Basic Statistics
Measure | Value |
---|---|
Filename | HMT5HCCXX_8_AGCATC_1_chastity_passed.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 450692397 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GATCGGA | 167135 | 0.0 | 9.113961 | 1 |
ATCGGAA | 195935 | 0.0 | 7.8909326 | 2 |
TCGGAAG | 208985 | 0.0 | 7.4290547 | 3 |
CGGAAGA | 230175 | 0.0 | 6.7701697 | 4 |