0.511363636 -1.96 down yes 0.03 PTC;FVPTC FA;HN 32 31 publication 15087409 16 24 1230 54969 FLJ20534 hypothetical protein FLJ20534 Gene_symbol_2_NCBI_Entrez 1 1 63 -1.8 down 1 0 0/1 -1.8 1 63 -1.80 -1.80 FLJ20534 0.556701031 -1.80 down 0.02 PTC;FVPTC FA;HN 32 31 publication 15087409 9 14 647 55084 FLJ10159 hypothetical protein FLJ10159 affy_probe_2_Entrez 1 1 24 3.17 up 1 0 1/0 3.17 1 24 3.17 3.17 218974_at 218974_at hypothetical protein FLJ10159 -3.17 3.17 up 0.000017 FA FTC 12 12 provided by authors 15713710 15 22 1046 55160 ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like Gene_symbol_2_NCBI_Synonym_2_Entrez 1 1 7 -2.5 down 1 0 0/1 -2.5 1 7 -2.50 -2.50 Highly similar to rho guanyl nucleotide exchange factor FLJ10521 0.4 -2.50 down FTC FA 3 4 publication 15475448 16 24 1213 55364 IMPACT hypothetical protein IMPACT Gene_symbol_2_NCBI_Entrez 1 1 63 -1.53 down 1 0 0/1 -1.53 1 63 -1.53 -1.53 IMPACT 0.651515152 -1.53 down yes 0.03 PTC;FVPTC FA;HN 32 31 publication 15087409 13 20 868 55643 BTBD2 BTB (POZ) domain containing 2 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 W68046 W68046 BTB domain containing 2 BTBD2 up FTC FA 9 10 publication 12738736 16 24 1212 55650 PIGV phosphatidylinositol glycan, class V Gene_symbol_2_NCBI_Synonym_2_Entrez 1 1 63 -1.53 down 1 0 0/1 -1.53 1 63 -1.53 -1.53 FLJ20477 0.655172414 -1.53 down 0.0001 PTC;FVPTC FA;HN 32 31 publication 15087409 13 20 938 55830 GLT8D1 glycosyltransferase 8 domain containing 1 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 82 -1.87 down 2 0 0/2 -1.87 1 63 -1.87 -1.87 L13435 L13435 Glucosyltransferase AD-017 AD017 down FTC FA 9 10 publication 12738736 16 24 1234 55830 GLT8D1 glycosyltransferase 8 domain containing 1 Gene_symbol_2_NCBI_Synonym_2_Entrez 2 2 82 -1.87 down 2 0 0/2 -1.87 1 63 -1.87 -1.87 AD-017 0.535031847 -1.87 down 0.01 PTC;FVPTC FA;HN 32 31 publication 15087409 9 14 681 55885 LMO3 LIM domain only 3 (rhombotin-like 2) affy_probe_2_Entrez 1 1 24 4 up 1 0 1/0 4 1 24 4 4 204424_s_at 204424_s_at neuronal specific transcription factor DAT1 -4 4 up 0.003594 FA FTC 12 12 provided by authors 15713710 13 20 886 56255 DJ971N18.2 hypothetical protein DJ971N18.2 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 AL021396 AL021396 Hypothetical protein DJ971N18.2 up FTC FA 9 10 publication 12738736 16 24 1209 56943 ENY2 enhancer of yellow 2 homolog (Drosophila) Gene_symbol_2_NCBI_Synonym_2_Entrez 1 1 63 -1.47 down 1 0 0/1 -1.47 1 63 -1.47 -1.47 DC6 0.680672269 -1.47 down 0.04 PTC;FVPTC FA;HN 32 31 publication 15087409 9 14 616 57460 PPM1H protein phosphatase 1H (PP2C domain containing) affy_probe_2_Entrez 1 1 24 -2.71 down 1 0 0/1 -2.71 1 24 -2.71 -2.71 212686_at 212686_at KIAA1157 protein 2.71 -2.71 down 0.000065 FA FTC 12 12 provided by authors 15713710 9 14 618 57509 MTUS1 mitochondrial tumor suppressor 1 affy_probe_2_Entrez 1 1 24 2.71 up 1 0 1/0 2.71 1 24 2.71 2.71 212096_s_at 212096_s_at AT2 receptor-interacting protein 1 -2.71 2.71 up 0.000493 FA FTC 12 12 provided by authors 15713710 9 14 619 57599 WDR48 WD repeat domain 48 affy_probe_2_Entrez 1 1 24 2.72 up 1 0 1/0 2.72 1 24 2.72 2.72 221735_at 221735_at WD repeat endosomal protein -2.72 2.72 up 0.000016 FA FTC 12 12 provided by authors 15713710 16 24 1214 58497 PRUNE prune homolog (Drosophila) Gene_symbol_2_NCBI_Synonym_2_Entrez 1 1 63 -1.56 down 1 0 0/1 -1.56 1 63 -1.56 -1.56 HTCD37 0.639344262 -1.56 down 0.01 PTC;FVPTC FA;HN 32 31 publication 15087409 9 14 672 58517 RBM25 RNA binding motif protein 25 affy_probe_2_Entrez 1 1 24 3.75 up 1 0 1/0 3.75 1 24 3.75 3.75 212030_at 212030_at S164 protein -3.75 3.75 up 0.000038 FA FTC 12 12 provided by authors 15713710 15 22 1051 63826 SRR serine racemase Gene_symbol_2_NCBI_Entrez 1 1 7 -3.33 down 1 0 0/1 -3.33 1 7 -3.33 -3.33 Serine racemase SRR 0.3 -3.33 down FTC FA 3 4 publication 15475448 9 14 622 64778 FNDC3B fibronectin type III domain containing 3B affy_probe_2_Entrez 1 1 24 2.77 up 1 0 1/0 2.77 1 24 2.77 2.77 218618_s_at 218618_s_at hypothetical protein FLJ23399 -2.77 2.77 up 0.000021 FA FTC 12 12 provided by authors 15713710 13 20 887 79017 C7orf24 chromosome 7 open reading frame 24 clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 AI620381 AI620381 Hypothetical protein MCG3077 McG3077 up FTC FA 9 10 publication 12738736 9 14 683 79695 GALNT12 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12) affy_probe_2_Entrez 1 1 24 4.14 up 1 0 1/0 4.14 1 24 4.14 4.14 218885_s_at 218885_s_at hypothetical protein FLJ21212 -4.14 4.14 up 0.000078 FA FTC 12 12 provided by authors 15713710 9 14 692 80204 FBXO11 F-box protein 11 affy_probe_2_Entrez 1 1 24 5 up 1 0 1/0 5 1 24 5 5 222119_s_at 222119_s_at vitiligo-associated protein VIT-1 -5 5 up 0.000029 FA FTC 12 12 provided by authors 15713710 9 14 682 80778 ZNF34 zinc finger protein 34 (KOX 32) affy_probe_2_Entrez 1 1 24 4.04 up 1 0 1/0 4.04 1 24 4.04 4.04 219801_at 219801_at hypothetical protein MGC10520 -4.04 4.04 up 0.000003 FA FTC 12 12 provided by authors 15713710 16 24 1236 81689 HBLD2 HESB like domain containing 2 Gene_symbol_2_NCBI_Synonym_2_Entrez 1 1 63 -1.89 down 1 0 0/1 -1.89 1 63 -1.89 -1.89 MGC4276 0.529411765 -1.89 down 0.0001 PTC;FVPTC FA;HN 32 31 publication 15087409 15 22 1058 81706 PPP1R14C protein phosphatase 1, regulatory (inhibitor) subunit 14C Gene_symbol_2_NCBI_Entrez 1 1 7 -5 down 1 0 0/1 -5 1 7 -5.00 -5.00 Protein phosphatase 1 regulatory (inhibitor) subunit 14C PPP1R14C 0.2 -5.00 down FTC FA 3 4 publication 15475448 9 14 638 83483 PLVAP plasmalemma vesicle associated protein affy_probe_2_Entrez 1 1 24 3.09 up 1 0 1/0 3.09 1 24 3.09 3.09 221529_s_at 221529_s_at plasmalemma vesicle associated protein -3.09 3.09 up 0.000263 FA FTC 12 12 provided by authors 15713710 18 31 1358 84864 MINA MYC induced nuclear antigen clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 59 -2.4 down 1 0 0/1 -2.4 1 59 -2.40 -2.40 W27666 W27666 Mina53, a novel Myc target gene MINA53 2.4 -2.40 down FTC;PTC;FVPTC FA;HN 33 26 publication NOTE: This study seems very similar to Study #7 and may contain overlap in the tissue samples used. Waiting for author response on this matter. 15319714 9 14 685 140597 TCEAL2 transcription elongation factor A (SII)-like 2 affy_probe_2_Entrez 1 1 24 4.29 up 1 0 1/0 4.29 1 24 4.29 4.29 211276_at 211276_at my048 protein -4.29 4.29 up 0.003021 FA FTC 12 12 provided by authors 15713710 13 20 942 169611 OLFML2A olfactomedin-like 2A clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 down 1 0 0/1 0 0 0 0 0 AL050002 AL050002 IMAGE clone 3140802 down FTC FA 9 10 publication 12738736 9 14 624 220988 HNRPA3 heterogeneous nuclear ribonucleoprotein A3 affy_probe_2_Entrez 1 1 24 2.82 up 1 0 1/0 2.82 1 24 2.82 2.82 211930_at 211930_at Homo sapiens mRNA; cDNA DKFZp686N1377 (from clone DKFZp686N1377) -2.82 2.82 up 0.00002 FA FTC 12 12 provided by authors 15713710 13 20 950 221395 GPR116 G protein-coupled receptor 116 clone_accession_2_NCBI_rna_accession_2_Entrez 2 2 43 3.08 even 1 1 1/1 3.08 1 24 3.08 3.08 AB018301 AB018301 KIAA0758 protein KIAA0758 down FTC FA 9 10 publication 12738736 9 14 636 221395 GPR116 G protein-coupled receptor 116 affy_probe_2_Entrez 2 2 43 3.08 even 1 1 1/1 3.08 1 24 3.08 3.08 212950_at 212950_at KIAA0758 protein -3.08 3.08 up 0.000297 FA FTC 12 12 provided by authors 15713710 13 20 885 283131 TncRNA trophoblast-derived noncoding RNA clone_accession_2_NCBI_rna_accession_2_Entrez 1 1 19 0 up 1 0 1/0 0 0 0 0 0 AW006742 AW006742 Human clone 137308 mRNA partial cds up FTC FA 9 10 publication 12738736 10 16 725 399563 FLJ43806 hypothetical protein FLJ43806 affy_probe_2_Entrez 1 1 14 -2.56 down 1 0 0/1 -2.56 1 14 -2.56 -2.56 37151_at 37151_at Clone 23836 mRNA sequence 20 -2.56 -2.56 down no PTC GT 8 6 publication 15515157 9 14 645 439921 MXRA7 matrix-remodelling associated 7 affy_probe_2_Entrez 1 1 24 3.15 up 1 0 1/0 3.15 1 24 3.15 3.15 212509_s_at 212509_s_at ESTs, Weakly similar to hypothetical protein FLJ22184 [Homo sapiens] [H.sapiens] -3.15 3.15 up 0.000001 FA FTC 12 12 provided by authors 15713710 10 16 720 439957 LOC439957 similar to Ig kappa chain V region (Z4) - human affy_probe_2_Entrez 1 1 14 -2.23 down 1 0 0/1 -2.23 1 14 -2.23 -2.23 31386_at 31386_at Human kappa immunoglobulin IGK -2.23 -2.23 down yes PTC GT 8 6 publication 15515157